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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95894_evm0 >transcript:BL95894_evm0-protein ID=transcript:BL95894_evm0-protein|Name=transcript:BL95894_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=259bp
MATHSVFRFLKRNLPVIARLLLMMTFFDDGLRMIYNWTNQTRYFQHSWKI
SASVAGIAVSLNMAGQLAGCVLVLARRKVEWGCGILFANVIFQAVMYEYF
KYAKYILRSLSLTGCVLLLLLDHWAERKSMDPGLLKVKKEDRTRMLLQLA
GRCLVGFMFVSLAQLGPSYPVLFITMAGYVLLVCVIVGFRTRQCAIILAL
QFFLVTLFTRTWWLKPWDSTDRDFVKYEFFQAMSAVGGLLQEAVVGPGRA
SLDERKKDE Run BLAST on NCBI mRNA from alignment at Sc0000198:333752..336544- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95894_evm0 ID=transcript:BL95894_evm0|Name=transcript:BL95894_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2793bp|location=Sequence derived from alignment at Sc0000198:333752..336544- (Branchiostoma lanceolatum)
ATGGCAACACACTCAGTATCTGACCTTAGGTCAGCAGCCTTTAGTTAGAT
GTAGTTATCGAGGAAACTCTGTAAGCTTGACCACAAAGTCGTCGAAATCC
CAAAAAGGTTAATCTTCAAAGCGATAATTTAAGAACTGCGTTGAGTAAAC
GTCTGAGCATGGACAGGTGTCGTCTGGTTCACTCTTGTGGATACGGCATG
TGCATGTGCCGTTACTTCGATAGTTATGATGAGTTGTATTTTCTTATCAA
TGTAGACTTCACTGTCATTAAACAAAGGTCGAAAGCATAGTATTTTTGCG
ATGAATTTGATTATAACAACTCTAGAATAGATTTAAAGTACTTTAAGTTC
GCGTGGTTTATACTTCGCGCTAAGGCGAAAATGTGGTGTTCGCTGTGGTT
TTAAGTTTGCGACAGTATGTAGTCACATACTGCTACAGTATTGGATGAAA
ATGTTCGCGGTGGTTTTAAGTTCGCGATGAAACGTCGCCGCGAAAACCGC
GAGCATAAAACCACCGCGAACATTTCTGCATTTACAGTATAGTTTAGTCG
CTATTCCCCTGACTGTGTTCCCAGGTGTTCCGGTTCTTGAAGAGGAATCT
GCCCGTCATCGCCCGTCTGCTGCTCATGATGACGTTTTTCGATGACGGCC
TGCGGATGATCTACAACTGGACCAACCAGGTCTGAATATGTACATCTCAT
GCAAGCGTCTTGTACAAACCACCACACATATCCCTAATCGGACACGTTAT
GAGAGTTTTAGCTTTATTACGGTCATGTCAGAGAACGGCCATCACTGAAG
ATGCTAAACTTGAAAGCATCTTCTATCATGCTTAGGATAGGAGTTTGGTG
TTGCATATGTTCTGCGATCCGGGTTCAATACTCAATGAAGATGGAGTGAC
GCGCGCCCACACAGCCTCTTCGGCTGATCTGTCAAATGTGTGCCAAAAAC
ACACGCAGGTTCGCCAACATCTGCACATGTGCCACCAAGAACCGCATTTT
TTTTTTCAAATCATTGAGCAGTCAAGTTGATACGTGCGGTAGATGGATAG
ACTGAAGTATCATTGAATCCAACACGTTTTTCTGCACACATACTAGACGC
GGTACTTCCAGCACTCCTGGAAGATCAGCGCCTCTGTAGCCGGCATCGCC
GTGTCCCTGAACATGGCCGGGCAGCTGGCGGGCTGCGTGCTGGTCCTGGC
CAGGAGGAAGGTCGAGTGGGGGTGTGGCATCCTGTTTGCCAACGTCATCT
TCCAGGTGCGCTTCAATCAAATATTTTCTTTTGTCCGAGTCTAATTTGGA
ATGATAGGACAAAAGTTTTTTGTTTTCACAGTCCGTCATAATCATTGTGA
TTTACATGTATGTAGAAAGAAATATTTTCGCTCTGTTTCATGTTAGTTTT
CTGACCTTGTTTGTAAAACGTGAAAAACTAAAATACTACATACTAATGAA
CCAGAACACCACATACTATGTACCAAAACAGTACAAAGTATGATTGTATA
CCATAGTTGTGCAAGTCTATTTTGGAATGATAGGACAAAAGCTTTGTGTA
GTCACTGTCCGTCATAATCATGACATGGTGGGTTTATCTAGCAAGAGATA
TGTTCGCCCTATTTCATGTTCGTCTTCTGACCTTGTTTGCTCTCTCTTAC
AGGCAGTCATGTATGAATATTTTAAGTACGCCAAATATATTCTGAGGTAA
GTGACGATATTGTATATATTCTGAAAGAAAGGACAGGTAGAATATTTAAG
ATATGTATGCTAAAAACGGTGGCATTGTTCTGCAATAGAATGCAATTGCA
AGTACATTGCGTCAAGCAGGGATACGAGAACTGTAAAACGTTTGGATGAG
AAAGACCATGAAAAGACGGCTCTCTATTTTGTCGGACGTCTTCATATGCA
ACACTCAAAGACCACGTGTGTTCGTTGCAGAAGTCTGTCCCTAACCGGCT
GTGTGCTGCTGCTGCTGTTGGACCACTGGGCCGAGCGGAAGAGCATGGAT
CCCGGACTTCTCAAGGTCAAGAAGGAGGACAGGACCCGGATGTTGCTCCA
ACTAGCAGGTACGGCAAATATCATGAAAACTCTGATAGGCACGTTAAATG
AAACTGACATTTCGTAATTTATACCTTTTTTACCGATTACAGAGACTAGG
TAAGCCCGAAACAGACGTAAATGCAGATTAATCAACAGGACTGTGATAAA
TCTGATAGTTTTTTTTCCTAATTTGGCCAACGTTTGGTATCTTTTGTCTC
CCTAGGCCGTTGTCTGGTAGGTTTCATGTTCGTGTCGCTGGCTCAGCTCG
GTCCCAGCTATCCCGTCCTGTTCATCACCATGGCGGGGTACGTGCTGCTC
GTCTGCGTTATAGTCGGCTTCAGGACCAGGCAATGTGCCATCATTCTGGC
CCTGCAGGTAGATCATGAAAAATCTATTATCTGTTTGTCTTTCTTCCTTT
CTGTTTGCTTGCTTGGTTGCTTGCTTGGTTGCTTGGTTGTTTGGTTGCTT
GCTTGCTTGCTTGCTTGCTTGCTTGCTTGCTTGCCCGTGAGAGCAACATC
GAGAGAACCATTGTGGAATCAACAAAGCGTACTTATCCAATATCGATCTC
TCTGATTTTATTCCAGTTTTTCCTGGTGACTCTGTTTACGCGGACCTGGT
GGCTGAAGCCGTGGGACAGTACCGACAGGGACTTTGTGAAGTACGAGTTT
TTCCAGGCGATGTCGGCGGTGGGCGGGCTGCTGCAGGAGGCGGTGGTGGG
GCCGGGCAGGGCCTCACTGGACGAACGGAAGAAGGACGAATAA Coding sequence (CDS) from alignment at Sc0000198:333752..336544- >transcript:BL95894_evm0 ID=transcript:BL95894_evm0|Name=transcript:BL95894_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=5460bp|location=Sequence derived from alignment at Sc0000198:333752..336544- (Branchiostoma lanceolatum)
ATGGCAACACACTCAGTGTTCCGGTTCTTGAAGAGGAATCTGCCCGTCAT
CGCCCGTCTGCTGCTCATGATGACGTTTTTCGATGACGGCCTGCGGATGA
TCTACAACTGGACCAACCAGACGCGGTACTTCCAGCACTCCTGGAAGATC
AGCGCCTCTGTAGCCGGCATCGCCGTGTCCCTGAACATGGCCGGGCAGCT
GGCGGGCTGCGTGCTGGTCCTGGCCAGGAGGAAGGTCGAGTGGGGGTGTG
GCATCCTGTTTGCCAACGTCATCTTCCAGGCAGTCATGTATGAATATTTT
AAGTACGCCAAATATATTCTGAGAAGTCTGTCCCTAACCGGCTGTGTGCT
GCTGCTGCTGTTGGACCACTGGGCCGAGCGGAAGAGCATGGATCCCGGAC
TTCTCAAGGTCAAGAAGGAGGACAGGACCCGGATGTTGCTCCAACTAGCA
GGCCGTTGTCTGGTAGGTTTCATGTTCGTGTCGCTGGCTCAGCTCGGTCC
CAGCTATCCCGTCCTGTTCATCACCATGGCGGGGTACGTGCTGCTCGTCT
GCGTTATAGTCGGCTTCAGGACCAGGCAATGTGCCATCATTCTGGCCCTG
CAGTTTTTCCTGGTGACTCTGTTTACGCGGACCTGGTGGCTGAAGCCGTG
GGACAGTACCGACAGGGACTTTGTGAAGTACGAGTTTTTCCAGGCGATGT
CGGCGGTGGGCGGGCTGCTGCAGGAGGCGGTGGTGGGGCCGGGCAGGGCC
TCACTGGACGAACGGAAGAAGGACGAATAAATGGCAACACACTCAGTGTT
CCGGTTCTTGAAGAGGAATCTGCCCGTCATCGCCCGTCTGCTGCTCATGA
TGACGTTTTTCGATGACGGCCTGCGGATGATCTACAACTGGACCAACCAG
ACGCGGTACTTCCAGCACTCCTGGAAGATCAGCGCCTCTGTAGCCGGCAT
CGCCGTGTCCCTGAACATGGCCGGGCAGCTGGCGGGCTGCGTGCTGGTCC
TGGCCAGGAGGAAGGTCGAGTGGGGGTGTGGCATCCTGTTTGCCAACGTC
ATCTTCCAGGCAGTCATGTATGAATATTTTAAGTACGCCAAATATATTCT
GAGAAGTCTGTCCCTAACCGGCTGTGTGCTGCTGCTGCTGTTGGACCACT
GGGCCGAGCGGAAGAGCATGGATCCCGGACTTCTCAAGGTCAAGAAGGAG
GACAGGACCCGGATGTTGCTCCAACTAGCAGGCCGTTGTCTGGTAGGTTT
CATGTTCGTGTCGCTGGCTCAGCTCGGTCCCAGCTATCCCGTCCTGTTCA
TCACCATGGCGGGGTACGTGCTGCTCGTCTGCGTTATAGTCGGCTTCAGG
ACCAGGCAATGTGCCATCATTCTGGCCCTGCAGTTTTTCCTGGTGACTCT
GTTTACGCGGACCTGGTGGCTGAAGCCGTGGGACAGTACCGACAGGGACT
TTGTGAAGTACGAGTTTTTCCAGGCGATGTCGGCGGTGGGCGGGCTGCTG
CAGGAGGCGGTGGTGGGGCCGGGCAGGGCCTCACTGGACGAACGGAAGAA
GGACGAATAAATGGCAACACACTCAGTGTTCCGGTTCTTGAAGAGGAATC
TGCCCGTCATCGCCCGTCTGCTGCTCATGATGACGTTTTTCGATGACGGC
CTGCGGATGATCTACAACTGGACCAACCAGACGCGGTACTTCCAGCACTC
CTGGAAGATCAGCGCCTCTGTAGCCGGCATCGCCGTGTCCCTGAACATGG
CCGGGCAGCTGGCGGGCTGCGTGCTGGTCCTGGCCAGGAGGAAGGTCGAG
TGGGGGTGTGGCATCCTGTTTGCCAACGTCATCTTCCAGGCAGTCATGTA
TGAATATTTTAAGTACGCCAAATATATTCTGAGAAGTCTGTCCCTAACCG
GCTGTGTGCTGCTGCTGCTGTTGGACCACTGGGCCGAGCGGAAGAGCATG
GATCCCGGACTTCTCAAGGTCAAGAAGGAGGACAGGACCCGGATGTTGCT
CCAACTAGCAGGCCGTTGTCTGGTAGGTTTCATGTTCGTGTCGCTGGCTC
AGCTCGGTCCCAGCTATCCCGTCCTGTTCATCACCATGGCGGGGTACGTG
CTGCTCGTCTGCGTTATAGTCGGCTTCAGGACCAGGCAATGTGCCATCAT
TCTGGCCCTGCAGTTTTTCCTGGTGACTCTGTTTACGCGGACCTGGTGGC
TGAAGCCGTGGGACAGTACCGACAGGGACTTTGTGAAGTACGAGTTTTTC
CAGGCGATGTCGGCGGTGGGCGGGCTGCTGCAGGAGGCGGTGGTGGGGCC
GGGCAGGGCCTCACTGGACGAACGGAAGAAGGACGAATAAATGGCAACAC
ACTCAGTGTTCCGGTTCTTGAAGAGGAATCTGCCCGTCATCGCCCGTCTG
CTGCTCATGATGACGTTTTTCGATGACGGCCTGCGGATGATCTACAACTG
GACCAACCAGACGCGGTACTTCCAGCACTCCTGGAAGATCAGCGCCTCTG
TAGCCGGCATCGCCGTGTCCCTGAACATGGCCGGGCAGCTGGCGGGCTGC
GTGCTGGTCCTGGCCAGGAGGAAGGTCGAGTGGGGGTGTGGCATCCTGTT
TGCCAACGTCATCTTCCAGGCAGTCATGTATGAATATTTTAAGTACGCCA
AATATATTCTGAGAAGTCTGTCCCTAACCGGCTGTGTGCTGCTGCTGCTG
TTGGACCACTGGGCCGAGCGGAAGAGCATGGATCCCGGACTTCTCAAGGT
CAAGAAGGAGGACAGGACCCGGATGTTGCTCCAACTAGCAGGCCGTTGTC
TGGTAGGTTTCATGTTCGTGTCGCTGGCTCAGCTCGGTCCCAGCTATCCC
GTCCTGTTCATCACCATGGCGGGGTACGTGCTGCTCGTCTGCGTTATAGT
CGGCTTCAGGACCAGGCAATGTGCCATCATTCTGGCCCTGCAGTTTTTCC
TGGTGACTCTGTTTACGCGGACCTGGTGGCTGAAGCCGTGGGACAGTACC
GACAGGGACTTTGTGAAGTACGAGTTTTTCCAGGCGATGTCGGCGGTGGG
CGGGCTGCTGCAGGAGGCGGTGGTGGGGCCGGGCAGGGCCTCACTGGACG
AACGGAAGAAGGACGAATAAATGGCAACACACTCAGTGTTCCGGTTCTTG
AAGAGGAATCTGCCCGTCATCGCCCGTCTGCTGCTCATGATGACGTTTTT
CGATGACGGCCTGCGGATGATCTACAACTGGACCAACCAGACGCGGTACT
TCCAGCACTCCTGGAAGATCAGCGCCTCTGTAGCCGGCATCGCCGTGTCC
CTGAACATGGCCGGGCAGCTGGCGGGCTGCGTGCTGGTCCTGGCCAGGAG
GAAGGTCGAGTGGGGGTGTGGCATCCTGTTTGCCAACGTCATCTTCCAGG
CAGTCATGTATGAATATTTTAAGTACGCCAAATATATTCTGAGAAGTCTG
TCCCTAACCGGCTGTGTGCTGCTGCTGCTGTTGGACCACTGGGCCGAGCG
GAAGAGCATGGATCCCGGACTTCTCAAGGTCAAGAAGGAGGACAGGACCC
GGATGTTGCTCCAACTAGCAGGCCGTTGTCTGGTAGGTTTCATGTTCGTG
TCGCTGGCTCAGCTCGGTCCCAGCTATCCCGTCCTGTTCATCACCATGGC
GGGGTACGTGCTGCTCGTCTGCGTTATAGTCGGCTTCAGGACCAGGCAAT
GTGCCATCATTCTGGCCCTGCAGTTTTTCCTGGTGACTCTGTTTACGCGG
ACCTGGTGGCTGAAGCCGTGGGACAGTACCGACAGGGACTTTGTGAAGTA
CGAGTTTTTCCAGGCGATGTCGGCGGTGGGCGGGCTGCTGCAGGAGGCGG
TGGTGGGGCCGGGCAGGGCCTCACTGGACGAACGGAAGAAGGACGAATAA
ATGGCAACACACTCAGTGTTCCGGTTCTTGAAGAGGAATCTGCCCGTCAT
CGCCCGTCTGCTGCTCATGATGACGTTTTTCGATGACGGCCTGCGGATGA
TCTACAACTGGACCAACCAGACGCGGTACTTCCAGCACTCCTGGAAGATC
AGCGCCTCTGTAGCCGGCATCGCCGTGTCCCTGAACATGGCCGGGCAGCT
GGCGGGCTGCGTGCTGGTCCTGGCCAGGAGGAAGGTCGAGTGGGGGTGTG
GCATCCTGTTTGCCAACGTCATCTTCCAGGCAGTCATGTATGAATATTTT
AAGTACGCCAAATATATTCTGAGAAGTCTGTCCCTAACCGGCTGTGTGCT
GCTGCTGCTGTTGGACCACTGGGCCGAGCGGAAGAGCATGGATCCCGGAC
TTCTCAAGGTCAAGAAGGAGGACAGGACCCGGATGTTGCTCCAACTAGCA
GGCCGTTGTCTGGTAGGTTTCATGTTCGTGTCGCTGGCTCAGCTCGGTCC
CAGCTATCCCGTCCTGTTCATCACCATGGCGGGGTACGTGCTGCTCGTCT
GCGTTATAGTCGGCTTCAGGACCAGGCAATGTGCCATCATTCTGGCCCTG
CAGTTTTTCCTGGTGACTCTGTTTACGCGGACCTGGTGGCTGAAGCCGTG
GGACAGTACCGACAGGGACTTTGTGAAGTACGAGTTTTTCCAGGCGATGT
CGGCGGTGGGCGGGCTGCTGCAGGAGGCGGTGGTGGGGCCGGGCAGGGCC
TCACTGGACGAACGGAAGAAGGACGAATAAATGGCAACACACTCAGTGTT
CCGGTTCTTGAAGAGGAATCTGCCCGTCATCGCCCGTCTGCTGCTCATGA
TGACGTTTTTCGATGACGGCCTGCGGATGATCTACAACTGGACCAACCAG
ACGCGGTACTTCCAGCACTCCTGGAAGATCAGCGCCTCTGTAGCCGGCAT
CGCCGTGTCCCTGAACATGGCCGGGCAGCTGGCGGGCTGCGTGCTGGTCC
TGGCCAGGAGGAAGGTCGAGTGGGGGTGTGGCATCCTGTTTGCCAACGTC
ATCTTCCAGGCAGTCATGTATGAATATTTTAAGTACGCCAAATATATTCT
GAGAAGTCTGTCCCTAACCGGCTGTGTGCTGCTGCTGCTGTTGGACCACT
GGGCCGAGCGGAAGAGCATGGATCCCGGACTTCTCAAGGTCAAGAAGGAG
GACAGGACCCGGATGTTGCTCCAACTAGCAGGCCGTTGTCTGGTAGGTTT
CATGTTCGTGTCGCTGGCTCAGCTCGGTCCCAGCTATCCCGTCCTGTTCA
TCACCATGGCGGGGTACGTGCTGCTCGTCTGCGTTATAGTCGGCTTCAGG
ACCAGGCAATGTGCCATCATTCTGGCCCTGCAGTTTTTCCTGGTGACTCT
GTTTACGCGGACCTGGTGGCTGAAGCCGTGGGACAGTACCGACAGGGACT
TTGTGAAGTACGAGTTTTTCCAGGCGATGTCGGCGGTGGGCGGGCTGCTG
CAGGAGGCGGTGGTGGGGCCGGGCAGGGCCTCACTGGACGAACGGAAGAA
GGACGAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000198 | genome | Sc0000198:333752..336544 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95894_evm0 |
| Biotype | protein_coding |
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