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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95859_evm0 >transcript:BL95859_evm0-protein ID=transcript:BL95859_evm0-protein|Name=transcript:BL95859_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=262bp
MEAQHIVEYYTAAVVWCVVYGIVFKYISPWLSFRLSKTYRQLTLGQRIDW
DSRITSMLNSLITGPISVYLILSENELGDNPIWGHSRPALHLLAIVVGYT
LTDLPIFLYYYSYWKYMGALEYAGYIAHHVGVLVAYIMCCLTFGNLTYFA
VFRLTCENSTLFVNTKWLLDTKGFSKSSKPYVVNGLALALSFFVFRIATI
PPYWYMVYTVYGTAQYNRLLVLNKYIWIVTCLVLDVLNIKWFSRIVRGAK
RILQKSKQAHSE Run BLAST on NCBI mRNA from alignment at Sc0000168:141852..145086- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95859_evm0 ID=transcript:BL95859_evm0|Name=transcript:BL95859_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=3235bp|location=Sequence derived from alignment at Sc0000168:141852..145086- (Branchiostoma lanceolatum)
ATGGAGGCCCAGCACATTGTGGAGTATTACACAGCGGCAGTGGTGTGGTG
CGTGGTGTATGGCATCGTCTTTAAGTACATCAGCCCCTGGCTGTCTTTCC
GTCTGTCCAAAACCTACAGACAGCTCACGCTTGGACAGAGGATTGACTGG
GACAGCAGGTTAGTGTACTTATCGCGGTTCCTATCAAATCATTGAGATGT
TGCACCAGTCAACTCTTTGACAACGCGTTGTTTTGAAACAAGTTACGAGT
ACATACAGAGACCGGATACAATAGGGTGGATTTTATAGTCATCAACGTCA
GCAACTATAACGTTAACTTGTTATCTATTCTTGCAATTGTTTTAGGATAA
CTTCCATGCTGAATTCCCTGATCACTGGGCCCATCTCCGTCTACCTTATC
CTCAGTGAAAATGAACTGGGCGATAACCCAATATGGTAAGTTATATCGGG
TGGACAGTGATGTATTACCATGCAAGATTGCAATGTGGAAGCAGTAGTAT
TACATGTAGTAGTATCCAGTGAAAATCATGAACAAACACCCACACACCCT
TTATTGAAATCTGCACAAAATCGTCATCTTTCTGACACCATTTGTTAGAT
GAGCTCCACAAAAGATATATTGATGGGGGGGGGGGCGTCTTCATAAGATG
TCTTGTCCAAGATCTATAGTTGTTTTTTTTTCGGGGGAGGGGGCTGGCTG
TTATAGGAATAGGGAAAACGAAGAATGGTGCATGTAGTAGAGACAAAACA
GTCCCAAAAGGCTGGTTTCAGTGACACTTATTATCAAAACTTATGAAAGG
TCCTTTCATAAGTTTTGATAATAAGTGTCACTGAAATTAGGTCTTCAGCT
TGCTTGCGAAGTTGCGATGGGATCTCAGGACTAACAGCTCTCTGTATTTT
GTCTATCGTTCGCTAGGGGTCACTCTCGACCAGCACTGCACCTACTGGCC
ATAGTGGTTGGCTACACTCTGACAGGTGAACTGAAGTTTGTCGTTTGGAA
ACGATTGTTTCATCCAATTATGTTCATCTACAGTCACAAAATTTACATAT
TGTTCAATGCCAATTATTGTCAATAGAAAGTGCCTGATAGATAAAGAAAT
GGCAACAAAAACTTTTGGTAACTGCTATGCAAGGACGTTCCAAGATAGTT
TGAGAACCATGAAAATTTATAACAGAGCCGGAAAAGAAGGTTTATTTTCT
AATATCCTTGCAGTGACTAGCATTGAATACACGTCCTTCAATATAAACCC
AACATCAACAGTTTCTGGGGTATACCTAAGAAAATATATTTCATTTTCTC
CAGATCTGCCAATCTTCCTGTACTACTACTCCTACTGGAAGTACATGGGT
GCCCTGGAGTACGCCGGCTACATAGCGCATCACGTGGGGGTACTGGTGGC
GTACATCATGTGTTGTCTGGTGAGTCCTAANTTTCTCCAGATCTGCTAAA
CTTCCTGTACTACTACTCCTACTGGAAGCACATGGGTGCACTGGAGTACG
CCGGCTACATAGCGCATCACGTGGGGGTACTGGTGGCGTACATCATGTGT
TGTCTGGTGAGTCCTAATAATTGGAATTGTTCTGAATTTACTTTTTTGAA
GTGATGCATTTATTTCATTGAACAGTTAGTGTGTATTGTGCCAAACAGTA
AATAGATATGTTCCGAGGCCTATAACCCTATGTTCCGACGCCCCAATGNT
TGGAGTTGTTCTGAATTTACTTTTTTGAAGTGATGCATTTATTTCATTGG
ACAGTTAGTGTGTATTGTGCCAAACAGTAAATAGATATGTTCCGAGGCCG
ATAACCCTATGTTCCGACGCCCCAATGTTCCGACACCCCTATGTTCCAAC
ACTACAATGTTCCGACAGCCCTATGTTCCGACAGCCCTATGGTCCGACAG
CCCTATGGTCCGACACCCCTATGTTCCGACACCCCTATATTACGACGTCC
CAATGTTCCGACACCCTTTTATTACAACACCCTGGTGTAAGAGGATTGGG
GTTACCGGTTAGGGTTCAAGGTATCGGAACATACTTTCCGTACATAGGGG
TGCAACCAACATATATCATACTTGTAAAACGGTAGACTAAGTCCTGATCA
CATCGCCAAGATTTACACTTAATGTAATCAAGGAGGTTAATTAGACCTCT
ATTCAACCTCCTTGATGTAATTTTGTTGCAGACGTTTGGTAACTTAACTT
ACTTCGCCGTCTTCCGCCTCACCTGTGAAAACTCGACGTTGTTCGTCAAC
ACCAAGTATGTATTCTGTTCTACGATTGACCAGATCCGTGGAACTGTTTT
TTTAAACAGGCTACTTTCCTTAAGAAATGCCCCATAAGCACCAAGGCGTA
AATTTAGTCTTTTCTAGCATGTTTGCTCTTTCTGAACAATTNAACTTAAA
AAATGCCCCATAAGCACCAAGGCGTAAATTTCTAGCATGATTGCTCTTTC
TGAACAATTTGCGTCGATGAAAATTAGAAACCCTGGTAATAGAATACGCA
AGATGACACTTACTCAANTCCTTAAGAAATGCCCCATAAGCACCAAGGCG
TAAATTTAGTCTTTTCTAGCATGTTTGCTCTTTCTGAACAATTTGCGTCG
ATGAAAATTAGAAACCCTGGTAATAGAATACGCAAGATGACACTTACTCA
AGCAGCTGGATTGATTTTCCAAAATCTATCTATTTGCTTGAGCTACTGTT
ATCTTATGTTGCGTAATTTGGCATTTGATGTGTTACACTGCGCGGCCAAC
CGTTTCATACATGTCGCGCTTCCAATTCAAATAAGATTCAAGGCAAATCT
ACATCGCCAAAACATAGACAAACATTTTCTTCACACAAGAAAAGTAAATA
GCTGATCACGATGTAATGGGCCATTATCTTCCTGAAAGAGACAATGTGTG
CTAACATTTCAAAACGGCTTGTCCTGTCTCTTTTTATCGCCAGGTGGCTG
TTGGACACAAAGGGTTTCAGTAAGTCCTCCAAGCCGTACGTGGTGAACGG
CCTAGCGCTCGCCCTGTCCTTTTTCGTGTTCCGGATCGCGACCATCCCGC
CCTACTGGTACATGGTGTATACGGTGTACGGTACCGCACAGTACAACCGA
CTGCTGGTCCTCAACAAGTACATCTGGATAGTCACGTGCCTGGTGCTGGA
CGTCCTCAACATCAAGTGGTTCAGCAGGATCGTCAGAGGCGCAAAGAGAA
TCTTACAGAAGTCGAAACAGGCACACAGCGAATAG Coding sequence (CDS) from alignment at Sc0000168:141852..145086- >transcript:BL95859_evm0 ID=transcript:BL95859_evm0|Name=transcript:BL95859_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=4734bp|location=Sequence derived from alignment at Sc0000168:141852..145086- (Branchiostoma lanceolatum)
ATGGAGGCCCAGCACATTGTGGAGTATTACACAGCGGCAGTGGTGTGGTG
CGTGGTGTATGGCATCGTCTTTAAGTACATCAGCCCCTGGCTGTCTTTCC
GTCTGTCCAAAACCTACAGACAGCTCACGCTTGGACAGAGGATTGACTGG
GACAGCAGGATAACTTCCATGCTGAATTCCCTGATCACTGGGCCCATCTC
CGTCTACCTTATCCTCAGTGAAAATGAACTGGGCGATAACCCAATATGGG
GTCACTCTCGACCAGCACTGCACCTACTGGCCATAGTGGTTGGCTACACT
CTGACAGATCTGCCAATCTTCCTGTACTACTACTCCTACTGGAAGTACAT
GGGTGCCCTGGAGTACGCCGGCTACATAGCGCATCACGTGGGGGTACTGG
TGGCGTACATCATGTGTTGTCTGACGTTTGGTAACTTAACTTACTTCGCC
GTCTTCCGCCTCACCTGTGAAAACTCGACGTTGTTCGTCAACACCAAGTG
GCTGTTGGACACAAAGGGTTTCAGTAAGTCCTCCAAGCCGTACGTGGTGA
ACGGCCTAGCGCTCGCCCTGTCCTTTTTCGTGTTCCGGATCGCGACCATC
CCGCCCTACTGGTACATGGTGTATACGGTGTACGGTACCGCACAGTACAA
CCGACTGCTGGTCCTCAACAAGTACATCTGGATAGTCACGTGCCTGGTGC
TGGACGTCCTCAACATCAAGTGGTTCAGCAGGATCGTCAGAGGCGCAAAG
AGAATCTTACAGAAGTCGAAACAGGCACACAGCGAATAGATGGAGGCCCA
GCACATTGTGGAGTATTACACAGCGGCAGTGGTGTGGTGCGTGGTGTATG
GCATCGTCTTTAAGTACATCAGCCCCTGGCTGTCTTTCCGTCTGTCCAAA
ACCTACAGACAGCTCACGCTTGGACAGAGGATTGACTGGGACAGCAGGAT
AACTTCCATGCTGAATTCCCTGATCACTGGGCCCATCTCCGTCTACCTTA
TCCTCAGTGAAAATGAACTGGGCGATAACCCAATATGGGGTCACTCTCGA
CCAGCACTGCACCTACTGGCCATAGTGGTTGGCTACACTCTGACAGATCT
GCCAATCTTCCTGTACTACTACTCCTACTGGAAGTACATGGGTGCCCTGG
AGTACGCCGGCTACATAGCGCATCACGTGGGGGTACTGGTGGCGTACATC
ATGTGTTGTCTGACGTTTGGTAACTTAACTTACTTCGCCGTCTTCCGCCT
CACCTGTGAAAACTCGACGTTGTTCGTCAACACCAAGTGGCTGTTGGACA
CAAAGGGTTTCAGTAAGTCCTCCAAGCCGTACGTGGTGAACGGCCTAGCG
CTCGCCCTGTCCTTTTTCGTGTTCCGGATCGCGACCATCCCGCCCTACTG
GTACATGGTGTATACGGTGTACGGTACCGCACAGTACAACCGACTGCTGG
TCCTCAACAAGTACATCTGGATAGTCACGTGCCTGGTGCTGGACGTCCTC
AACATCAAGTGGTTCAGCAGGATCGTCAGAGGCGCAAAGAGAATCTTACA
GAAGTCGAAACAGGCACACAGCGAATAGATGGAGGCCCAGCACATTGTGG
AGTATTACACAGCGGCAGTGGTGTGGTGCGTGGTGTATGGCATCGTCTTT
AAGTACATCAGCCCCTGGCTGTCTTTCCGTCTGTCCAAAACCTACAGACA
GCTCACGCTTGGACAGAGGATTGACTGGGACAGCAGGATAACTTCCATGC
TGAATTCCCTGATCACTGGGCCCATCTCCGTCTACCTTATCCTCAGTGAA
AATGAACTGGGCGATAACCCAATATGGGGTCACTCTCGACCAGCACTGCA
CCTACTGGCCATAGTGGTTGGCTACACTCTGACAGATCTGCCAATCTTCC
TGTACTACTACTCCTACTGGAAGTACATGGGTGCCCTGGAGTACGCCGGC
TACATAGCGCATCACGTGGGGGTACTGGTGGCGTACATCATGTGTTGTCT
GACGTTTGGTAACTTAACTTACTTCGCCGTCTTCCGCCTCACCTGTGAAA
ACTCGACGTTGTTCGTCAACACCAAGTGGCTGTTGGACACAAAGGGTTTC
AGTAAGTCCTCCAAGCCGTACGTGGTGAACGGCCTAGCGCTCGCCCTGTC
CTTTTTCGTGTTCCGGATCGCGACCATCCCGCCCTACTGGTACATGGTGT
ATACGGTGTACGGTACCGCACAGTACAACCGACTGCTGGTCCTCAACAAG
TACATCTGGATAGTCACGTGCCTGGTGCTGGACGTCCTCAACATCAAGTG
GTTCAGCAGGATCGTCAGAGGCGCAAAGAGAATCTTACAGAAGTCGAAAC
AGGCACACAGCGAATAGATGGAGGCCCAGCACATTGTGGAGTATTACACA
GCGGCAGTGGTGTGGTGCGTGGTGTATGGCATCGTCTTTAAGTACATCAG
CCCCTGGCTGTCTTTCCGTCTGTCCAAAACCTACAGACAGCTCACGCTTG
GACAGAGGATTGACTGGGACAGCAGGATAACTTCCATGCTGAATTCCCTG
ATCACTGGGCCCATCTCCGTCTACCTTATCCTCAGTGAAAATGAACTGGG
CGATAACCCAATATGGGGTCACTCTCGACCAGCACTGCACCTACTGGCCA
TAGTGGTTGGCTACACTCTGACAGATCTGCCAATCTTCCTGTACTACTAC
TCCTACTGGAAGTACATGGGTGCCCTGGAGTACGCCGGCTACATAGCGCA
TCACGTGGGGGTACTGGTGGCGTACATCATGTGTTGTCTGACGTTTGGTA
ACTTAACTTACTTCGCCGTCTTCCGCCTCACCTGTGAAAACTCGACGTTG
TTCGTCAACACCAAGTGGCTGTTGGACACAAAGGGTTTCAGTAAGTCCTC
CAAGCCGTACGTGGTGAACGGCCTAGCGCTCGCCCTGTCCTTTTTCGTGT
TCCGGATCGCGACCATCCCGCCCTACTGGTACATGGTGTATACGGTGTAC
GGTACCGCACAGTACAACCGACTGCTGGTCCTCAACAAGTACATCTGGAT
AGTCACGTGCCTGGTGCTGGACGTCCTCAACATCAAGTGGTTCAGCAGGA
TCGTCAGAGGCGCAAAGAGAATCTTACAGAAGTCGAAACAGGCACACAGC
GAATAGATGGAGGCCCAGCACATTGTGGAGTATTACACAGCGGCAGTGGT
GTGGTGCGTGGTGTATGGCATCGTCTTTAAGTACATCAGCCCCTGGCTGT
CTTTCCGTCTGTCCAAAACCTACAGACAGCTCACGCTTGGACAGAGGATT
GACTGGGACAGCAGGATAACTTCCATGCTGAATTCCCTGATCACTGGGCC
CATCTCCGTCTACCTTATCCTCAGTGAAAATGAACTGGGCGATAACCCAA
TATGGGGTCACTCTCGACCAGCACTGCACCTACTGGCCATAGTGGTTGGC
TACACTCTGACAGATCTGCCAATCTTCCTGTACTACTACTCCTACTGGAA
GTACATGGGTGCCCTGGAGTACGCCGGCTACATAGCGCATCACGTGGGGG
TACTGGTGGCGTACATCATGTGTTGTCTGACGTTTGGTAACTTAACTTAC
TTCGCCGTCTTCCGCCTCACCTGTGAAAACTCGACGTTGTTCGTCAACAC
CAAGTGGCTGTTGGACACAAAGGGTTTCAGTAAGTCCTCCAAGCCGTACG
TGGTGAACGGCCTAGCGCTCGCCCTGTCCTTTTTCGTGTTCCGGATCGCG
ACCATCCCGCCCTACTGGTACATGGTGTATACGGTGTACGGTACCGCACA
GTACAACCGACTGCTGGTCCTCAACAAGTACATCTGGATAGTCACGTGCC
TGGTGCTGGACGTCCTCAACATCAAGTGGTTCAGCAGGATCGTCAGAGGC
GCAAAGAGAATCTTACAGAAGTCGAAACAGGCACACAGCGAATAGATGGA
GGCCCAGCACATTGTGGAGTATTACACAGCGGCAGTGGTGTGGTGCGTGG
TGTATGGCATCGTCTTTAAGTACATCAGCCCCTGGCTGTCTTTCCGTCTG
TCCAAAACCTACAGACAGCTCACGCTTGGACAGAGGATTGACTGGGACAG
CAGGATAACTTCCATGCTGAATTCCCTGATCACTGGGCCCATCTCCGTCT
ACCTTATCCTCAGTGAAAATGAACTGGGCGATAACCCAATATGGGGTCAC
TCTCGACCAGCACTGCACCTACTGGCCATAGTGGTTGGCTACACTCTGAC
AGATCTGCCAATCTTCCTGTACTACTACTCCTACTGGAAGTACATGGGTG
CCCTGGAGTACGCCGGCTACATAGCGCATCACGTGGGGGTACTGGTGGCG
TACATCATGTGTTGTCTGACGTTTGGTAACTTAACTTACTTCGCCGTCTT
CCGCCTCACCTGTGAAAACTCGACGTTGTTCGTCAACACCAAGTGGCTGT
TGGACACAAAGGGTTTCAGTAAGTCCTCCAAGCCGTACGTGGTGAACGGC
CTAGCGCTCGCCCTGTCCTTTTTCGTGTTCCGGATCGCGACCATCCCGCC
CTACTGGTACATGGTGTATACGGTGTACGGTACCGCACAGTACAACCGAC
TGCTGGTCCTCAACAAGTACATCTGGATAGTCACGTGCCTGGTGCTGGAC
GTCCTCAACATCAAGTGGTTCAGCAGGATCGTCAGAGGCGCAAAGAGAAT
CTTACAGAAGTCGAAACAGGCACACAGCGAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000168 | genome | Sc0000168:141852..145086 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95859_evm0 |
| Biotype | protein_coding |
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