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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95836_evm1 >transcript:BL95836_evm1-protein ID=transcript:BL95836_evm1-protein|Name=transcript:BL95836_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=246bp
METKLLLAVWLVLHTAYCLPKDCGECEPDACPEIDCPSNMTTKDACSCCG
VCLREEDEVCGGKHWSEGRCVEGYYCTADPDNADEKPGVCNCKYPYRVCG
SDGKDYDTYCQLRFTSWRSKKMGGDKIHKVHTGFCEFAPIITIPPTDVRN
TTGNTVFMSCEVKSNPSSQIVWKFKKDEEDEGVDLPADYANTFCSFRGGP
DTNKVTGWVLIEGLQKTNAGIYQCFASNAFGNDTSTAYVEVQEEEL Run BLAST on NCBI mRNA from alignment at Sc0000154:604344..607443+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95836_evm1 ID=transcript:BL95836_evm1|Name=transcript:BL95836_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3100bp|location=Sequence derived from alignment at Sc0000154:604344..607443+ (Branchiostoma lanceolatum)
ATGGAGACGAAGTTACTCCTGGCCGTTTGGCTGGTCCTCCACACGGCGTA
CTGCCTGCCGAAGGACTGTGGGGAGTGCGAGCCTGACGCCTGTCCAGAGA
TCGACTGCCCATCCAACATGACGACGAAAGATGCTTGTTCCTGCTGCGGT
GTCTGCTTGAGGGAAGAGGACGAAGTTTGTGGAGGAAAGCATTGGTCGGA
AGGCCGCTGTGTGGAAGGTTACTACTGCACTGGTAAGACAAACTTAAACT
TTTCTCGATGGAACAAGCTTATTATCACGGAATACCGTCGTTTTCAGGCG
ACTTTTGCTAAGGGGTTGTCTAGCCTTGTCTAGTAAAAAACTAAACTTTA
GTACTGAGTAGATTGATGACATTTGTAGAAATAGCATTTGCGAAGCTAAT
CTCTAGCTGAAAGCTTGCTATGTTTGCGCTGCGCCTGTTTTCAATTAACG
AACGGTCAAGTTTTGTTTTACTTGGGTTCAACAACCCCGTATTCACATCC
AACGGTATCGACTGAAATGGAACCAAATATGCAATATTCTTTTTTTCTAT
GAGCCTTAGCTTTTGATATCTGTTGATCAAACCACTGACCATGAACGTAT
ACACATCGTTCCGACTAGTTGATTGTCATGAACTGTCAGCGAAACACCAA
TTGATTTCTCACTCCTCGTAACCATAAACATATAGTGTATGTACTAGAGG
AAAAAGCGCTTGGCCATTGGCTAAAAGCAATCGCCTCATCTACATCTTTT
TGTTCTGCTTTCATGCAATCAATATCTGTGTTGATGAGTCCCCTTCTCTT
CCATCAATTCGCGTTGAAACAGCGGACCCGGACAATGCTGATGAGAAGCC
TGGGGTGTGTAACTGCAAGTACCCGTACCGTGTGTGCGGGTCTGACGGGA
AGGACTATGACACCTACTGCCAGCTCAGGTTCACCTCCTGGCGCAGCAAG
AAGATGGGCGGAGACAAGATCCACAAGGTGCACACGGGATTCTGCGAGTT
CGGTCAGTGCAGCGCTTTTTCTGCACATTTGAAGTGTAATCATTTCGTTA
GTAGCTTACCAGATATAAAGATAAAGGGCCGGTCTAAACTGGAAGAACAT
CCTACCTGACCGTAAACTTTACTCTACTCTAAAGGCATGCTGTGCCGTGG
CCCAATGTACAAGTATGGCCCGTATCCGCCGCGTATGTTAAAATTGTTGA
CAGATTGTAATTATTTGGAAGTACACTTAAGTATGAGGCAGTCATTATGT
TTTATATTTGCAACAGCCAAGCAGATGCGGCAGAATGAATTGGGGGACTT
CTTCGTTTTCAGTTGTGTGGTGGAAGTTAAAGCTATTTATAGAAAACGTC
CGCCCTGACCTGTAACTTTCCGTGACTGCTTTTTAAGTCAGTCCAGCTGT
CTGTCACCGAGTACTTCAACTTTAATCCAACCTGACCAATAGATAAACAC
AGTGTCATTCCAATGGCTTGTCAGTCAATGTAGGCAGGGTGTACGGTTTA
AGTGAATTCGTCCAGTTTGGGCCGAACCGCTAGTTCGCTATAGAAATAAC
TAGTTCATCGACGGTTGGTTTTGAAGCAGATCTAGACATTTTCTTTATCT
GACAGAGATACCCAAGGGCAGTGGGGGAATTAGGTCAGTTGCTTGGAAGG
TGGCCAATATACTCCATCTCTAATCAGCCTGAATTATCAGAGAACAGCTT
GCACGCTGTGCGTCTATTGGACACGTACCAAGGACTATCGGGCACAGGGA
CCTGGCTTTGAGACAAATAGTTATAGAGTGTGGTTTCATATAACCGGCTA
ACAACATCTGAACCAAGTCACACAAAAAAGAAACATGTCAATGGTCAATG
ATATAGGAAACGTTAAAATACTTTCACCATAAGGTTTTCATTACGCTCCA
GACGCCTAGGTATGGTCATTGTCATGAGCAAGAGACCTTTTCTTATCAAC
ATTTAATGTCCATTTCTCAACGTCATCCACACAACAGCGCCGATCATCAC
CATCCCACCGACGGACGTCCGGAACACCACGGGCAACACAGTGTTCATGA
GCTGTGAGGTCAAGTCCAACCCGTCTTCACAGATCGTCTGGAAGTTTAAG
AAAGGTGAGGCGCATCACGATGGTTAATTTGTCATCCGTGCGACATTCTT
GTAGCCTGGTTTCCATCCTATTCTACATGTAGCTTCTCTGATATTTGACA
TGCCGGGAAGCGGTCAAAGGAGTGAATCGGAGCTAGAATAGGATAGATAC
CATGCTAACTTTCTCGTGCCAAGGCAAGCTGGAGAAATGTCATTCATTCA
TTCCTTCATTATCTAAATACTCAGCGGCATTGCCCGTCTCAGTTGACGGA
GGCAACTTCGCATAATCAGAGTTGACATCACTGTGCTTGCCAGAAACGTC
TTAGCCCTAAGCCACACCATAAATACATCGAAGTGCATTTCCGATCTGAA
ACATTTTTTAAACGTTGAAAGTAGGGGTTTAAGCGCGACTTAGCGTGAGA
ACGAGACTTGCATTTTTGGAATGTCTACTAATGCACTACAAAGAAATCCT
TGTCATTACTCACATACTTACAGTCGACTTTCTGTTTTGTTTGTAGATGA
GGAGGATGAAGGAGTCGACCTCCCAGCTGACTATGCCAACACATTCTGCA
GTTTCCGCGGGGGGCCGGACACCAACAAGGTGACTGGCTGGGTACTGGTA
AGTAGGGCCTGCAACAAAGTGGCGCCATCACATTTTCATTCTGCTGACGT
TGATTTTTTTTAATATAGTGGCGTTTACTTTGATATCCTCTGCTTTGTCG
CACCACTCATATATCGTGTGTGGCGCATATGGGACTGGTTTTCCAACAGC
TCGGAAAATTAAAGCCCTGGCAAGATAATCACTGGCACACAGACATACAC
CTGCATTTGGCAACCTGACAGAGCCGATGATACAGACATACACCTGCACT
TGGCACCCTGACAGGCTGTGTGATTTCTTACCCCCCCAGATCGAAGGCCT
ACAGAAGACCAATGCTGGCATATACCAGTGTTTTGCTTCCAACGCGTTTG
GAAACGACACCAGCACGGCCTATGTGGAGGTGCAGGAGGAGGAACTGTGA
Coding sequence (CDS) from alignment at Sc0000154:604344..607443+ >transcript:BL95836_evm1 ID=transcript:BL95836_evm1|Name=transcript:BL95836_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=3705bp|location=Sequence derived from alignment at Sc0000154:604344..607443+ (Branchiostoma lanceolatum)
ATGGAGACGAAGTTACTCCTGGCCGTTTGGCTGGTCCTCCACACGGCGTA
CTGCCTGCCGAAGGACTGTGGGGAGTGCGAGCCTGACGCCTGTCCAGAGA
TCGACTGCCCATCCAACATGACGACGAAAGATGCTTGTTCCTGCTGCGGT
GTCTGCTTGAGGGAAGAGGACGAAGTTTGTGGAGGAAAGCATTGGTCGGA
AGGCCGCTGTGTGGAAGGTTACTACTGCACTGCGGACCCGGACAATGCTG
ATGAGAAGCCTGGGGTGTGTAACTGCAAGTACCCGTACCGTGTGTGCGGG
TCTGACGGGAAGGACTATGACACCTACTGCCAGCTCAGGTTCACCTCCTG
GCGCAGCAAGAAGATGGGCGGAGACAAGATCCACAAGGTGCACACGGGAT
TCTGCGAGTTCGCGCCGATCATCACCATCCCACCGACGGACGTCCGGAAC
ACCACGGGCAACACAGTGTTCATGAGCTGTGAGGTCAAGTCCAACCCGTC
TTCACAGATCGTCTGGAAGTTTAAGAAAGATGAGGAGGATGAAGGAGTCG
ACCTCCCAGCTGACTATGCCAACACATTCTGCAGTTTCCGCGGGGGGCCG
GACACCAACAAGGTGACTGGCTGGGTACTGATCGAAGGCCTACAGAAGAC
CAATGCTGGCATATACCAGTGTTTTGCTTCCAACGCGTTTGGAAACGACA
CCAGCACGGCCTATGTGGAGGTGCAGGAGGAGGAACTGTGAATGGAGACG
AAGTTACTCCTGGCCGTTTGGCTGGTCCTCCACACGGCGTACTGCCTGCC
GAAGGACTGTGGGGAGTGCGAGCCTGACGCCTGTCCAGAGATCGACTGCC
CATCCAACATGACGACGAAAGATGCTTGTTCCTGCTGCGGTGTCTGCTTG
AGGGAAGAGGACGAAGTTTGTGGAGGAAAGCATTGGTCGGAAGGCCGCTG
TGTGGAAGGTTACTACTGCACTGCGGACCCGGACAATGCTGATGAGAAGC
CTGGGGTGTGTAACTGCAAGTACCCGTACCGTGTGTGCGGGTCTGACGGG
AAGGACTATGACACCTACTGCCAGCTCAGGTTCACCTCCTGGCGCAGCAA
GAAGATGGGCGGAGACAAGATCCACAAGGTGCACACGGGATTCTGCGAGT
TCGCGCCGATCATCACCATCCCACCGACGGACGTCCGGAACACCACGGGC
AACACAGTGTTCATGAGCTGTGAGGTCAAGTCCAACCCGTCTTCACAGAT
CGTCTGGAAGTTTAAGAAAGATGAGGAGGATGAAGGAGTCGACCTCCCAG
CTGACTATGCCAACACATTCTGCAGTTTCCGCGGGGGGCCGGACACCAAC
AAGGTGACTGGCTGGGTACTGATCGAAGGCCTACAGAAGACCAATGCTGG
CATATACCAGTGTTTTGCTTCCAACGCGTTTGGAAACGACACCAGCACGG
CCTATGTGGAGGTGCAGGAGGAGGAACTGTGAATGGAGACGAAGTTACTC
CTGGCCGTTTGGCTGGTCCTCCACACGGCGTACTGCCTGCCGAAGGACTG
TGGGGAGTGCGAGCCTGACGCCTGTCCAGAGATCGACTGCCCATCCAACA
TGACGACGAAAGATGCTTGTTCCTGCTGCGGTGTCTGCTTGAGGGAAGAG
GACGAAGTTTGTGGAGGAAAGCATTGGTCGGAAGGCCGCTGTGTGGAAGG
TTACTACTGCACTGCGGACCCGGACAATGCTGATGAGAAGCCTGGGGTGT
GTAACTGCAAGTACCCGTACCGTGTGTGCGGGTCTGACGGGAAGGACTAT
GACACCTACTGCCAGCTCAGGTTCACCTCCTGGCGCAGCAAGAAGATGGG
CGGAGACAAGATCCACAAGGTGCACACGGGATTCTGCGAGTTCGCGCCGA
TCATCACCATCCCACCGACGGACGTCCGGAACACCACGGGCAACACAGTG
TTCATGAGCTGTGAGGTCAAGTCCAACCCGTCTTCACAGATCGTCTGGAA
GTTTAAGAAAGATGAGGAGGATGAAGGAGTCGACCTCCCAGCTGACTATG
CCAACACATTCTGCAGTTTCCGCGGGGGGCCGGACACCAACAAGGTGACT
GGCTGGGTACTGATCGAAGGCCTACAGAAGACCAATGCTGGCATATACCA
GTGTTTTGCTTCCAACGCGTTTGGAAACGACACCAGCACGGCCTATGTGG
AGGTGCAGGAGGAGGAACTGTGAATGGAGACGAAGTTACTCCTGGCCGTT
TGGCTGGTCCTCCACACGGCGTACTGCCTGCCGAAGGACTGTGGGGAGTG
CGAGCCTGACGCCTGTCCAGAGATCGACTGCCCATCCAACATGACGACGA
AAGATGCTTGTTCCTGCTGCGGTGTCTGCTTGAGGGAAGAGGACGAAGTT
TGTGGAGGAAAGCATTGGTCGGAAGGCCGCTGTGTGGAAGGTTACTACTG
CACTGCGGACCCGGACAATGCTGATGAGAAGCCTGGGGTGTGTAACTGCA
AGTACCCGTACCGTGTGTGCGGGTCTGACGGGAAGGACTATGACACCTAC
TGCCAGCTCAGGTTCACCTCCTGGCGCAGCAAGAAGATGGGCGGAGACAA
GATCCACAAGGTGCACACGGGATTCTGCGAGTTCGCGCCGATCATCACCA
TCCCACCGACGGACGTCCGGAACACCACGGGCAACACAGTGTTCATGAGC
TGTGAGGTCAAGTCCAACCCGTCTTCACAGATCGTCTGGAAGTTTAAGAA
AGATGAGGAGGATGAAGGAGTCGACCTCCCAGCTGACTATGCCAACACAT
TCTGCAGTTTCCGCGGGGGGCCGGACACCAACAAGGTGACTGGCTGGGTA
CTGATCGAAGGCCTACAGAAGACCAATGCTGGCATATACCAGTGTTTTGC
TTCCAACGCGTTTGGAAACGACACCAGCACGGCCTATGTGGAGGTGCAGG
AGGAGGAACTGTGAATGGAGACGAAGTTACTCCTGGCCGTTTGGCTGGTC
CTCCACACGGCGTACTGCCTGCCGAAGGACTGTGGGGAGTGCGAGCCTGA
CGCCTGTCCAGAGATCGACTGCCCATCCAACATGACGACGAAAGATGCTT
GTTCCTGCTGCGGTGTCTGCTTGAGGGAAGAGGACGAAGTTTGTGGAGGA
AAGCATTGGTCGGAAGGCCGCTGTGTGGAAGGTTACTACTGCACTGCGGA
CCCGGACAATGCTGATGAGAAGCCTGGGGTGTGTAACTGCAAGTACCCGT
ACCGTGTGTGCGGGTCTGACGGGAAGGACTATGACACCTACTGCCAGCTC
AGGTTCACCTCCTGGCGCAGCAAGAAGATGGGCGGAGACAAGATCCACAA
GGTGCACACGGGATTCTGCGAGTTCGCGCCGATCATCACCATCCCACCGA
CGGACGTCCGGAACACCACGGGCAACACAGTGTTCATGAGCTGTGAGGTC
AAGTCCAACCCGTCTTCACAGATCGTCTGGAAGTTTAAGAAAGATGAGGA
GGATGAAGGAGTCGACCTCCCAGCTGACTATGCCAACACATTCTGCAGTT
TCCGCGGGGGGCCGGACACCAACAAGGTGACTGGCTGGGTACTGATCGAA
GGCCTACAGAAGACCAATGCTGGCATATACCAGTGTTTTGCTTCCAACGC
GTTTGGAAACGACACCAGCACGGCCTATGTGGAGGTGCAGGAGGAGGAAC
TGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000154 | genome | Sc0000154:604344..607443 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95836_evm1 |
| Biotype | protein_coding |
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