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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95840_evm1 >transcript:BL95840_evm1-protein ID=transcript:BL95840_evm1-protein|Name=transcript:BL95840_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=479bp
MPVRYTRPLDGGWGWAVVLAVFMIGACSFGVIRSFGVFLEEFTTQFDQSA
TATSLVISVCIGIAFGGTLLGVMLSARFGFRPVAMAGGVLAAVGCILTYF
STSIVHLYITVGVMVGLGSSLAFFPSLSLVGKYFDKKRAIANGIAVSGPS
VGSMVFPPVFTYLIEEYGWRGSLLIAAGVMLNITAFAALLRPIQLPEKQL
SLPSDRAETTSFSELNEVPQDRPTVRINEGKSSLSRSHWRTVIAELKALL
TNPRLVSFITADMFFLGFGFFIPVVHIAPRARHLGLEPYQSAFLVSLIAI
GDVISRFLSGFLPTCRKFRHLHWYTLSLLTTGISSLLSTLAKTYPALAAY
CMVLGLLEGAGLAISLTVLADLVGPTRLSGAMGLVMLLMSVIVTGAPPIA
GKLYDSTQNYNMSFIVAGCGPIFGGLIAAILLCFGDENVRRVSERQSPPT
AFVNGARPSSVVKSDDKQLLKPFVIETSV Run BLAST on NCBI mRNA from alignment at Sc0000156:367171..369510- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95840_evm1 ID=transcript:BL95840_evm1|Name=transcript:BL95840_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2340bp|location=Sequence derived from alignment at Sc0000156:367171..369510- (Branchiostoma lanceolatum)
ATGCCTGTACGTTATACCAGGCCCTTAGATGGCGGATGGGGGTGGGCGGT
GGTTCTAGCCGTCTTTATGATCGGCGCCTGCAGTTTTGGAGTCATTCGAT
CCTTCGGCGTGTTTTTAGAAGAGTTCACAACGCAGTTTGACCAATCAGCT
ACAGCCACGTCATTGGTCATCTCCGTTTGTATAGGCATCGCATTTGGAGG
AAGTAAGAGACGAGCATCTCATGAGGCCAAAGCGCTTTCATTACATTTCA
TTTATGTATCTTCACTCAATTGTTGTCGTATANATTGTTGTCATATATAC
CACAGCAATGTATCTTATCCTATGTCTAGATCTGAACAGTAACTTGCAAA
ATGTGGTGCGTTTAACCTAGATGTAAAAAGTCTAAATACAAGATAATTGT
AACAAACACAAGTAAAGTAAGTACAAGGATAGTTGAAATTCGTCCAGCCT
TTTTATTGAAACGAGATTTTAGACCTTGAACAAAGAATTCTAACCTTTTC
AATCTATTGACGTGACTTGACTTTCATCTACCGTTTCAGCTTTACTTGGC
GTCATGCTAAGCGCGAGGTTCGGCTTCAGACCGGTGGCGATGGCGGGCGG
AGTCCTGGCGGCGGTTGGCTGCATTCTGACGTACTTCTCGACCAGTATTG
TCCACCTTTACATCACTGTAGGCGTGATGGTTGGTGCGTGAACACGGTGT
CCAATATGAAGTACACGTTGTGATTTTGCACAAGACACACACACACACAC
ACACACATACACACACACACACACACACACACACACACACACACACAGAA
CGTTGTTGTTGTTGTACATGAACTGTAGGCGTGTTGGTTAGCGTGTGAAC
ACGATGTCCAGTCAATGCCCATATATAGTACGTGTTGTGATTTTGCTCAA
GAAAATGCACACAGAACGTAAATGGTATATCATTTTTTTGTCTTCAGGCT
TAGGGTCATCTCTTGCTTTCTTCCCGAGCTTAAGTCTGGTGGGGAAATAC
TTCGACAAGAAGAGAGCCATTGCCAACGGTATCGCTGTCTCTGGCCCTAG
CGTGGGGAGCATGGTGTTTCCCCCCGTCTTCACGTATCTGATAGAGGAGT
ACGGGTGGAGAGGGTCGTTATTGATTGCTGCCGGAGTCATGCTCAACATC
ACAGCTTTCGCGGCATTGTTGAGGCCGATCCAGCTGCCTGAAAAGCAACT
GTCGTTGCCGTCAGACCGAGCGGAAACAACCTCATTCTCAGAGCTTAATG
AGGTCCCACAGGACCGACCAACTGTCAGAATTAATGAGGGTAAATCGAGC
CTCTCCCGCAGTCATTGGAGGACAGTGATAGCTGAACTCAAGGCTCTGTT
AACCAATCCTCGTCTAGTTTCCTTCATAACTGCAGACATGTTCTTCTTGG
GGTTTGGCTTCTTCATTCCCGTCGTGCACATCGCGCCGCGCGCACGGCAT
CTCGGTCTTGAGCCGTACCAATCGGCGTTCCTTGTTTCCTTGATTGCTAT
AGGTGACGTCATAAGTCGGTTTCTGTCGGGATTTCTTCCAACATGTCGGA
AGTTTCGGCATCTTCATTGGTACACACTTTCCCTATTAACGACTGGCATC
TCTTCTCTGTTGTCAACCCTTGCAAAGACTTACCCAGCGCTGGCTGCCTA
TTGCATGGTACTAGGGCTTCTCGAAGGGGCAGGTTTGGCAATTTCACTAA
CCGTCCTAGCGGATCTTGTCGGTCCTACAAGACTCTCTGGTGCAATGGGA
CTGGTGATGTTGCTGATGAGCGTTATAGTAACGGGCGCACCTCCCATCGC
AGGTGAGAACAACTAGATTACTATGAGTCTTACCTACTCATTCCGTTTGA
ACGTAAGATTAAAAAACAATTTTCTTATAGAAAAGTAGTCAGTTATCCTA
AGGAGGTTTTATATATAAAACCTCCTTGGTTATCCCCTAGCATCTTGCAT
TTGGTTTCAACAATCACATTTCGTTTAAAGGCAATGTCACCATTTTCTTG
TTAGTTTTTCTATGTGATTTCTCGCCCATGTAAAAATTCGTGTCTGTAGT
AAGCAATGATATTCGTTGTGAATGATATGTGTACATCGGCCTGTGTTTCA
GGGAAGCTGTACGACTCCACACAAAATTACAACATGTCGTTCATCGTGGC
CGGATGCGGCCCTATTTTTGGAGGACTGATAGCCGCCATCTTGTTGTGCT
TTGGGGACGAGAACGTTCGCCGAGTGTCTGAGAGGCAGAGCCCTCCTACC
GCTTTCGTCAACGGAGCCCGACCCAGCAGCGTCGTCAAGTCAGACGACAA
ACAACTTCTCAAGCCGTTTGTGATCGAAACATCAGTGTAA Coding sequence (CDS) from alignment at Sc0000156:367171..369510- >transcript:BL95840_evm1 ID=transcript:BL95840_evm1|Name=transcript:BL95840_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=5760bp|location=Sequence derived from alignment at Sc0000156:367171..369510- (Branchiostoma lanceolatum)
ATGCCTGTACGTTATACCAGGCCCTTAGATGGCGGATGGGGGTGGGCGGT
GGTTCTAGCCGTCTTTATGATCGGCGCCTGCAGTTTTGGAGTCATTCGAT
CCTTCGGCGTGTTTTTAGAAGAGTTCACAACGCAGTTTGACCAATCAGCT
ACAGCCACGTCATTGGTCATCTCCGTTTGTATAGGCATCGCATTTGGAGG
AACTTTACTTGGCGTCATGCTAAGCGCGAGGTTCGGCTTCAGACCGGTGG
CGATGGCGGGCGGAGTCCTGGCGGCGGTTGGCTGCATTCTGACGTACTTC
TCGACCAGTATTGTCCACCTTTACATCACTGTAGGCGTGATGGTTGGCTT
AGGGTCATCTCTTGCTTTCTTCCCGAGCTTAAGTCTGGTGGGGAAATACT
TCGACAAGAAGAGAGCCATTGCCAACGGTATCGCTGTCTCTGGCCCTAGC
GTGGGGAGCATGGTGTTTCCCCCCGTCTTCACGTATCTGATAGAGGAGTA
CGGGTGGAGAGGGTCGTTATTGATTGCTGCCGGAGTCATGCTCAACATCA
CAGCTTTCGCGGCATTGTTGAGGCCGATCCAGCTGCCTGAAAAGCAACTG
TCGTTGCCGTCAGACCGAGCGGAAACAACCTCATTCTCAGAGCTTAATGA
GGTCCCACAGGACCGACCAACTGTCAGAATTAATGAGGGTAAATCGAGCC
TCTCCCGCAGTCATTGGAGGACAGTGATAGCTGAACTCAAGGCTCTGTTA
ACCAATCCTCGTCTAGTTTCCTTCATAACTGCAGACATGTTCTTCTTGGG
GTTTGGCTTCTTCATTCCCGTCGTGCACATCGCGCCGCGCGCACGGCATC
TCGGTCTTGAGCCGTACCAATCGGCGTTCCTTGTTTCCTTGATTGCTATA
GGTGACGTCATAAGTCGGTTTCTGTCGGGATTTCTTCCAACATGTCGGAA
GTTTCGGCATCTTCATTGGTACACACTTTCCCTATTAACGACTGGCATCT
CTTCTCTGTTGTCAACCCTTGCAAAGACTTACCCAGCGCTGGCTGCCTAT
TGCATGGTACTAGGGCTTCTCGAAGGGGCAGGTTTGGCAATTTCACTAAC
CGTCCTAGCGGATCTTGTCGGTCCTACAAGACTCTCTGGTGCAATGGGAC
TGGTGATGTTGCTGATGAGCGTTATAGTAACGGGCGCACCTCCCATCGCA
GGGAAGCTGTACGACTCCACACAAAATTACAACATGTCGTTCATCGTGGC
CGGATGCGGCCCTATTTTTGGAGGACTGATAGCCGCCATCTTGTTGTGCT
TTGGGGACGAGAACGTTCGCCGAGTGTCTGAGAGGCAGAGCCCTCCTACC
GCTTTCGTCAACGGAGCCCGACCCAGCAGCGTCGTCAAGTCAGACGACAA
ACAACTTCTCAAGCCGTTTGTGATCGAAACATCAGTGTAAATGCCTGTAC
GTTATACCAGGCCCTTAGATGGCGGATGGGGGTGGGCGGTGGTTCTAGCC
GTCTTTATGATCGGCGCCTGCAGTTTTGGAGTCATTCGATCCTTCGGCGT
GTTTTTAGAAGAGTTCACAACGCAGTTTGACCAATCAGCTACAGCCACGT
CATTGGTCATCTCCGTTTGTATAGGCATCGCATTTGGAGGAACTTTACTT
GGCGTCATGCTAAGCGCGAGGTTCGGCTTCAGACCGGTGGCGATGGCGGG
CGGAGTCCTGGCGGCGGTTGGCTGCATTCTGACGTACTTCTCGACCAGTA
TTGTCCACCTTTACATCACTGTAGGCGTGATGGTTGGCTTAGGGTCATCT
CTTGCTTTCTTCCCGAGCTTAAGTCTGGTGGGGAAATACTTCGACAAGAA
GAGAGCCATTGCCAACGGTATCGCTGTCTCTGGCCCTAGCGTGGGGAGCA
TGGTGTTTCCCCCCGTCTTCACGTATCTGATAGAGGAGTACGGGTGGAGA
GGGTCGTTATTGATTGCTGCCGGAGTCATGCTCAACATCACAGCTTTCGC
GGCATTGTTGAGGCCGATCCAGCTGCCTGAAAAGCAACTGTCGTTGCCGT
CAGACCGAGCGGAAACAACCTCATTCTCAGAGCTTAATGAGGTCCCACAG
GACCGACCAACTGTCAGAATTAATGAGGGTAAATCGAGCCTCTCCCGCAG
TCATTGGAGGACAGTGATAGCTGAACTCAAGGCTCTGTTAACCAATCCTC
GTCTAGTTTCCTTCATAACTGCAGACATGTTCTTCTTGGGGTTTGGCTTC
TTCATTCCCGTCGTGCACATCGCGCCGCGCGCACGGCATCTCGGTCTTGA
GCCGTACCAATCGGCGTTCCTTGTTTCCTTGATTGCTATAGGTGACGTCA
TAAGTCGGTTTCTGTCGGGATTTCTTCCAACATGTCGGAAGTTTCGGCAT
CTTCATTGGTACACACTTTCCCTATTAACGACTGGCATCTCTTCTCTGTT
GTCAACCCTTGCAAAGACTTACCCAGCGCTGGCTGCCTATTGCATGGTAC
TAGGGCTTCTCGAAGGGGCAGGTTTGGCAATTTCACTAACCGTCCTAGCG
GATCTTGTCGGTCCTACAAGACTCTCTGGTGCAATGGGACTGGTGATGTT
GCTGATGAGCGTTATAGTAACGGGCGCACCTCCCATCGCAGGGAAGCTGT
ACGACTCCACACAAAATTACAACATGTCGTTCATCGTGGCCGGATGCGGC
CCTATTTTTGGAGGACTGATAGCCGCCATCTTGTTGTGCTTTGGGGACGA
GAACGTTCGCCGAGTGTCTGAGAGGCAGAGCCCTCCTACCGCTTTCGTCA
ACGGAGCCCGACCCAGCAGCGTCGTCAAGTCAGACGACAAACAACTTCTC
AAGCCGTTTGTGATCGAAACATCAGTGTAAATGCCTGTACGTTATACCAG
GCCCTTAGATGGCGGATGGGGGTGGGCGGTGGTTCTAGCCGTCTTTATGA
TCGGCGCCTGCAGTTTTGGAGTCATTCGATCCTTCGGCGTGTTTTTAGAA
GAGTTCACAACGCAGTTTGACCAATCAGCTACAGCCACGTCATTGGTCAT
CTCCGTTTGTATAGGCATCGCATTTGGAGGAACTTTACTTGGCGTCATGC
TAAGCGCGAGGTTCGGCTTCAGACCGGTGGCGATGGCGGGCGGAGTCCTG
GCGGCGGTTGGCTGCATTCTGACGTACTTCTCGACCAGTATTGTCCACCT
TTACATCACTGTAGGCGTGATGGTTGGCTTAGGGTCATCTCTTGCTTTCT
TCCCGAGCTTAAGTCTGGTGGGGAAATACTTCGACAAGAAGAGAGCCATT
GCCAACGGTATCGCTGTCTCTGGCCCTAGCGTGGGGAGCATGGTGTTTCC
CCCCGTCTTCACGTATCTGATAGAGGAGTACGGGTGGAGAGGGTCGTTAT
TGATTGCTGCCGGAGTCATGCTCAACATCACAGCTTTCGCGGCATTGTTG
AGGCCGATCCAGCTGCCTGAAAAGCAACTGTCGTTGCCGTCAGACCGAGC
GGAAACAACCTCATTCTCAGAGCTTAATGAGGTCCCACAGGACCGACCAA
CTGTCAGAATTAATGAGGGTAAATCGAGCCTCTCCCGCAGTCATTGGAGG
ACAGTGATAGCTGAACTCAAGGCTCTGTTAACCAATCCTCGTCTAGTTTC
CTTCATAACTGCAGACATGTTCTTCTTGGGGTTTGGCTTCTTCATTCCCG
TCGTGCACATCGCGCCGCGCGCACGGCATCTCGGTCTTGAGCCGTACCAA
TCGGCGTTCCTTGTTTCCTTGATTGCTATAGGTGACGTCATAAGTCGGTT
TCTGTCGGGATTTCTTCCAACATGTCGGAAGTTTCGGCATCTTCATTGGT
ACACACTTTCCCTATTAACGACTGGCATCTCTTCTCTGTTGTCAACCCTT
GCAAAGACTTACCCAGCGCTGGCTGCCTATTGCATGGTACTAGGGCTTCT
CGAAGGGGCAGGTTTGGCAATTTCACTAACCGTCCTAGCGGATCTTGTCG
GTCCTACAAGACTCTCTGGTGCAATGGGACTGGTGATGTTGCTGATGAGC
GTTATAGTAACGGGCGCACCTCCCATCGCAGGGAAGCTGTACGACTCCAC
ACAAAATTACAACATGTCGTTCATCGTGGCCGGATGCGGCCCTATTTTTG
GAGGACTGATAGCCGCCATCTTGTTGTGCTTTGGGGACGAGAACGTTCGC
CGAGTGTCTGAGAGGCAGAGCCCTCCTACCGCTTTCGTCAACGGAGCCCG
ACCCAGCAGCGTCGTCAAGTCAGACGACAAACAACTTCTCAAGCCGTTTG
TGATCGAAACATCAGTGTAAATGCCTGTACGTTATACCAGGCCCTTAGAT
GGCGGATGGGGGTGGGCGGTGGTTCTAGCCGTCTTTATGATCGGCGCCTG
CAGTTTTGGAGTCATTCGATCCTTCGGCGTGTTTTTAGAAGAGTTCACAA
CGCAGTTTGACCAATCAGCTACAGCCACGTCATTGGTCATCTCCGTTTGT
ATAGGCATCGCATTTGGAGGAACTTTACTTGGCGTCATGCTAAGCGCGAG
GTTCGGCTTCAGACCGGTGGCGATGGCGGGCGGAGTCCTGGCGGCGGTTG
GCTGCATTCTGACGTACTTCTCGACCAGTATTGTCCACCTTTACATCACT
GTAGGCGTGATGGTTGGCTTAGGGTCATCTCTTGCTTTCTTCCCGAGCTT
AAGTCTGGTGGGGAAATACTTCGACAAGAAGAGAGCCATTGCCAACGGTA
TCGCTGTCTCTGGCCCTAGCGTGGGGAGCATGGTGTTTCCCCCCGTCTTC
ACGTATCTGATAGAGGAGTACGGGTGGAGAGGGTCGTTATTGATTGCTGC
CGGAGTCATGCTCAACATCACAGCTTTCGCGGCATTGTTGAGGCCGATCC
AGCTGCCTGAAAAGCAACTGTCGTTGCCGTCAGACCGAGCGGAAACAACC
TCATTCTCAGAGCTTAATGAGGTCCCACAGGACCGACCAACTGTCAGAAT
TAATGAGGGTAAATCGAGCCTCTCCCGCAGTCATTGGAGGACAGTGATAG
CTGAACTCAAGGCTCTGTTAACCAATCCTCGTCTAGTTTCCTTCATAACT
GCAGACATGTTCTTCTTGGGGTTTGGCTTCTTCATTCCCGTCGTGCACAT
CGCGCCGCGCGCACGGCATCTCGGTCTTGAGCCGTACCAATCGGCGTTCC
TTGTTTCCTTGATTGCTATAGGTGACGTCATAAGTCGGTTTCTGTCGGGA
TTTCTTCCAACATGTCGGAAGTTTCGGCATCTTCATTGGTACACACTTTC
CCTATTAACGACTGGCATCTCTTCTCTGTTGTCAACCCTTGCAAAGACTT
ACCCAGCGCTGGCTGCCTATTGCATGGTACTAGGGCTTCTCGAAGGGGCA
GGTTTGGCAATTTCACTAACCGTCCTAGCGGATCTTGTCGGTCCTACAAG
ACTCTCTGGTGCAATGGGACTGGTGATGTTGCTGATGAGCGTTATAGTAA
CGGGCGCACCTCCCATCGCAGGGAAGCTGTACGACTCCACACAAAATTAC
AACATGTCGTTCATCGTGGCCGGATGCGGCCCTATTTTTGGAGGACTGAT
AGCCGCCATCTTGTTGTGCTTTGGGGACGAGAACGTTCGCCGAGTGTCTG
AGAGGCAGAGCCCTCCTACCGCTTTCGTCAACGGAGCCCGACCCAGCAGC
GTCGTCAAGTCAGACGACAAACAACTTCTCAAGCCGTTTGTGATCGAAAC
ATCAGTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000156 | genome | Sc0000156:367171..369510 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95840_evm1 |
| Biotype | protein_coding |
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