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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95831_evm2 >transcript:BL95831_evm2-protein ID=transcript:BL95831_evm2-protein|Name=transcript:BL95831_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=530bp
MFTSGYAEVKQESIIIKDVSEVAMATILDYAYTGCLQMEPDQVQTVMSAA
RLLQVDFVYNKASIYMKDKLDMSNCVEMLMYADMLGDLTLQEASRRFIAS
RINQMSLQPSFLQLSLAQLQPLLNRDDLISRSEDSIVQVALRWIKFDQEE
RVQHLPALCRCFRHSFISADQLVELESKCPSTDSKLVYSDSTTQRLGQTG
TEMQIFLRENTPNVNFHCHTPCYDPSTGMSYTMNLPLTRDGFSVAVTPDD
ELYLAGRAYVRDASKSEHDFFQYNHLLNSWESRCGMITPKTSCVLVYLNG
YLYAIGGDNMYQTAERYDPSCDEWTSIAPMPSPISSELCAVTLDDSIYII
SNEGCYSFSTIENRWRKTKDMNEPPNMPQAVTYKGCIYCMDRSDLCYVEK
YNPTNDTWECLGEYMPPEYDDAILMLYEGSLYLLVIHSKGAFCGFYVRPR
WSAVKKYDLFQYQEETKSWQKSESTGMIATPITQFLDVNANTVCVVAKMI
KTCLDRPESNKHLEVPSSEEDNDSDEELLD Run BLAST on NCBI mRNA from alignment at Sc0000153:320412..323091- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95831_evm2 ID=transcript:BL95831_evm2|Name=transcript:BL95831_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=2680bp|location=Sequence derived from alignment at Sc0000153:320412..323091- (Branchiostoma lanceolatum)
ATGTTCACCAGCGGCTATGCAGAGGTCAAACAGGAAAGCATTATTATCAA
GGATGTGAGTGAGGTAGCCATGGCAACCATTTTGGACTACGCCTACACCG
GCTGTCTTCAGATGGAGCCAGACCAGGTCCAGACTGTGATGTCTGCAGCC
AGACTGCTGCAGGTAACGACCTATAATTATTAATTAGAAATCAACCTTAA
AAAGCTTCTAAGTTTTAGTACATGTTAGTTCACCGTTACCTCAAACAAAG
TAGTTGCTTGGCTTTCATACCATCCATTTATGAAATAACTCCAGAATGCT
CTCTAAGTCTAACAGTCTAACTCTGTCTTTATACCCATAGGTGGATTTTG
TATACAATAAAGCATCAATATACATGAAAGACAAGCTTGACATGTCCAAC
TGTGTAGAAATGTTGATGTATGCTGACATGCTGGGGGACCTCACCTTACA
AGAGGCCAGTAGGAGGTTCATCGCATCCAGGTCAGTCTGATGTTTATAAC
AGAGTTTAGTTATTGATGCAGCTCTCAATGAACATACCGTGGTAAAGTGA
AAACCTGAAGGTGTGAGATAAAGCAAACTATGCACAGAGGGATGAAACTT
TTAAGCCTTTAAAAAGCTTTCCAACATGTAGTTTCCCAAATCATCATGTG
GAATGAAATATCAGTATTAAAACAGTTTCTAATGTTTAGATGAAGACTAT
GAGGCCTGAGGCTGTTCCTTATGTCTGCATTTCTCTACGTACATTTCAGT
ACAGTTCACCCAGGGAACTAAATTACATGTACATGTACCTGTTGCTTTAC
AGACAAATATTATCTTTTTGCCAACCTCTCAACCTAACTGGCAAACAAAC
AAAATCATACATCTTTTAAGATTACAAAGAGGTTTCTTAATGTTCCAAAT
AGATTACGGTAGTCTAGACTATGGTTGTAATTATGAAATGTACAAAGAAG
TAAAATCAAATGTTAGTGAGAAGTGTTAGTTTTGAACATCTTGAAAACAT
TTTATTTTGTCAGGATCAACCAGATGTCTCTACAACCCTCCTTTCTCCAG
TTGTCTTTGGCTCAGCTCCAGCCATTGCTCAACAGGGACGATCTGATAAG
TCGCTCGGAGGACAGCATTGTCCAAGTTGCTCTAAGATGGATCAAATTTG
ACCAAGAAGAACGCGTGCAGCACCTTCCGGCCCTTTGCAGATGCTTCCGT
CATTCCTTCATCAGCGCAGACCAACTTGTGGAACTCGAGAGTAAGTGCCC
GTCAACAGACAGCAAGTTGGTTTACAGTGACAGCACAACCCAACGTCTTG
GACAGACAGGCACAGAAATGCAGATTTTCCTTAGAGAAAACACTCCTAAC
GTTAACTTCCATTGTCATACTCCTTGCTACGATCCTTCAACAGGCATGTC
GTACACAATGAATTTACCCCTTACTCGGGATGGCTTCTCGGTAGCAGTAA
CACCTGATGACGAGCTGTACTTGGCAGGACGTGCTTATGTTCGGGATGCG
TCAAAATCTGAACATGATTTTTTCCAGTACAATCACCTGCTAAACTCCTG
GGAATCCAGGTGTGGGATGATCACACCCAAGACCAGGTAGGTTTTTCCCA
TTCAAGCTGGTTTTCTTAAGGAGTGGGGAAATGACAGGAATTCCTGCATG
CTGCATAGCATTGAGATTATTTACACATAGTAAGAAAAATCTCCATCAGG
CAAGTCTTCACTCAGCTGCCATTATTCAATTTTGGGGGTTCATGAACAGA
AGAAATTAAGAATGAAACTGTGCATGGATTTTCATGAAGTTTGCTCGTTG
TGCGATGGAATTGGCTTTGACAGAAAATGCACATACCTGTGGAAGGGGTA
AAGCAAAACAAAAGGTCAAAAAATCTATCAAAACATTGATGTCAACTACA
GAAGGATAGGCTATTTGTTTGAATTGGTGTCAAAGTCTTTAGTAGCTTTG
CTTTTTCCCCAGCTGTGTCTTGGTGTACCTGAATGGTTACCTCTATGCCA
TTGGAGGTGACAACATGTATCAAACAGCAGAGAGGTACGACCCCAGCTGT
GATGAGTGGACGTCCATTGCACCTATGCCCAGTCCCATCTCCTCAGAACT
TTGTGCTGTTACCCTTGATGACAGCATCTACATCATCAGTAACGAAGGCT
GCTACAGTTTCAGTACCATAGAAAACAGGTGGAGAAAGACAAAAGACATG
AACGAACCTCCTAATATGCCTCAGGCAGTCACATACAAGGGCTGCATTTA
CTGTATGGACAGGTCAGACCTGTGTTATGTAGAGAAGTACAACCCAACAA
ATGACACATGGGAATGTTTAGGGGAGTACATGCCACCTGAGTATGATGAT
GCGATCTTAATGCTCTATGAAGGGTCTTTGTACCTCCTTGTCATACACTC
CAAAGGTGCCTTCTGTGGTTTCTATGTCCGCCCTCGATGGTCAGCAGTAA
AGAAGTATGACCTCTTCCAGTACCAAGAAGAGACAAAATCTTGGCAAAAG
TCAGAAAGTACAGGAATGATAGCTACCCCCATCACACAGTTCTTGGATGT
CAATGCTAACACTGTTTGTGTGGTGGCAAAGATGATTAAAACTTGTCTGG
ATCGCCCAGAATCAAACAAGCATCTGGAAGTTCCAAGCAGTGAAGAAGAC
AATGACAGTGATGAGGAGCTTTTGGATTAG Coding sequence (CDS) from alignment at Sc0000153:320412..323091- >transcript:BL95831_evm2 ID=transcript:BL95831_evm2|Name=transcript:BL95831_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=1593bp|location=Sequence derived from alignment at Sc0000153:320412..323091- (Branchiostoma lanceolatum)
ATGTTCACCAGCGGCTATGCAGAGGTCAAACAGGAAAGCATTATTATCAA
GGATGTGAGTGAGGTAGCCATGGCAACCATTTTGGACTACGCCTACACCG
GCTGTCTTCAGATGGAGCCAGACCAGGTCCAGACTGTGATGTCTGCAGCC
AGACTGCTGCAGGTGGATTTTGTATACAATAAAGCATCAATATACATGAA
AGACAAGCTTGACATGTCCAACTGTGTAGAAATGTTGATGTATGCTGACA
TGCTGGGGGACCTCACCTTACAAGAGGCCAGTAGGAGGTTCATCGCATCC
AGGATCAACCAGATGTCTCTACAACCCTCCTTTCTCCAGTTGTCTTTGGC
TCAGCTCCAGCCATTGCTCAACAGGGACGATCTGATAAGTCGCTCGGAGG
ACAGCATTGTCCAAGTTGCTCTAAGATGGATCAAATTTGACCAAGAAGAA
CGCGTGCAGCACCTTCCGGCCCTTTGCAGATGCTTCCGTCATTCCTTCAT
CAGCGCAGACCAACTTGTGGAACTCGAGAGTAAGTGCCCGTCAACAGACA
GCAAGTTGGTTTACAGTGACAGCACAACCCAACGTCTTGGACAGACAGGC
ACAGAAATGCAGATTTTCCTTAGAGAAAACACTCCTAACGTTAACTTCCA
TTGTCATACTCCTTGCTACGATCCTTCAACAGGCATGTCGTACACAATGA
ATTTACCCCTTACTCGGGATGGCTTCTCGGTAGCAGTAACACCTGATGAC
GAGCTGTACTTGGCAGGACGTGCTTATGTTCGGGATGCGTCAAAATCTGA
ACATGATTTTTTCCAGTACAATCACCTGCTAAACTCCTGGGAATCCAGGT
GTGGGATGATCACACCCAAGACCAGCTGTGTCTTGGTGTACCTGAATGGT
TACCTCTATGCCATTGGAGGTGACAACATGTATCAAACAGCAGAGAGGTA
CGACCCCAGCTGTGATGAGTGGACGTCCATTGCACCTATGCCCAGTCCCA
TCTCCTCAGAACTTTGTGCTGTTACCCTTGATGACAGCATCTACATCATC
AGTAACGAAGGCTGCTACAGTTTCAGTACCATAGAAAACAGGTGGAGAAA
GACAAAAGACATGAACGAACCTCCTAATATGCCTCAGGCAGTCACATACA
AGGGCTGCATTTACTGTATGGACAGGTCAGACCTGTGTTATGTAGAGAAG
TACAACCCAACAAATGACACATGGGAATGTTTAGGGGAGTACATGCCACC
TGAGTATGATGATGCGATCTTAATGCTCTATGAAGGGTCTTTGTACCTCC
TTGTCATACACTCCAAAGGTGCCTTCTGTGGTTTCTATGTCCGCCCTCGA
TGGTCAGCAGTAAAGAAGTATGACCTCTTCCAGTACCAAGAAGAGACAAA
ATCTTGGCAAAAGTCAGAAAGTACAGGAATGATAGCTACCCCCATCACAC
AGTTCTTGGATGTCAATGCTAACACTGTTTGTGTGGTGGCAAAGATGATT
AAAACTTGTCTGGATCGCCCAGAATCAAACAAGCATCTGGAAGTTCCAAG
CAGTGAAGAAGACAATGACAGTGATGAGGAGCTTTTGGATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000153 | genome | Sc0000153:320412..323091 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95831_evm2 |
| Biotype | protein_coding |
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