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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95893_evm1 >transcript:BL95893_evm1-protein ID=transcript:BL95893_evm1-protein|Name=transcript:BL95893_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=249bp
MEVLTSAEELVNEAVGTKTIRRYLTTAARVLIVLAFMDDIYTQQYSWWSN
VHYFAEIWGVSRALAGPILGLLVTAEFFGTLLILTQQRFEVGCGALFCGT
VFQLIFFRHYKKTSGVMRDLSLCGCVTMMMLEHWTDPGRVLVGLMFVRLA
THLGSRNVLLLFGYLLLCGVILGFKTRVCAGLLSALFFLTNLTVCSWWLE
ESDSPEQEFLRSEFFLNLAAIGGLLLETVVGPGKASMDAQKGRRVSRSQ Run BLAST on NCBI mRNA from alignment at Sc0000198:329710..332772- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95893_evm1 ID=transcript:BL95893_evm1|Name=transcript:BL95893_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3063bp|location=Sequence derived from alignment at Sc0000198:329710..332772- (Branchiostoma lanceolatum)
ATGGAGGTCCTAACCAGCGCAGAAGAACTCGTCAACGAGGTTAGAGACTG
TTTTGATGTACGTTGATCTCTTGATTACGAATGGTTTATCCTATGATAGC
GCCCTATTTTTTAAAATGACTGATGTCGCAAGTCGTGCGGCTTGTGATAC
TGGTGAACTTATTTATTTGCCACTGATCAAATAACAAGGTCGAAATGAGC
GTTGTTTTTGTTATTTCATATCTGCCCTTTATTACAAACCTACACTTTGT
GATAATTAGTACTAAATGGCCATTGATCCTCAACGTCTCATTCAGTAAAT
GGAGGAAAATCCGCCATTCTATTGACAGTGATATTCAGCAAACGTATTGT
CGTATTTTTCCTCTCCACAATATGTGGAATTTCAGTTCAGCAGGATCTCA
TTGACACACGTGAATAAAAACGTGTTCTCACATACACAGTACATAGACAG
TTCTTCCCGTGCATGTGGTTCTGTGCCACATACACAGGCTCAGGCCGATG
ACGTGTCCTGCTAAATACCTGCTCGTCCACAATGTTTTCCGGTCAATTGA
ACCCAATTTATAGATGAGGCCTTAATTGTCACATTGTTGTTCTGTTAAAC
AAAATAACAAAATGGACCAATTTTGTCCTAATGGCATGGCGACAGGACAA
TGGGGACAAGAAGCAGATGCCGACATAGATCATAGTACGGTAGAAGTGAA
GAAAAAATGGTACAGAAAGTTTATTTTTCAATATCTAGCAGAAGAATGTT
AGAGAGAATATCGAACTCATCGTGCCTTGCCCTATTGGAAGGCCGAATCC
CTGGGTATAAATGATAAGGCACATGCATGCATTCCATAACTTCGGTTAGG
ATGTACATGTACTTACTTTGTTTGTTTGTTTATGTGTTCCTTGTCTGTTT
GTACCCCAGGCGGTCGGCACGAAAACGATCCGCAGGTACCTGACCACGGC
CGCCCGCGTTCTGATCGTCCTCGCGTTCATGGACGACATCTACACCCAGC
AGTACAGCTGGTGGTCTAATGTGCACTACTTCGCAGAGGTTCGTGGAACG
ATACTGGCAGGAATTGTCGTTGCAAGTACTACTACATGTAGTGTTGTACA
TGAATGAATACATATGCATATGCACTTTATCGTGGTTGTAAGACGATTTG
ATGCTCGAAGCACAACCATTTAAGTAATGATTGCAGTAAGAATGGAAGGC
GAAAATTGCTCTGATCTGAGCTGAGTACCCTTACAACGCTCAGAATGTTT
TTAGTCTGTAGTTGAAATTTCTCAACAATGTCTTTTGAACTTTTATGTCA
GATTTGGGGCGTGTCGAGAGCGTTGGCTGGTCCCATACTCGGCCTGTTGG
TGACTGCTGAGTTTTTTGGAACTTTGCTGATTCTAACTCAGCAGAGATTT
GAGGTCGGATGTGGGGCCTTGTTTTGTGGGACGGTTTTTCAGGTGAGCTT
TTTCGCTCATACAACATATATGAAGTGAAGGTATACAAAGGTAGAGAAGT
AGTCTTATTCAAGTAGTAGTATTATTTAGCGAACTGTGGTGTCTATCTCT
CCCTCCTGCCTGTCCTTCGTTTTGTTCCAATAAGGATGTTACTTTCTGTT
CCAGTTAATCTTCTTCCGACACTACAAGAAAACCTCTGGTGTAATGAGGT
AAGTGTTGTTGGACACTCCGTTGTTAGACAAGTATATTAGAATTCCTTAT
CATCGGCGATAGTTCTGGAATAACTCACAAAGTTTTTCATTGGTTGCTCT
GACTGTTTTGATAGTTAAAAGTAATGTCTAGACCTTGGTTATAGGAATAG
ATTATACAAAATGGCCTTCTTNAGATTATACAAAATGGCTTTCTTTCTCT
TTATCTCACCTGACCAGAGACCTGTCCCTGTGCGGCTGCGTTACCATGAT
GATGTTGGAACACTGGACGGACCCCGGTACCATGGAACCCGGGCCGCCAT
CTTTGAAATGGGACGGGAAATGGCGGACCATCATGCAACTTGCAGGGAAG
CCTCTGGCCTTTTATCTTACCCAATGATCATGTACCATGTTTAGCAGTGT
GTTAGATAAAACGATCGCGAGTAACGTTATCAACGTAATGAATATTTGTG
TCACAGGGTATTCAATTACATCAGAACCCAATAAAGTTCAGAGAATAACT
ATTTCTTCACCCATCAGGGCGCGTCCTGGTAGGTTTGATGTTCGTGCGTC
TTGCCACTCATCTTGGGTCACGAAACGTCTTGCTGCTGTTCGGGTACCTC
CTGCTATGTGGCGTTATCCTCGGATTTAAGACCCGCGTGTGTGCGGGACT
TCTATCGGCCCTGGTAGGTCACGGTGTCTTTCTTCATTCAACAGAATCAG
GATAGGGAAATTTACATGAAGTTTAGAGAAGAAAAGTAAAGACCAATTAT
CGGTATGAGCAATGTAAGAGTCATTGCCAATAGACTATCGATGCGCGTGC
GACAGTAAAGTCTCCAAGCAGGTTTGCCAGGGCAAGACAGTATCTAAAGG
GCTAAAACAAAACGGGCCAATTGGATCGTGTTTTAGCCCTTTGGATACTG
CCTTGCCCCGGCAGATCTGCTAGCGGATTACGACGGTACTAGTGATAGAT
GTACGTTCATGACATAAGGTTAGTCGCTTGGGTTTCATCACTTTGAGATC
CTTTGAAGCTGACTTGTTATAGCCTCCGTTGCAGACACCTTCCGGCTGTT
TTCATTTTCTTAGTTCCAGTTTTACTATAACATTCTTTTCTTGTTGTAGG
CCGGCCAGCAATAAGAAAAAAAATGTAATAGTATAAAAACAATAACTTGA
AAAGAAAACAGCCGGGAGGAGTCTGCATCGGAGGCTAGACTTGATACGCC
CCTTCTCCCTTCTTCCTGCAGTTCTTCCTGACGAACCTGACCGTGTGTTC
CTGGTGGCTGGAGGAGTCCGACTCCCCCGAGCAGGAGTTCCTGCGGTCCG
AGTTCTTCCTGAACCTCGCAGCGATTGGCGGGCTGCTGCTGGAGACCGTA
GTGGGGCCGGGGAAGGCCTCCATGGACGCTCAGAAGGGCAGGAGGGTCAG
CAGATCACAGTAG Coding sequence (CDS) from alignment at Sc0000198:329710..332772- >transcript:BL95893_evm1 ID=transcript:BL95893_evm1|Name=transcript:BL95893_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=5250bp|location=Sequence derived from alignment at Sc0000198:329710..332772- (Branchiostoma lanceolatum)
ATGGAGGTCCTAACCAGCGCAGAAGAACTCGTCAACGAGGCGGTCGGCAC
GAAAACGATCCGCAGGTACCTGACCACGGCCGCCCGCGTTCTGATCGTCC
TCGCGTTCATGGACGACATCTACACCCAGCAGTACAGCTGGTGGTCTAAT
GTGCACTACTTCGCAGAGATTTGGGGCGTGTCGAGAGCGTTGGCTGGTCC
CATACTCGGCCTGTTGGTGACTGCTGAGTTTTTTGGAACTTTGCTGATTC
TAACTCAGCAGAGATTTGAGGTCGGATGTGGGGCCTTGTTTTGTGGGACG
GTTTTTCAGTTAATCTTCTTCCGACACTACAAGAAAACCTCTGGTGTAAT
GAGAGACCTGTCCCTGTGCGGCTGCGTTACCATGATGATGTTGGAACACT
GGACGGACCCCGGGCGCGTCCTGGTAGGTTTGATGTTCGTGCGTCTTGCC
ACTCATCTTGGGTCACGAAACGTCTTGCTGCTGTTCGGGTACCTCCTGCT
ATGTGGCGTTATCCTCGGATTTAAGACCCGCGTGTGTGCGGGACTTCTAT
CGGCCCTGTTCTTCCTGACGAACCTGACCGTGTGTTCCTGGTGGCTGGAG
GAGTCCGACTCCCCCGAGCAGGAGTTCCTGCGGTCCGAGTTCTTCCTGAA
CCTCGCAGCGATTGGCGGGCTGCTGCTGGAGACCGTAGTGGGGCCGGGGA
AGGCCTCCATGGACGCTCAGAAGGGCAGGAGGGTCAGCAGATCACAGTAG
ATGGAGGTCCTAACCAGCGCAGAAGAACTCGTCAACGAGGCGGTCGGCAC
GAAAACGATCCGCAGGTACCTGACCACGGCCGCCCGCGTTCTGATCGTCC
TCGCGTTCATGGACGACATCTACACCCAGCAGTACAGCTGGTGGTCTAAT
GTGCACTACTTCGCAGAGATTTGGGGCGTGTCGAGAGCGTTGGCTGGTCC
CATACTCGGCCTGTTGGTGACTGCTGAGTTTTTTGGAACTTTGCTGATTC
TAACTCAGCAGAGATTTGAGGTCGGATGTGGGGCCTTGTTTTGTGGGACG
GTTTTTCAGTTAATCTTCTTCCGACACTACAAGAAAACCTCTGGTGTAAT
GAGAGACCTGTCCCTGTGCGGCTGCGTTACCATGATGATGTTGGAACACT
GGACGGACCCCGGGCGCGTCCTGGTAGGTTTGATGTTCGTGCGTCTTGCC
ACTCATCTTGGGTCACGAAACGTCTTGCTGCTGTTCGGGTACCTCCTGCT
ATGTGGCGTTATCCTCGGATTTAAGACCCGCGTGTGTGCGGGACTTCTAT
CGGCCCTGTTCTTCCTGACGAACCTGACCGTGTGTTCCTGGTGGCTGGAG
GAGTCCGACTCCCCCGAGCAGGAGTTCCTGCGGTCCGAGTTCTTCCTGAA
CCTCGCAGCGATTGGCGGGCTGCTGCTGGAGACCGTAGTGGGGCCGGGGA
AGGCCTCCATGGACGCTCAGAAGGGCAGGAGGGTCAGCAGATCACAGTAG
ATGGAGGTCCTAACCAGCGCAGAAGAACTCGTCAACGAGGCGGTCGGCAC
GAAAACGATCCGCAGGTACCTGACCACGGCCGCCCGCGTTCTGATCGTCC
TCGCGTTCATGGACGACATCTACACCCAGCAGTACAGCTGGTGGTCTAAT
GTGCACTACTTCGCAGAGATTTGGGGCGTGTCGAGAGCGTTGGCTGGTCC
CATACTCGGCCTGTTGGTGACTGCTGAGTTTTTTGGAACTTTGCTGATTC
TAACTCAGCAGAGATTTGAGGTCGGATGTGGGGCCTTGTTTTGTGGGACG
GTTTTTCAGTTAATCTTCTTCCGACACTACAAGAAAACCTCTGGTGTAAT
GAGAGACCTGTCCCTGTGCGGCTGCGTTACCATGATGATGTTGGAACACT
GGACGGACCCCGGGCGCGTCCTGGTAGGTTTGATGTTCGTGCGTCTTGCC
ACTCATCTTGGGTCACGAAACGTCTTGCTGCTGTTCGGGTACCTCCTGCT
ATGTGGCGTTATCCTCGGATTTAAGACCCGCGTGTGTGCGGGACTTCTAT
CGGCCCTGTTCTTCCTGACGAACCTGACCGTGTGTTCCTGGTGGCTGGAG
GAGTCCGACTCCCCCGAGCAGGAGTTCCTGCGGTCCGAGTTCTTCCTGAA
CCTCGCAGCGATTGGCGGGCTGCTGCTGGAGACCGTAGTGGGGCCGGGGA
AGGCCTCCATGGACGCTCAGAAGGGCAGGAGGGTCAGCAGATCACAGTAG
ATGGAGGTCCTAACCAGCGCAGAAGAACTCGTCAACGAGGCGGTCGGCAC
GAAAACGATCCGCAGGTACCTGACCACGGCCGCCCGCGTTCTGATCGTCC
TCGCGTTCATGGACGACATCTACACCCAGCAGTACAGCTGGTGGTCTAAT
GTGCACTACTTCGCAGAGATTTGGGGCGTGTCGAGAGCGTTGGCTGGTCC
CATACTCGGCCTGTTGGTGACTGCTGAGTTTTTTGGAACTTTGCTGATTC
TAACTCAGCAGAGATTTGAGGTCGGATGTGGGGCCTTGTTTTGTGGGACG
GTTTTTCAGTTAATCTTCTTCCGACACTACAAGAAAACCTCTGGTGTAAT
GAGAGACCTGTCCCTGTGCGGCTGCGTTACCATGATGATGTTGGAACACT
GGACGGACCCCGGGCGCGTCCTGGTAGGTTTGATGTTCGTGCGTCTTGCC
ACTCATCTTGGGTCACGAAACGTCTTGCTGCTGTTCGGGTACCTCCTGCT
ATGTGGCGTTATCCTCGGATTTAAGACCCGCGTGTGTGCGGGACTTCTAT
CGGCCCTGTTCTTCCTGACGAACCTGACCGTGTGTTCCTGGTGGCTGGAG
GAGTCCGACTCCCCCGAGCAGGAGTTCCTGCGGTCCGAGTTCTTCCTGAA
CCTCGCAGCGATTGGCGGGCTGCTGCTGGAGACCGTAGTGGGGCCGGGGA
AGGCCTCCATGGACGCTCAGAAGGGCAGGAGGGTCAGCAGATCACAGTAG
ATGGAGGTCCTAACCAGCGCAGAAGAACTCGTCAACGAGGCGGTCGGCAC
GAAAACGATCCGCAGGTACCTGACCACGGCCGCCCGCGTTCTGATCGTCC
TCGCGTTCATGGACGACATCTACACCCAGCAGTACAGCTGGTGGTCTAAT
GTGCACTACTTCGCAGAGATTTGGGGCGTGTCGAGAGCGTTGGCTGGTCC
CATACTCGGCCTGTTGGTGACTGCTGAGTTTTTTGGAACTTTGCTGATTC
TAACTCAGCAGAGATTTGAGGTCGGATGTGGGGCCTTGTTTTGTGGGACG
GTTTTTCAGTTAATCTTCTTCCGACACTACAAGAAAACCTCTGGTGTAAT
GAGAGACCTGTCCCTGTGCGGCTGCGTTACCATGATGATGTTGGAACACT
GGACGGACCCCGGGCGCGTCCTGGTAGGTTTGATGTTCGTGCGTCTTGCC
ACTCATCTTGGGTCACGAAACGTCTTGCTGCTGTTCGGGTACCTCCTGCT
ATGTGGCGTTATCCTCGGATTTAAGACCCGCGTGTGTGCGGGACTTCTAT
CGGCCCTGTTCTTCCTGACGAACCTGACCGTGTGTTCCTGGTGGCTGGAG
GAGTCCGACTCCCCCGAGCAGGAGTTCCTGCGGTCCGAGTTCTTCCTGAA
CCTCGCAGCGATTGGCGGGCTGCTGCTGGAGACCGTAGTGGGGCCGGGGA
AGGCCTCCATGGACGCTCAGAAGGGCAGGAGGGTCAGCAGATCACAGTAG
ATGGAGGTCCTAACCAGCGCAGAAGAACTCGTCAACGAGGCGGTCGGCAC
GAAAACGATCCGCAGGTACCTGACCACGGCCGCCCGCGTTCTGATCGTCC
TCGCGTTCATGGACGACATCTACACCCAGCAGTACAGCTGGTGGTCTAAT
GTGCACTACTTCGCAGAGATTTGGGGCGTGTCGAGAGCGTTGGCTGGTCC
CATACTCGGCCTGTTGGTGACTGCTGAGTTTTTTGGAACTTTGCTGATTC
TAACTCAGCAGAGATTTGAGGTCGGATGTGGGGCCTTGTTTTGTGGGACG
GTTTTTCAGTTAATCTTCTTCCGACACTACAAGAAAACCTCTGGTGTAAT
GAGAGACCTGTCCCTGTGCGGCTGCGTTACCATGATGATGTTGGAACACT
GGACGGACCCCGGGCGCGTCCTGGTAGGTTTGATGTTCGTGCGTCTTGCC
ACTCATCTTGGGTCACGAAACGTCTTGCTGCTGTTCGGGTACCTCCTGCT
ATGTGGCGTTATCCTCGGATTTAAGACCCGCGTGTGTGCGGGACTTCTAT
CGGCCCTGTTCTTCCTGACGAACCTGACCGTGTGTTCCTGGTGGCTGGAG
GAGTCCGACTCCCCCGAGCAGGAGTTCCTGCGGTCCGAGTTCTTCCTGAA
CCTCGCAGCGATTGGCGGGCTGCTGCTGGAGACCGTAGTGGGGCCGGGGA
AGGCCTCCATGGACGCTCAGAAGGGCAGGAGGGTCAGCAGATCACAGTAG
ATGGAGGTCCTAACCAGCGCAGAAGAACTCGTCAACGAGGCGGTCGGCAC
GAAAACGATCCGCAGGTACCTGACCACGGCCGCCCGCGTTCTGATCGTCC
TCGCGTTCATGGACGACATCTACACCCAGCAGTACAGCTGGTGGTCTAAT
GTGCACTACTTCGCAGAGATTTGGGGCGTGTCGAGAGCGTTGGCTGGTCC
CATACTCGGCCTGTTGGTGACTGCTGAGTTTTTTGGAACTTTGCTGATTC
TAACTCAGCAGAGATTTGAGGTCGGATGTGGGGCCTTGTTTTGTGGGACG
GTTTTTCAGTTAATCTTCTTCCGACACTACAAGAAAACCTCTGGTGTAAT
GAGAGACCTGTCCCTGTGCGGCTGCGTTACCATGATGATGTTGGAACACT
GGACGGACCCCGGGCGCGTCCTGGTAGGTTTGATGTTCGTGCGTCTTGCC
ACTCATCTTGGGTCACGAAACGTCTTGCTGCTGTTCGGGTACCTCCTGCT
ATGTGGCGTTATCCTCGGATTTAAGACCCGCGTGTGTGCGGGACTTCTAT
CGGCCCTGTTCTTCCTGACGAACCTGACCGTGTGTTCCTGGTGGCTGGAG
GAGTCCGACTCCCCCGAGCAGGAGTTCCTGCGGTCCGAGTTCTTCCTGAA
CCTCGCAGCGATTGGCGGGCTGCTGCTGGAGACCGTAGTGGGGCCGGGGA
AGGCCTCCATGGACGCTCAGAAGGGCAGGAGGGTCAGCAGATCACAGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000198 | genome | Sc0000198:329710..332772 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95893_evm1 |
| Biotype | protein_coding |
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