transcript:BL95422_evm1 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL95422_evm1
Unique Nametranscript:BL95422_evm1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL95422_evm1

>transcript:BL95422_evm1-protein ID=transcript:BL95422_evm1-protein|Name=transcript:BL95422_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=141bp
MAEAAFNKHDVNKDGKMSSAELKAALEELNVKPSDALLQAILVQYDKAPQ
NGVLELNEFKNLVADMQAIQTAKREEVLDTFTTFDKDKSGFIEPGELKEV
LKSLNMGNDDATVQAMMAIADTDKDGKVSITEFANIIGHGE
Run BLAST on NCBI

mRNA from alignment at Sc0000039:1188003..1189009-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL95422_evm1 ID=transcript:BL95422_evm1|Name=transcript:BL95422_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=1007bp|location=Sequence derived from alignment at Sc0000039:1188003..1189009- (Branchiostoma lanceolatum)
ATGGCAGAAGCGGCTTTCAACAAGCATGACGTCAACAAAGACGGCAAAAT GAGCTCCGCAGAGCTGAAGGCAGCGCTGGAAGAGCTGAATGTGAAACCCA GCGATGCTCTTCTTCAGGTAAGACATTGCAATTGGTGAACACGACATCTG CTTGTAACAATTTAACGTTCCAACAAACTGTGTGCTTATGGGATGTCCCT GTAGCTCAGCTGGCAACAGCCTCAAAGTTGAGCTCCAGTTCCAATAAAAG TTAGTAACAGGGAAACCCCAGTTCGACCCTAGGAAGGGTATCTAGGTTGG GGTTGCACCTGTGTTTCGGAAGGGACGTAAAATGGGGGTCCCGTGTTCGA GGAGGTGCCTCGAGCATGTTGAAGGGAAAGTGGTAGCAACAGCAAAGAAA CTTTTTGCCCTATGTGCCACTAGGCACTACAAGGGTCTTAACGAAACTGT GCATGGTGTCTGCATGCAGACAACGTTACAAAATAGAACATTCAATTTAA CACCAGTTCATTACGCCCCCAGGCGATCTTGGTGCAGTATGACAAGGCAC CCCAAAATGGCGTTCTGGAGTTGAATGAGTTCAAGAACCTGGTAGCTGAC ATGCAAGCCATCCAAACTGCTAAGCGTGAGGAAGTCCTCGATACTTTTAC CACCTTTGACAAGGTATGACAGCAACAAAACTGTAGTGCCTAATTAAAAT GTTACGTACTCAACTTGCAATTGTATTGACTTGTTTTTTGTTTGTTTTTT GTTTAGTGCTAAAATCCATACAAAAGTCGTTATTCTTTTGTTGTGTCAAT AAACTTATAGATTAAGTGTAAACTTGACCCTATTTACAGGATAAGAGTGG TTTCATCGAGCCTGGTGAGTTGAAAGAAGTGTTAAAGTCGCTCAACATGG GAAATGACGACGCCACTGTCCAGGCCATGATGGCCATTGCTGACACGGAC AAAGACGGCAAAGTCAGCATCACCGAGTTTGCTAACATCATCGGCCATGG AGAGTAG

Coding sequence (CDS) from alignment at Sc0000039:1188003..1189009-

>transcript:BL95422_evm1 ID=transcript:BL95422_evm1|Name=transcript:BL95422_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=1278bp|location=Sequence derived from alignment at Sc0000039:1188003..1189009- (Branchiostoma lanceolatum)
ATGGCAGAAGCGGCTTTCAACAAGCATGACGTCAACAAAGACGGCAAAAT
GAGCTCCGCAGAGCTGAAGGCAGCGCTGGAAGAGCTGAATGTGAAACCCA
GCGATGCTCTTCTTCAGGCGATCTTGGTGCAGTATGACAAGGCACCCCAA
AATGGCGTTCTGGAGTTGAATGAGTTCAAGAACCTGGTAGCTGACATGCA
AGCCATCCAAACTGCTAAGCGTGAGGAAGTCCTCGATACTTTTACCACCT
TTGACAAGGATAAGAGTGGTTTCATCGAGCCTGGTGAGTTGAAAGAAGTG
TTAAAGTCGCTCAACATGGGAAATGACGACGCCACTGTCCAGGCCATGAT
GGCCATTGCTGACACGGACAAAGACGGCAAAGTCAGCATCACCGAGTTTG
CTAACATCATCGGCCATGGAGAGTAGATGGCAGAAGCGGCTTTCAACAAG
CATGACGTCAACAAAGACGGCAAAATGAGCTCCGCAGAGCTGAAGGCAGC
GCTGGAAGAGCTGAATGTGAAACCCAGCGATGCTCTTCTTCAGGCGATCT
TGGTGCAGTATGACAAGGCACCCCAAAATGGCGTTCTGGAGTTGAATGAG
TTCAAGAACCTGGTAGCTGACATGCAAGCCATCCAAACTGCTAAGCGTGA
GGAAGTCCTCGATACTTTTACCACCTTTGACAAGGATAAGAGTGGTTTCA
TCGAGCCTGGTGAGTTGAAAGAAGTGTTAAAGTCGCTCAACATGGGAAAT
GACGACGCCACTGTCCAGGCCATGATGGCCATTGCTGACACGGACAAAGA
CGGCAAAGTCAGCATCACCGAGTTTGCTAACATCATCGGCCATGGAGAGT
AGATGGCAGAAGCGGCTTTCAACAAGCATGACGTCAACAAAGACGGCAAA
ATGAGCTCCGCAGAGCTGAAGGCAGCGCTGGAAGAGCTGAATGTGAAACC
CAGCGATGCTCTTCTTCAGGCGATCTTGGTGCAGTATGACAAGGCACCCC
AAAATGGCGTTCTGGAGTTGAATGAGTTCAAGAACCTGGTAGCTGACATG
CAAGCCATCCAAACTGCTAAGCGTGAGGAAGTCCTCGATACTTTTACCAC
CTTTGACAAGGATAAGAGTGGTTTCATCGAGCCTGGTGAGTTGAAAGAAG
TGTTAAAGTCGCTCAACATGGGAAATGACGACGCCACTGTCCAGGCCATG
ATGGCCATTGCTGACACGGACAAAGACGGCAAAGTCAGCATCACCGAGTT
TGCTAACATCATCGGCCATGGAGAGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL95422gene:BL95422Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL95422_evm1-E1BL95422_evm1-E1-1564476830-200720Branchiostoma lanceolatumexon
BL95422_evm1-E2BL95422_evm1-E2-1564476830-200718Branchiostoma lanceolatumexon
BL95422_evm1-E3BL95422_evm1-E3-1564476830-200716Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL95422_evm1transcript:BL95422_evm1-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000039genomeSc0000039:1188003..1189009 -
Properties
Property NameValue
Transcript idBL95422_evm1
Biotypeprotein_coding