|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95836_evm1 >transcript:BL95836_evm1-protein ID=transcript:BL95836_evm1-protein|Name=transcript:BL95836_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=246bp
METKLLLAVWLVLHTAYCLPKDCGECEPDACPEIDCPSNMTTKDACSCCG
VCLREEDEVCGGKHWSEGRCVEGYYCTADPDNADEKPGVCNCKYPYRVCG
SDGKDYDTYCQLRFTSWRSKKMGGDKIHKVHTGFCEFAPIITIPPTDVRN
TTGNTVFMSCEVKSNPSSQIVWKFKKDEEDEGVDLPADYANTFCSFRGGP
DTNKVTGWVLIEGLQKTNAGIYQCFASNAFGNDTSTAYVEVQEEEL Run BLAST on NCBI mRNA from alignment at Sc0000154:604344..607443+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95836_evm1 ID=transcript:BL95836_evm1|Name=transcript:BL95836_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3100bp|location=Sequence derived from alignment at Sc0000154:604344..607443+ (Branchiostoma lanceolatum)
ATGGAGACGAAGTTACTCCTGGCCGTTTGGCTGGTCCTCCACACGGCGTA
CTGCCTGCCGAAGGACTGTGGGGAGTGCGAGCCTGACGCCTGTCCAGAGA
TCGACTGCCCATCCAACATGACGACGAAAGATGCTTGTTCCTGCTGCGGT
GTCTGCTTGAGGGAAGAGGACGAAGTTTGTGGAGGAAAGCATTGGTCGGA
AGGCCGCTGTGTGGAAGGTTACTACTGCACTGGTAAGACAAACTTAAACT
TTTCTCGATGGAACAAGCTTATTATCACGGAATACCGTCGTTTTCAGGCG
ACTTTTGCTAAGGGGTTGTCTAGCCTTGTCTAGTAAAAAACTAAACTTTA
GTACTGAGTAGATTGATGACATTTGTAGAAATAGCATTTGCGAAGCTAAT
CTCTAGCTGAAAGCTTGCTATGTTTGCGCTGCGCCTGTTTTCAATTAACG
AACGGTCAAGTTTTGTTTTACTTGGGTTCAACAACCCCGTATTCACATCC
AACGGTATCGACTGAAATGGAACCAAATATGCAATATTCTTTTTTTCTAT
GAGCCTTAGCTTTTGATATCTGTTGATCAAACCACTGACCATGAACGTAT
ACACATCGTTCCGACTAGTTGATTGTCATGAACTGTCAGCGAAACACCAA
TTGATTTCTCACTCCTCGTAACCATAAACATATAGTGTATGTACTAGAGG
AAAAAGCGCTTGGCCATTGGCTAAAAGCAATCGCCTCATCTACATCTTTT
TGTTCTGCTTTCATGCAATCAATATCTGTGTTGATGAGTCCCCTTCTCTT
CCATCAATTCGCGTTGAAACAGCGGACCCGGACAATGCTGATGAGAAGCC
TGGGGTGTGTAACTGCAAGTACCCGTACCGTGTGTGCGGGTCTGACGGGA
AGGACTATGACACCTACTGCCAGCTCAGGTTCACCTCCTGGCGCAGCAAG
AAGATGGGCGGAGACAAGATCCACAAGGTGCACACGGGATTCTGCGAGTT
CGGTCAGTGCAGCGCTTTTTCTGCACATTTGAAGTGTAATCATTTCGTTA
GTAGCTTACCAGATATAAAGATAAAGGGCCGGTCTAAACTGGAAGAACAT
CCTACCTGACCGTAAACTTTACTCTACTCTAAAGGCATGCTGTGCCGTGG
CCCAATGTACAAGTATGGCCCGTATCCGCCGCGTATGTTAAAATTGTTGA
CAGATTGTAATTATTTGGAAGTACACTTAAGTATGAGGCAGTCATTATGT
TTTATATTTGCAACAGCCAAGCAGATGCGGCAGAATGAATTGGGGGACTT
CTTCGTTTTCAGTTGTGTGGTGGAAGTTAAAGCTATTTATAGAAAACGTC
CGCCCTGACCTGTAACTTTCCGTGACTGCTTTTTAAGTCAGTCCAGCTGT
CTGTCACCGAGTACTTCAACTTTAATCCAACCTGACCAATAGATAAACAC
AGTGTCATTCCAATGGCTTGTCAGTCAATGTAGGCAGGGTGTACGGTTTA
AGTGAATTCGTCCAGTTTGGGCCGAACCGCTAGTTCGCTATAGAAATAAC
TAGTTCATCGACGGTTGGTTTTGAAGCAGATCTAGACATTTTCTTTATCT
GACAGAGATACCCAAGGGCAGTGGGGGAATTAGGTCAGTTGCTTGGAAGG
TGGCCAATATACTCCATCTCTAATCAGCCTGAATTATCAGAGAACAGCTT
GCACGCTGTGCGTCTATTGGACACGTACCAAGGACTATCGGGCACAGGGA
CCTGGCTTTGAGACAAATAGTTATAGAGTGTGGTTTCATATAACCGGCTA
ACAACATCTGAACCAAGTCACACAAAAAAGAAACATGTCAATGGTCAATG
ATATAGGAAACGTTAAAATACTTTCACCATAAGGTTTTCATTACGCTCCA
GACGCCTAGGTATGGTCATTGTCATGAGCAAGAGACCTTTTCTTATCAAC
ATTTAATGTCCATTTCTCAACGTCATCCACACAACAGCGCCGATCATCAC
CATCCCACCGACGGACGTCCGGAACACCACGGGCAACACAGTGTTCATGA
GCTGTGAGGTCAAGTCCAACCCGTCTTCACAGATCGTCTGGAAGTTTAAG
AAAGGTGAGGCGCATCACGATGGTTAATTTGTCATCCGTGCGACATTCTT
GTAGCCTGGTTTCCATCCTATTCTACATGTAGCTTCTCTGATATTTGACA
TGCCGGGAAGCGGTCAAAGGAGTGAATCGGAGCTAGAATAGGATAGATAC
CATGCTAACTTTCTCGTGCCAAGGCAAGCTGGAGAAATGTCATTCATTCA
TTCCTTCATTATCTAAATACTCAGCGGCATTGCCCGTCTCAGTTGACGGA
GGCAACTTCGCATAATCAGAGTTGACATCACTGTGCTTGCCAGAAACGTC
TTAGCCCTAAGCCACACCATAAATACATCGAAGTGCATTTCCGATCTGAA
ACATTTTTTAAACGTTGAAAGTAGGGGTTTAAGCGCGACTTAGCGTGAGA
ACGAGACTTGCATTTTTGGAATGTCTACTAATGCACTACAAAGAAATCCT
TGTCATTACTCACATACTTACAGTCGACTTTCTGTTTTGTTTGTAGATGA
GGAGGATGAAGGAGTCGACCTCCCAGCTGACTATGCCAACACATTCTGCA
GTTTCCGCGGGGGGCCGGACACCAACAAGGTGACTGGCTGGGTACTGGTA
AGTAGGGCCTGCAACAAAGTGGCGCCATCACATTTTCATTCTGCTGACGT
TGATTTTTTTTAATATAGTGGCGTTTACTTTGATATCCTCTGCTTTGTCG
CACCACTCATATATCGTGTGTGGCGCATATGGGACTGGTTTTCCAACAGC
TCGGAAAATTAAAGCCCTGGCAAGATAATCACTGGCACACAGACATACAC
CTGCATTTGGCAACCTGACAGAGCCGATGATACAGACATACACCTGCACT
TGGCACCCTGACAGGCTGTGTGATTTCTTACCCCCCCAGATCGAAGGCCT
ACAGAAGACCAATGCTGGCATATACCAGTGTTTTGCTTCCAACGCGTTTG
GAAACGACACCAGCACGGCCTATGTGGAGGTGCAGGAGGAGGAACTGTGA
Coding sequence (CDS) from alignment at Sc0000154:604344..607443+ >transcript:BL95836_evm1 ID=transcript:BL95836_evm1|Name=transcript:BL95836_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=741bp|location=Sequence derived from alignment at Sc0000154:604344..607443+ (Branchiostoma lanceolatum)
ATGGAGACGAAGTTACTCCTGGCCGTTTGGCTGGTCCTCCACACGGCGTA
CTGCCTGCCGAAGGACTGTGGGGAGTGCGAGCCTGACGCCTGTCCAGAGA
TCGACTGCCCATCCAACATGACGACGAAAGATGCTTGTTCCTGCTGCGGT
GTCTGCTTGAGGGAAGAGGACGAAGTTTGTGGAGGAAAGCATTGGTCGGA
AGGCCGCTGTGTGGAAGGTTACTACTGCACTGCGGACCCGGACAATGCTG
ATGAGAAGCCTGGGGTGTGTAACTGCAAGTACCCGTACCGTGTGTGCGGG
TCTGACGGGAAGGACTATGACACCTACTGCCAGCTCAGGTTCACCTCCTG
GCGCAGCAAGAAGATGGGCGGAGACAAGATCCACAAGGTGCACACGGGAT
TCTGCGAGTTCGCGCCGATCATCACCATCCCACCGACGGACGTCCGGAAC
ACCACGGGCAACACAGTGTTCATGAGCTGTGAGGTCAAGTCCAACCCGTC
TTCACAGATCGTCTGGAAGTTTAAGAAAGATGAGGAGGATGAAGGAGTCG
ACCTCCCAGCTGACTATGCCAACACATTCTGCAGTTTCCGCGGGGGGCCG
GACACCAACAAGGTGACTGGCTGGGTACTGATCGAAGGCCTACAGAAGAC
CAATGCTGGCATATACCAGTGTTTTGCTTCCAACGCGTTTGGAAACGACA
CCAGCACGGCCTATGTGGAGGTGCAGGAGGAGGAACTGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000154 | genome | Sc0000154:604344..607443 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95836_evm1 |
| Biotype | protein_coding |
|
