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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95831_evm2 >transcript:BL95831_evm2-protein ID=transcript:BL95831_evm2-protein|Name=transcript:BL95831_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=530bp
MFTSGYAEVKQESIIIKDVSEVAMATILDYAYTGCLQMEPDQVQTVMSAA
RLLQVDFVYNKASIYMKDKLDMSNCVEMLMYADMLGDLTLQEASRRFIAS
RINQMSLQPSFLQLSLAQLQPLLNRDDLISRSEDSIVQVALRWIKFDQEE
RVQHLPALCRCFRHSFISADQLVELESKCPSTDSKLVYSDSTTQRLGQTG
TEMQIFLRENTPNVNFHCHTPCYDPSTGMSYTMNLPLTRDGFSVAVTPDD
ELYLAGRAYVRDASKSEHDFFQYNHLLNSWESRCGMITPKTSCVLVYLNG
YLYAIGGDNMYQTAERYDPSCDEWTSIAPMPSPISSELCAVTLDDSIYII
SNEGCYSFSTIENRWRKTKDMNEPPNMPQAVTYKGCIYCMDRSDLCYVEK
YNPTNDTWECLGEYMPPEYDDAILMLYEGSLYLLVIHSKGAFCGFYVRPR
WSAVKKYDLFQYQEETKSWQKSESTGMIATPITQFLDVNANTVCVVAKMI
KTCLDRPESNKHLEVPSSEEDNDSDEELLD Run BLAST on NCBI mRNA from alignment at Sc0000153:320412..323091- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95831_evm2 ID=transcript:BL95831_evm2|Name=transcript:BL95831_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=2680bp|location=Sequence derived from alignment at Sc0000153:320412..323091- (Branchiostoma lanceolatum)
ATGTTCACCAGCGGCTATGCAGAGGTCAAACAGGAAAGCATTATTATCAA
GGATGTGAGTGAGGTAGCCATGGCAACCATTTTGGACTACGCCTACACCG
GCTGTCTTCAGATGGAGCCAGACCAGGTCCAGACTGTGATGTCTGCAGCC
AGACTGCTGCAGGTAACGACCTATAATTATTAATTAGAAATCAACCTTAA
AAAGCTTCTAAGTTTTAGTACATGTTAGTTCACCGTTACCTCAAACAAAG
TAGTTGCTTGGCTTTCATACCATCCATTTATGAAATAACTCCAGAATGCT
CTCTAAGTCTAACAGTCTAACTCTGTCTTTATACCCATAGGTGGATTTTG
TATACAATAAAGCATCAATATACATGAAAGACAAGCTTGACATGTCCAAC
TGTGTAGAAATGTTGATGTATGCTGACATGCTGGGGGACCTCACCTTACA
AGAGGCCAGTAGGAGGTTCATCGCATCCAGGTCAGTCTGATGTTTATAAC
AGAGTTTAGTTATTGATGCAGCTCTCAATGAACATACCGTGGTAAAGTGA
AAACCTGAAGGTGTGAGATAAAGCAAACTATGCACAGAGGGATGAAACTT
TTAAGCCTTTAAAAAGCTTTCCAACATGTAGTTTCCCAAATCATCATGTG
GAATGAAATATCAGTATTAAAACAGTTTCTAATGTTTAGATGAAGACTAT
GAGGCCTGAGGCTGTTCCTTATGTCTGCATTTCTCTACGTACATTTCAGT
ACAGTTCACCCAGGGAACTAAATTACATGTACATGTACCTGTTGCTTTAC
AGACAAATATTATCTTTTTGCCAACCTCTCAACCTAACTGGCAAACAAAC
AAAATCATACATCTTTTAAGATTACAAAGAGGTTTCTTAATGTTCCAAAT
AGATTACGGTAGTCTAGACTATGGTTGTAATTATGAAATGTACAAAGAAG
TAAAATCAAATGTTAGTGAGAAGTGTTAGTTTTGAACATCTTGAAAACAT
TTTATTTTGTCAGGATCAACCAGATGTCTCTACAACCCTCCTTTCTCCAG
TTGTCTTTGGCTCAGCTCCAGCCATTGCTCAACAGGGACGATCTGATAAG
TCGCTCGGAGGACAGCATTGTCCAAGTTGCTCTAAGATGGATCAAATTTG
ACCAAGAAGAACGCGTGCAGCACCTTCCGGCCCTTTGCAGATGCTTCCGT
CATTCCTTCATCAGCGCAGACCAACTTGTGGAACTCGAGAGTAAGTGCCC
GTCAACAGACAGCAAGTTGGTTTACAGTGACAGCACAACCCAACGTCTTG
GACAGACAGGCACAGAAATGCAGATTTTCCTTAGAGAAAACACTCCTAAC
GTTAACTTCCATTGTCATACTCCTTGCTACGATCCTTCAACAGGCATGTC
GTACACAATGAATTTACCCCTTACTCGGGATGGCTTCTCGGTAGCAGTAA
CACCTGATGACGAGCTGTACTTGGCAGGACGTGCTTATGTTCGGGATGCG
TCAAAATCTGAACATGATTTTTTCCAGTACAATCACCTGCTAAACTCCTG
GGAATCCAGGTGTGGGATGATCACACCCAAGACCAGGTAGGTTTTTCCCA
TTCAAGCTGGTTTTCTTAAGGAGTGGGGAAATGACAGGAATTCCTGCATG
CTGCATAGCATTGAGATTATTTACACATAGTAAGAAAAATCTCCATCAGG
CAAGTCTTCACTCAGCTGCCATTATTCAATTTTGGGGGTTCATGAACAGA
AGAAATTAAGAATGAAACTGTGCATGGATTTTCATGAAGTTTGCTCGTTG
TGCGATGGAATTGGCTTTGACAGAAAATGCACATACCTGTGGAAGGGGTA
AAGCAAAACAAAAGGTCAAAAAATCTATCAAAACATTGATGTCAACTACA
GAAGGATAGGCTATTTGTTTGAATTGGTGTCAAAGTCTTTAGTAGCTTTG
CTTTTTCCCCAGCTGTGTCTTGGTGTACCTGAATGGTTACCTCTATGCCA
TTGGAGGTGACAACATGTATCAAACAGCAGAGAGGTACGACCCCAGCTGT
GATGAGTGGACGTCCATTGCACCTATGCCCAGTCCCATCTCCTCAGAACT
TTGTGCTGTTACCCTTGATGACAGCATCTACATCATCAGTAACGAAGGCT
GCTACAGTTTCAGTACCATAGAAAACAGGTGGAGAAAGACAAAAGACATG
AACGAACCTCCTAATATGCCTCAGGCAGTCACATACAAGGGCTGCATTTA
CTGTATGGACAGGTCAGACCTGTGTTATGTAGAGAAGTACAACCCAACAA
ATGACACATGGGAATGTTTAGGGGAGTACATGCCACCTGAGTATGATGAT
GCGATCTTAATGCTCTATGAAGGGTCTTTGTACCTCCTTGTCATACACTC
CAAAGGTGCCTTCTGTGGTTTCTATGTCCGCCCTCGATGGTCAGCAGTAA
AGAAGTATGACCTCTTCCAGTACCAAGAAGAGACAAAATCTTGGCAAAAG
TCAGAAAGTACAGGAATGATAGCTACCCCCATCACACAGTTCTTGGATGT
CAATGCTAACACTGTTTGTGTGGTGGCAAAGATGATTAAAACTTGTCTGG
ATCGCCCAGAATCAAACAAGCATCTGGAAGTTCCAAGCAGTGAAGAAGAC
AATGACAGTGATGAGGAGCTTTTGGATTAG Coding sequence (CDS) from alignment at Sc0000153:320412..323091- >transcript:BL95831_evm2 ID=transcript:BL95831_evm2|Name=transcript:BL95831_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=6372bp|location=Sequence derived from alignment at Sc0000153:320412..323091- (Branchiostoma lanceolatum)
ATGTTCACCAGCGGCTATGCAGAGGTCAAACAGGAAAGCATTATTATCAA
GGATGTGAGTGAGGTAGCCATGGCAACCATTTTGGACTACGCCTACACCG
GCTGTCTTCAGATGGAGCCAGACCAGGTCCAGACTGTGATGTCTGCAGCC
AGACTGCTGCAGGTGGATTTTGTATACAATAAAGCATCAATATACATGAA
AGACAAGCTTGACATGTCCAACTGTGTAGAAATGTTGATGTATGCTGACA
TGCTGGGGGACCTCACCTTACAAGAGGCCAGTAGGAGGTTCATCGCATCC
AGGATCAACCAGATGTCTCTACAACCCTCCTTTCTCCAGTTGTCTTTGGC
TCAGCTCCAGCCATTGCTCAACAGGGACGATCTGATAAGTCGCTCGGAGG
ACAGCATTGTCCAAGTTGCTCTAAGATGGATCAAATTTGACCAAGAAGAA
CGCGTGCAGCACCTTCCGGCCCTTTGCAGATGCTTCCGTCATTCCTTCAT
CAGCGCAGACCAACTTGTGGAACTCGAGAGTAAGTGCCCGTCAACAGACA
GCAAGTTGGTTTACAGTGACAGCACAACCCAACGTCTTGGACAGACAGGC
ACAGAAATGCAGATTTTCCTTAGAGAAAACACTCCTAACGTTAACTTCCA
TTGTCATACTCCTTGCTACGATCCTTCAACAGGCATGTCGTACACAATGA
ATTTACCCCTTACTCGGGATGGCTTCTCGGTAGCAGTAACACCTGATGAC
GAGCTGTACTTGGCAGGACGTGCTTATGTTCGGGATGCGTCAAAATCTGA
ACATGATTTTTTCCAGTACAATCACCTGCTAAACTCCTGGGAATCCAGGT
GTGGGATGATCACACCCAAGACCAGCTGTGTCTTGGTGTACCTGAATGGT
TACCTCTATGCCATTGGAGGTGACAACATGTATCAAACAGCAGAGAGGTA
CGACCCCAGCTGTGATGAGTGGACGTCCATTGCACCTATGCCCAGTCCCA
TCTCCTCAGAACTTTGTGCTGTTACCCTTGATGACAGCATCTACATCATC
AGTAACGAAGGCTGCTACAGTTTCAGTACCATAGAAAACAGGTGGAGAAA
GACAAAAGACATGAACGAACCTCCTAATATGCCTCAGGCAGTCACATACA
AGGGCTGCATTTACTGTATGGACAGGTCAGACCTGTGTTATGTAGAGAAG
TACAACCCAACAAATGACACATGGGAATGTTTAGGGGAGTACATGCCACC
TGAGTATGATGATGCGATCTTAATGCTCTATGAAGGGTCTTTGTACCTCC
TTGTCATACACTCCAAAGGTGCCTTCTGTGGTTTCTATGTCCGCCCTCGA
TGGTCAGCAGTAAAGAAGTATGACCTCTTCCAGTACCAAGAAGAGACAAA
ATCTTGGCAAAAGTCAGAAAGTACAGGAATGATAGCTACCCCCATCACAC
AGTTCTTGGATGTCAATGCTAACACTGTTTGTGTGGTGGCAAAGATGATT
AAAACTTGTCTGGATCGCCCAGAATCAAACAAGCATCTGGAAGTTCCAAG
CAGTGAAGAAGACAATGACAGTGATGAGGAGCTTTTGGATTAGATGTTCA
CCAGCGGCTATGCAGAGGTCAAACAGGAAAGCATTATTATCAAGGATGTG
AGTGAGGTAGCCATGGCAACCATTTTGGACTACGCCTACACCGGCTGTCT
TCAGATGGAGCCAGACCAGGTCCAGACTGTGATGTCTGCAGCCAGACTGC
TGCAGGTGGATTTTGTATACAATAAAGCATCAATATACATGAAAGACAAG
CTTGACATGTCCAACTGTGTAGAAATGTTGATGTATGCTGACATGCTGGG
GGACCTCACCTTACAAGAGGCCAGTAGGAGGTTCATCGCATCCAGGATCA
ACCAGATGTCTCTACAACCCTCCTTTCTCCAGTTGTCTTTGGCTCAGCTC
CAGCCATTGCTCAACAGGGACGATCTGATAAGTCGCTCGGAGGACAGCAT
TGTCCAAGTTGCTCTAAGATGGATCAAATTTGACCAAGAAGAACGCGTGC
AGCACCTTCCGGCCCTTTGCAGATGCTTCCGTCATTCCTTCATCAGCGCA
GACCAACTTGTGGAACTCGAGAGTAAGTGCCCGTCAACAGACAGCAAGTT
GGTTTACAGTGACAGCACAACCCAACGTCTTGGACAGACAGGCACAGAAA
TGCAGATTTTCCTTAGAGAAAACACTCCTAACGTTAACTTCCATTGTCAT
ACTCCTTGCTACGATCCTTCAACAGGCATGTCGTACACAATGAATTTACC
CCTTACTCGGGATGGCTTCTCGGTAGCAGTAACACCTGATGACGAGCTGT
ACTTGGCAGGACGTGCTTATGTTCGGGATGCGTCAAAATCTGAACATGAT
TTTTTCCAGTACAATCACCTGCTAAACTCCTGGGAATCCAGGTGTGGGAT
GATCACACCCAAGACCAGCTGTGTCTTGGTGTACCTGAATGGTTACCTCT
ATGCCATTGGAGGTGACAACATGTATCAAACAGCAGAGAGGTACGACCCC
AGCTGTGATGAGTGGACGTCCATTGCACCTATGCCCAGTCCCATCTCCTC
AGAACTTTGTGCTGTTACCCTTGATGACAGCATCTACATCATCAGTAACG
AAGGCTGCTACAGTTTCAGTACCATAGAAAACAGGTGGAGAAAGACAAAA
GACATGAACGAACCTCCTAATATGCCTCAGGCAGTCACATACAAGGGCTG
CATTTACTGTATGGACAGGTCAGACCTGTGTTATGTAGAGAAGTACAACC
CAACAAATGACACATGGGAATGTTTAGGGGAGTACATGCCACCTGAGTAT
GATGATGCGATCTTAATGCTCTATGAAGGGTCTTTGTACCTCCTTGTCAT
ACACTCCAAAGGTGCCTTCTGTGGTTTCTATGTCCGCCCTCGATGGTCAG
CAGTAAAGAAGTATGACCTCTTCCAGTACCAAGAAGAGACAAAATCTTGG
CAAAAGTCAGAAAGTACAGGAATGATAGCTACCCCCATCACACAGTTCTT
GGATGTCAATGCTAACACTGTTTGTGTGGTGGCAAAGATGATTAAAACTT
GTCTGGATCGCCCAGAATCAAACAAGCATCTGGAAGTTCCAAGCAGTGAA
GAAGACAATGACAGTGATGAGGAGCTTTTGGATTAGATGTTCACCAGCGG
CTATGCAGAGGTCAAACAGGAAAGCATTATTATCAAGGATGTGAGTGAGG
TAGCCATGGCAACCATTTTGGACTACGCCTACACCGGCTGTCTTCAGATG
GAGCCAGACCAGGTCCAGACTGTGATGTCTGCAGCCAGACTGCTGCAGGT
GGATTTTGTATACAATAAAGCATCAATATACATGAAAGACAAGCTTGACA
TGTCCAACTGTGTAGAAATGTTGATGTATGCTGACATGCTGGGGGACCTC
ACCTTACAAGAGGCCAGTAGGAGGTTCATCGCATCCAGGATCAACCAGAT
GTCTCTACAACCCTCCTTTCTCCAGTTGTCTTTGGCTCAGCTCCAGCCAT
TGCTCAACAGGGACGATCTGATAAGTCGCTCGGAGGACAGCATTGTCCAA
GTTGCTCTAAGATGGATCAAATTTGACCAAGAAGAACGCGTGCAGCACCT
TCCGGCCCTTTGCAGATGCTTCCGTCATTCCTTCATCAGCGCAGACCAAC
TTGTGGAACTCGAGAGTAAGTGCCCGTCAACAGACAGCAAGTTGGTTTAC
AGTGACAGCACAACCCAACGTCTTGGACAGACAGGCACAGAAATGCAGAT
TTTCCTTAGAGAAAACACTCCTAACGTTAACTTCCATTGTCATACTCCTT
GCTACGATCCTTCAACAGGCATGTCGTACACAATGAATTTACCCCTTACT
CGGGATGGCTTCTCGGTAGCAGTAACACCTGATGACGAGCTGTACTTGGC
AGGACGTGCTTATGTTCGGGATGCGTCAAAATCTGAACATGATTTTTTCC
AGTACAATCACCTGCTAAACTCCTGGGAATCCAGGTGTGGGATGATCACA
CCCAAGACCAGCTGTGTCTTGGTGTACCTGAATGGTTACCTCTATGCCAT
TGGAGGTGACAACATGTATCAAACAGCAGAGAGGTACGACCCCAGCTGTG
ATGAGTGGACGTCCATTGCACCTATGCCCAGTCCCATCTCCTCAGAACTT
TGTGCTGTTACCCTTGATGACAGCATCTACATCATCAGTAACGAAGGCTG
CTACAGTTTCAGTACCATAGAAAACAGGTGGAGAAAGACAAAAGACATGA
ACGAACCTCCTAATATGCCTCAGGCAGTCACATACAAGGGCTGCATTTAC
TGTATGGACAGGTCAGACCTGTGTTATGTAGAGAAGTACAACCCAACAAA
TGACACATGGGAATGTTTAGGGGAGTACATGCCACCTGAGTATGATGATG
CGATCTTAATGCTCTATGAAGGGTCTTTGTACCTCCTTGTCATACACTCC
AAAGGTGCCTTCTGTGGTTTCTATGTCCGCCCTCGATGGTCAGCAGTAAA
GAAGTATGACCTCTTCCAGTACCAAGAAGAGACAAAATCTTGGCAAAAGT
CAGAAAGTACAGGAATGATAGCTACCCCCATCACACAGTTCTTGGATGTC
AATGCTAACACTGTTTGTGTGGTGGCAAAGATGATTAAAACTTGTCTGGA
TCGCCCAGAATCAAACAAGCATCTGGAAGTTCCAAGCAGTGAAGAAGACA
ATGACAGTGATGAGGAGCTTTTGGATTAGATGTTCACCAGCGGCTATGCA
GAGGTCAAACAGGAAAGCATTATTATCAAGGATGTGAGTGAGGTAGCCAT
GGCAACCATTTTGGACTACGCCTACACCGGCTGTCTTCAGATGGAGCCAG
ACCAGGTCCAGACTGTGATGTCTGCAGCCAGACTGCTGCAGGTGGATTTT
GTATACAATAAAGCATCAATATACATGAAAGACAAGCTTGACATGTCCAA
CTGTGTAGAAATGTTGATGTATGCTGACATGCTGGGGGACCTCACCTTAC
AAGAGGCCAGTAGGAGGTTCATCGCATCCAGGATCAACCAGATGTCTCTA
CAACCCTCCTTTCTCCAGTTGTCTTTGGCTCAGCTCCAGCCATTGCTCAA
CAGGGACGATCTGATAAGTCGCTCGGAGGACAGCATTGTCCAAGTTGCTC
TAAGATGGATCAAATTTGACCAAGAAGAACGCGTGCAGCACCTTCCGGCC
CTTTGCAGATGCTTCCGTCATTCCTTCATCAGCGCAGACCAACTTGTGGA
ACTCGAGAGTAAGTGCCCGTCAACAGACAGCAAGTTGGTTTACAGTGACA
GCACAACCCAACGTCTTGGACAGACAGGCACAGAAATGCAGATTTTCCTT
AGAGAAAACACTCCTAACGTTAACTTCCATTGTCATACTCCTTGCTACGA
TCCTTCAACAGGCATGTCGTACACAATGAATTTACCCCTTACTCGGGATG
GCTTCTCGGTAGCAGTAACACCTGATGACGAGCTGTACTTGGCAGGACGT
GCTTATGTTCGGGATGCGTCAAAATCTGAACATGATTTTTTCCAGTACAA
TCACCTGCTAAACTCCTGGGAATCCAGGTGTGGGATGATCACACCCAAGA
CCAGCTGTGTCTTGGTGTACCTGAATGGTTACCTCTATGCCATTGGAGGT
GACAACATGTATCAAACAGCAGAGAGGTACGACCCCAGCTGTGATGAGTG
GACGTCCATTGCACCTATGCCCAGTCCCATCTCCTCAGAACTTTGTGCTG
TTACCCTTGATGACAGCATCTACATCATCAGTAACGAAGGCTGCTACAGT
TTCAGTACCATAGAAAACAGGTGGAGAAAGACAAAAGACATGAACGAACC
TCCTAATATGCCTCAGGCAGTCACATACAAGGGCTGCATTTACTGTATGG
ACAGGTCAGACCTGTGTTATGTAGAGAAGTACAACCCAACAAATGACACA
TGGGAATGTTTAGGGGAGTACATGCCACCTGAGTATGATGATGCGATCTT
AATGCTCTATGAAGGGTCTTTGTACCTCCTTGTCATACACTCCAAAGGTG
CCTTCTGTGGTTTCTATGTCCGCCCTCGATGGTCAGCAGTAAAGAAGTAT
GACCTCTTCCAGTACCAAGAAGAGACAAAATCTTGGCAAAAGTCAGAAAG
TACAGGAATGATAGCTACCCCCATCACACAGTTCTTGGATGTCAATGCTA
ACACTGTTTGTGTGGTGGCAAAGATGATTAAAACTTGTCTGGATCGCCCA
GAATCAAACAAGCATCTGGAAGTTCCAAGCAGTGAAGAAGACAATGACAG
TGATGAGGAGCTTTTGGATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000153 | genome | Sc0000153:320412..323091 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95831_evm2 |
| Biotype | protein_coding |
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