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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95840_evm1 >transcript:BL95840_evm1-protein ID=transcript:BL95840_evm1-protein|Name=transcript:BL95840_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=479bp
MPVRYTRPLDGGWGWAVVLAVFMIGACSFGVIRSFGVFLEEFTTQFDQSA
TATSLVISVCIGIAFGGTLLGVMLSARFGFRPVAMAGGVLAAVGCILTYF
STSIVHLYITVGVMVGLGSSLAFFPSLSLVGKYFDKKRAIANGIAVSGPS
VGSMVFPPVFTYLIEEYGWRGSLLIAAGVMLNITAFAALLRPIQLPEKQL
SLPSDRAETTSFSELNEVPQDRPTVRINEGKSSLSRSHWRTVIAELKALL
TNPRLVSFITADMFFLGFGFFIPVVHIAPRARHLGLEPYQSAFLVSLIAI
GDVISRFLSGFLPTCRKFRHLHWYTLSLLTTGISSLLSTLAKTYPALAAY
CMVLGLLEGAGLAISLTVLADLVGPTRLSGAMGLVMLLMSVIVTGAPPIA
GKLYDSTQNYNMSFIVAGCGPIFGGLIAAILLCFGDENVRRVSERQSPPT
AFVNGARPSSVVKSDDKQLLKPFVIETSV Run BLAST on NCBI mRNA from alignment at Sc0000156:367171..369510- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95840_evm1 ID=transcript:BL95840_evm1|Name=transcript:BL95840_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2340bp|location=Sequence derived from alignment at Sc0000156:367171..369510- (Branchiostoma lanceolatum)
ATGCCTGTACGTTATACCAGGCCCTTAGATGGCGGATGGGGGTGGGCGGT
GGTTCTAGCCGTCTTTATGATCGGCGCCTGCAGTTTTGGAGTCATTCGAT
CCTTCGGCGTGTTTTTAGAAGAGTTCACAACGCAGTTTGACCAATCAGCT
ACAGCCACGTCATTGGTCATCTCCGTTTGTATAGGCATCGCATTTGGAGG
AAGTAAGAGACGAGCATCTCATGAGGCCAAAGCGCTTTCATTACATTTCA
TTTATGTATCTTCACTCAATTGTTGTCGTATANATTGTTGTCATATATAC
CACAGCAATGTATCTTATCCTATGTCTAGATCTGAACAGTAACTTGCAAA
ATGTGGTGCGTTTAACCTAGATGTAAAAAGTCTAAATACAAGATAATTGT
AACAAACACAAGTAAAGTAAGTACAAGGATAGTTGAAATTCGTCCAGCCT
TTTTATTGAAACGAGATTTTAGACCTTGAACAAAGAATTCTAACCTTTTC
AATCTATTGACGTGACTTGACTTTCATCTACCGTTTCAGCTTTACTTGGC
GTCATGCTAAGCGCGAGGTTCGGCTTCAGACCGGTGGCGATGGCGGGCGG
AGTCCTGGCGGCGGTTGGCTGCATTCTGACGTACTTCTCGACCAGTATTG
TCCACCTTTACATCACTGTAGGCGTGATGGTTGGTGCGTGAACACGGTGT
CCAATATGAAGTACACGTTGTGATTTTGCACAAGACACACACACACACAC
ACACACATACACACACACACACACACACACACACACACACACACACAGAA
CGTTGTTGTTGTTGTACATGAACTGTAGGCGTGTTGGTTAGCGTGTGAAC
ACGATGTCCAGTCAATGCCCATATATAGTACGTGTTGTGATTTTGCTCAA
GAAAATGCACACAGAACGTAAATGGTATATCATTTTTTTGTCTTCAGGCT
TAGGGTCATCTCTTGCTTTCTTCCCGAGCTTAAGTCTGGTGGGGAAATAC
TTCGACAAGAAGAGAGCCATTGCCAACGGTATCGCTGTCTCTGGCCCTAG
CGTGGGGAGCATGGTGTTTCCCCCCGTCTTCACGTATCTGATAGAGGAGT
ACGGGTGGAGAGGGTCGTTATTGATTGCTGCCGGAGTCATGCTCAACATC
ACAGCTTTCGCGGCATTGTTGAGGCCGATCCAGCTGCCTGAAAAGCAACT
GTCGTTGCCGTCAGACCGAGCGGAAACAACCTCATTCTCAGAGCTTAATG
AGGTCCCACAGGACCGACCAACTGTCAGAATTAATGAGGGTAAATCGAGC
CTCTCCCGCAGTCATTGGAGGACAGTGATAGCTGAACTCAAGGCTCTGTT
AACCAATCCTCGTCTAGTTTCCTTCATAACTGCAGACATGTTCTTCTTGG
GGTTTGGCTTCTTCATTCCCGTCGTGCACATCGCGCCGCGCGCACGGCAT
CTCGGTCTTGAGCCGTACCAATCGGCGTTCCTTGTTTCCTTGATTGCTAT
AGGTGACGTCATAAGTCGGTTTCTGTCGGGATTTCTTCCAACATGTCGGA
AGTTTCGGCATCTTCATTGGTACACACTTTCCCTATTAACGACTGGCATC
TCTTCTCTGTTGTCAACCCTTGCAAAGACTTACCCAGCGCTGGCTGCCTA
TTGCATGGTACTAGGGCTTCTCGAAGGGGCAGGTTTGGCAATTTCACTAA
CCGTCCTAGCGGATCTTGTCGGTCCTACAAGACTCTCTGGTGCAATGGGA
CTGGTGATGTTGCTGATGAGCGTTATAGTAACGGGCGCACCTCCCATCGC
AGGTGAGAACAACTAGATTACTATGAGTCTTACCTACTCATTCCGTTTGA
ACGTAAGATTAAAAAACAATTTTCTTATAGAAAAGTAGTCAGTTATCCTA
AGGAGGTTTTATATATAAAACCTCCTTGGTTATCCCCTAGCATCTTGCAT
TTGGTTTCAACAATCACATTTCGTTTAAAGGCAATGTCACCATTTTCTTG
TTAGTTTTTCTATGTGATTTCTCGCCCATGTAAAAATTCGTGTCTGTAGT
AAGCAATGATATTCGTTGTGAATGATATGTGTACATCGGCCTGTGTTTCA
GGGAAGCTGTACGACTCCACACAAAATTACAACATGTCGTTCATCGTGGC
CGGATGCGGCCCTATTTTTGGAGGACTGATAGCCGCCATCTTGTTGTGCT
TTGGGGACGAGAACGTTCGCCGAGTGTCTGAGAGGCAGAGCCCTCCTACC
GCTTTCGTCAACGGAGCCCGACCCAGCAGCGTCGTCAAGTCAGACGACAA
ACAACTTCTCAAGCCGTTTGTGATCGAAACATCAGTGTAA Coding sequence (CDS) from alignment at Sc0000156:367171..369510- >transcript:BL95840_evm1 ID=transcript:BL95840_evm1|Name=transcript:BL95840_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=1440bp|location=Sequence derived from alignment at Sc0000156:367171..369510- (Branchiostoma lanceolatum)
ATGCCTGTACGTTATACCAGGCCCTTAGATGGCGGATGGGGGTGGGCGGT
GGTTCTAGCCGTCTTTATGATCGGCGCCTGCAGTTTTGGAGTCATTCGAT
CCTTCGGCGTGTTTTTAGAAGAGTTCACAACGCAGTTTGACCAATCAGCT
ACAGCCACGTCATTGGTCATCTCCGTTTGTATAGGCATCGCATTTGGAGG
AACTTTACTTGGCGTCATGCTAAGCGCGAGGTTCGGCTTCAGACCGGTGG
CGATGGCGGGCGGAGTCCTGGCGGCGGTTGGCTGCATTCTGACGTACTTC
TCGACCAGTATTGTCCACCTTTACATCACTGTAGGCGTGATGGTTGGCTT
AGGGTCATCTCTTGCTTTCTTCCCGAGCTTAAGTCTGGTGGGGAAATACT
TCGACAAGAAGAGAGCCATTGCCAACGGTATCGCTGTCTCTGGCCCTAGC
GTGGGGAGCATGGTGTTTCCCCCCGTCTTCACGTATCTGATAGAGGAGTA
CGGGTGGAGAGGGTCGTTATTGATTGCTGCCGGAGTCATGCTCAACATCA
CAGCTTTCGCGGCATTGTTGAGGCCGATCCAGCTGCCTGAAAAGCAACTG
TCGTTGCCGTCAGACCGAGCGGAAACAACCTCATTCTCAGAGCTTAATGA
GGTCCCACAGGACCGACCAACTGTCAGAATTAATGAGGGTAAATCGAGCC
TCTCCCGCAGTCATTGGAGGACAGTGATAGCTGAACTCAAGGCTCTGTTA
ACCAATCCTCGTCTAGTTTCCTTCATAACTGCAGACATGTTCTTCTTGGG
GTTTGGCTTCTTCATTCCCGTCGTGCACATCGCGCCGCGCGCACGGCATC
TCGGTCTTGAGCCGTACCAATCGGCGTTCCTTGTTTCCTTGATTGCTATA
GGTGACGTCATAAGTCGGTTTCTGTCGGGATTTCTTCCAACATGTCGGAA
GTTTCGGCATCTTCATTGGTACACACTTTCCCTATTAACGACTGGCATCT
CTTCTCTGTTGTCAACCCTTGCAAAGACTTACCCAGCGCTGGCTGCCTAT
TGCATGGTACTAGGGCTTCTCGAAGGGGCAGGTTTGGCAATTTCACTAAC
CGTCCTAGCGGATCTTGTCGGTCCTACAAGACTCTCTGGTGCAATGGGAC
TGGTGATGTTGCTGATGAGCGTTATAGTAACGGGCGCACCTCCCATCGCA
GGGAAGCTGTACGACTCCACACAAAATTACAACATGTCGTTCATCGTGGC
CGGATGCGGCCCTATTTTTGGAGGACTGATAGCCGCCATCTTGTTGTGCT
TTGGGGACGAGAACGTTCGCCGAGTGTCTGAGAGGCAGAGCCCTCCTACC
GCTTTCGTCAACGGAGCCCGACCCAGCAGCGTCGTCAAGTCAGACGACAA
ACAACTTCTCAAGCCGTTTGTGATCGAAACATCAGTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000156 | genome | Sc0000156:367171..369510 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95840_evm1 |
| Biotype | protein_coding |
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