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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96032_evm1 >transcript:BL96032_evm1-protein ID=transcript:BL96032_evm1-protein|Name=transcript:BL96032_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=391bp
MADLFKPRGMFGMFKLLSLASLFIIVILARWIGNRTPVRYAKTLSQDDDT
TTVNPAGRSFIEQIKSVVSPVVQAVMGFASGQVKSGPVAVSLNQTLDVVL
WRSKKKGEIPYYRIPVLTYTPNGNLVAIAEGRRKSQKDENPKIFLVKRST
DGGETWPPSQRIVDDGNKGFKISSYIGTIFVDDITATIFLMYVYCEFCPT
RSLMLINSTDDGITWGRPRNITDHVGKDYATHPSPGYGIQKKQEPAKGRL
VVCGHGFYNGKGLVLLLSDDHGVTWRPGAVVPSEPFEMKLEKGVFDPDEC
QPVELPDGSIYIVVRNEKVYKYHCKMTMRSFDGGETLPQNYTYLDQALVE
PRISSGLWYHDGXVEPRISSGMWYHDGTLFYSGVKHDKQQS Run BLAST on NCBI mRNA from alignment at Sc0000327:261842..264859- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96032_evm1 ID=transcript:BL96032_evm1|Name=transcript:BL96032_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3018bp|location=Sequence derived from alignment at Sc0000327:261842..264859- (Branchiostoma lanceolatum)
ATGGCTGACCTCTTCAAACCGCGAGGCATGTTTGGGATGTTCAAGCTGCT
GAGTCTTGCTTCCCTCTTCATCATTGTCATCCTGGCACGGTGGATAGGAA
ACAGAACACCCGTCCGATATGCAAAGGTAACGTTCTCAGTATCTCTCTAC
TGACTTTGTAGACAACTGTCTTATCTGAACAAGCAACAGTAAACATGATA
ACTCAACATCGCTTAAGTCCATAGCAGAACTAGCTAAACCTGAACCCACT
ACTCAAAGACAAACCGTCCAGCAATATAGAGACAGAAAAGAAACTTTAAC
ATGTAGTTCTTACCTCCGTGAGCATTCACTAGACATGAAAATGGCAAATA
TTACAGTATCACCCAGTAGATAGCTGTGTGGTTATTTCTAACTATAGAAA
GATATCAACGATATACGTGTTTTACCCATCTTCACGTCACTTACTAAGGC
AATCAACAGATACGCTAGTTACAAGCGAATCTTACATTTTTACCAAATCA
TTTCCATAACTAATTGATTTAAAAAATTATCTCATTTTTCATTAATGAAG
AACTTAAGCAATTTTATATCAATAGCAGAAATGTGATATATCTACTTAAA
AGAGGACTGTCGTTCATTTGCTTCAATGATTATTTCAAAGACTTGCTGTT
CTTCGATATAGATAGACAATATAAAATCTTTTGCATTTGCTGTTTTTGGA
AAGTGGTGACAAGAAATACACCTAAACCGACAATGTTCACGTTTACTTAC
AATCATTCTTCAACAGACCCTTTCTCAGGATGATGACACTACCACAGTGA
ATCCAGCAGGCCGTTCCTTCATCGAGCAGATCAAGTCAGTGGTCAGCCCT
GTCGTCCAGGCAGTTATGGGCTTCGCTTCCGGGCAAGTCAAGTCAGGCCC
TGTTGCTGTCTCCCTGAATCAGACCCTGGACGTTGTGCTGTGGAGGAGCA
AAAAGAAGGGAGAAATCCCATATTACCGGATTCCTGTTCTCACCTACACT
CCCAATGGAAATCTGGTAGCCATAGCAGAAGGGAGAAGGAAGTCACAAAA
AGACGAAAATCCAAAGATCTTTCTTGTGAAAAGATCAACGGATGGAGGTA
TGGCTGTATGCTCATTTATTCTTTTGGTGGCAGTGCTTTGCTTAATGTCT
ATCATACGAGTATATTGTTGGCAATGGTGCACAGAATTTGCATGAATGTT
AAGCAATCTACTGGCAACCCGTATACTGTTATGCTCCTTATGAGGAGCAT
AAATGCTTAAATGCATAAATACTTAAATGTATAAATGCACCTTATGAGGA
CACATAGCATGGTTATTTTTTTTCTGCCTAACTAACAGTATCTTTCATTT
GAAGGTGAAACGTGGCCGCCGTCACAGCGGATAGTGGACGACGGCAATAA
AGGTTTCAAGATCAGCTCCTACATAGGCACTATCTTTGTTGACGATATAA
CGGCAACCATCTTCCTGATGTACGTGTATTGTGAGTTCTGTCCTACCAGA
TCACTGATGTTGATAAACAGTACGGATGACGGCATCACGTGGGGCCGGCC
GAGAAATATCACCGACCACGTAGGAAAAGACTACGCCACACACCCAAGTC
CAGGATACGGCATTCAGGTTAGGGGCGTTGACTATCCTGCTTTATACTTG
CTAAAATAAAGCTTTCATCACATTTCCATAGCAAACGCAAATAGATTTAT
TATACAAAATAAGATATAGCTTTACATGCTTTATTTGTACATTGTGTACT
TAGATATTCAGTAGTAATTTGTCGAGATCAATGGTGCTTACAGGGCCAAC
GTTTGTCTGTAGTTTCTCCATGATATCCAAGCAGATCTATCGGTGGCAAT
GACAGTATCCAAACGACGAAAACGCCATTAAGGCCAATAATGCAACTTTC
GCCCTTTGGATACTGTCATTGCCACCGATAGATCTGCTTGGATATTACGG
AGAAACTACAGACAAACGTTGGCCCTGTAAGCACCATTTCCGTTCGTTTA
ATCCATTCTTGAAAAGGAAACATATGTACATGCATGTTTTACTATCTGTC
CTGTGTATTGGCGTGATTTCTATGGGATTTTCATCTGATTGTTTCGATGC
AACTGTCGAATAAATATGTTAGTATTTTCAAAATCAATCTCCGGCCATTT
CTCTACCATTCTTTTCAGAAAAAGCAGGAGCCAGCTAAAGGAAGACTTGT
TGTGTGCGGACACGGTTTCTACAATGGGAAAGGCCTGGTGCTGCTGCTGA
GTGATGACCACGGCGTGACATGGAGACCTGGAGCCGTCGTACCGAGTGAG
CCGTTCGAGATGAAGTTGGAAAAGGGCGTTTTTGACCCCGATGAATGCCA
GGTGAGCTAACAGAAAAGGGACTGAAGAGCTAAAAATGTAACAGTCTGAC
TCTCATTCCGTAATTTTTCCTGAAATAAATGGCATGGGGAATGGGATGGA
CTATTAATAAGATAACACATTTTAGTTTTGATGACACAATTCACAACATT
CACAATATTTCCCTTCGAGCAATTTCCAAGCACACCATGTACCATCTTTG
ACCTTTGCTGCTATGTTGTTTTATACTATCTACAGCCGGTGGAGTTGCCC
GATGGCTCCATATATATAGTCGTCAGGAATGAAAAGGTATACAAATACCA
CTGCAAGATGACCATGCGTAGCTTTGATGGGGGAGAAACGCTGCCACAAA
ACTACACGTACTTGGACCAGGCACTCGTGGAACCGAGAATCTCATCGGGG
CTGTGGTACCACGATGGGNTCGTGGAACCGAGAATCTCATCGGGGATGTG
GTACCACGATGGGACCTTGTTCTACTCAGGAGTGAAACATGACAAACAAC
GTGGGTACAGAACATTGTTTTACAGTATTTGAGTAAACAATAGTGTAAAC
ATTAATAGTCGATTGTGAACATTAATATTATAACCATATTTGTTACATAC
ACAACAGTAGGGCAAGCTAGCTAGTGTTGAAGCTATGGTACATTTTCATT
GTGTCTACAGAGTCATGA Coding sequence (CDS) from alignment at Sc0000327:261842..264859- >transcript:BL96032_evm1 ID=transcript:BL96032_evm1|Name=transcript:BL96032_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=7056bp|location=Sequence derived from alignment at Sc0000327:261842..264859- (Branchiostoma lanceolatum)
ATGGCTGACCTCTTCAAACCGCGAGGCATGTTTGGGATGTTCAAGCTGCT
GAGTCTTGCTTCCCTCTTCATCATTGTCATCCTGGCACGGTGGATAGGAA
ACAGAACACCCGTCCGATATGCAAAGACCCTTTCTCAGGATGATGACACT
ACCACAGTGAATCCAGCAGGCCGTTCCTTCATCGAGCAGATCAAGTCAGT
GGTCAGCCCTGTCGTCCAGGCAGTTATGGGCTTCGCTTCCGGGCAAGTCA
AGTCAGGCCCTGTTGCTGTCTCCCTGAATCAGACCCTGGACGTTGTGCTG
TGGAGGAGCAAAAAGAAGGGAGAAATCCCATATTACCGGATTCCTGTTCT
CACCTACACTCCCAATGGAAATCTGGTAGCCATAGCAGAAGGGAGAAGGA
AGTCACAAAAAGACGAAAATCCAAAGATCTTTCTTGTGAAAAGATCAACG
GATGGAGGTGAAACGTGGCCGCCGTCACAGCGGATAGTGGACGACGGCAA
TAAAGGTTTCAAGATCAGCTCCTACATAGGCACTATCTTTGTTGACGATA
TAACGGCAACCATCTTCCTGATGTACGTGTATTGTGAGTTCTGTCCTACC
AGATCACTGATGTTGATAAACAGTACGGATGACGGCATCACGTGGGGCCG
GCCGAGAAATATCACCGACCACGTAGGAAAAGACTACGCCACACACCCAA
GTCCAGGATACGGCATTCAGAAAAAGCAGGAGCCAGCTAAAGGAAGACTT
GTTGTGTGCGGACACGGTTTCTACAATGGGAAAGGCCTGGTGCTGCTGCT
GAGTGATGACCACGGCGTGACATGGAGACCTGGAGCCGTCGTACCGAGTG
AGCCGTTCGAGATGAAGTTGGAAAAGGGCGTTTTTGACCCCGATGAATGC
CAGCCGGTGGAGTTGCCCGATGGCTCCATATATATAGTCGTCAGGAATGA
AAAGGTATACAAATACCACTGCAAGATGACCATGCGTAGCTTTGATGGGG
GAGAAACGCTGCCACAAAACTACACGTACTTGGACCAGGCACTCGTGGAA
CCGAGAATCTCATCGGGGCTGTGGTACCACGATGGGNTCGTGGAACCGAG
AATCTCATCGGGGATGTGGTACCACGATGGGACCTTGTTCTACTCAGGAG
TGAAACATGACAAACAACAGTCATGAATGGCTGACCTCTTCAAACCGCGA
GGCATGTTTGGGATGTTCAAGCTGCTGAGTCTTGCTTCCCTCTTCATCAT
TGTCATCCTGGCACGGTGGATAGGAAACAGAACACCCGTCCGATATGCAA
AGACCCTTTCTCAGGATGATGACACTACCACAGTGAATCCAGCAGGCCGT
TCCTTCATCGAGCAGATCAAGTCAGTGGTCAGCCCTGTCGTCCAGGCAGT
TATGGGCTTCGCTTCCGGGCAAGTCAAGTCAGGCCCTGTTGCTGTCTCCC
TGAATCAGACCCTGGACGTTGTGCTGTGGAGGAGCAAAAAGAAGGGAGAA
ATCCCATATTACCGGATTCCTGTTCTCACCTACACTCCCAATGGAAATCT
GGTAGCCATAGCAGAAGGGAGAAGGAAGTCACAAAAAGACGAAAATCCAA
AGATCTTTCTTGTGAAAAGATCAACGGATGGAGGTGAAACGTGGCCGCCG
TCACAGCGGATAGTGGACGACGGCAATAAAGGTTTCAAGATCAGCTCCTA
CATAGGCACTATCTTTGTTGACGATATAACGGCAACCATCTTCCTGATGT
ACGTGTATTGTGAGTTCTGTCCTACCAGATCACTGATGTTGATAAACAGT
ACGGATGACGGCATCACGTGGGGCCGGCCGAGAAATATCACCGACCACGT
AGGAAAAGACTACGCCACACACCCAAGTCCAGGATACGGCATTCAGAAAA
AGCAGGAGCCAGCTAAAGGAAGACTTGTTGTGTGCGGACACGGTTTCTAC
AATGGGAAAGGCCTGGTGCTGCTGCTGAGTGATGACCACGGCGTGACATG
GAGACCTGGAGCCGTCGTACCGAGTGAGCCGTTCGAGATGAAGTTGGAAA
AGGGCGTTTTTGACCCCGATGAATGCCAGCCGGTGGAGTTGCCCGATGGC
TCCATATATATAGTCGTCAGGAATGAAAAGGTATACAAATACCACTGCAA
GATGACCATGCGTAGCTTTGATGGGGGAGAAACGCTGCCACAAAACTACA
CGTACTTGGACCAGGCACTCGTGGAACCGAGAATCTCATCGGGGCTGTGG
TACCACGATGGGNTCGTGGAACCGAGAATCTCATCGGGGATGTGGTACCA
CGATGGGACCTTGTTCTACTCAGGAGTGAAACATGACAAACAACAGTCAT
GAATGGCTGACCTCTTCAAACCGCGAGGCATGTTTGGGATGTTCAAGCTG
CTGAGTCTTGCTTCCCTCTTCATCATTGTCATCCTGGCACGGTGGATAGG
AAACAGAACACCCGTCCGATATGCAAAGACCCTTTCTCAGGATGATGACA
CTACCACAGTGAATCCAGCAGGCCGTTCCTTCATCGAGCAGATCAAGTCA
GTGGTCAGCCCTGTCGTCCAGGCAGTTATGGGCTTCGCTTCCGGGCAAGT
CAAGTCAGGCCCTGTTGCTGTCTCCCTGAATCAGACCCTGGACGTTGTGC
TGTGGAGGAGCAAAAAGAAGGGAGAAATCCCATATTACCGGATTCCTGTT
CTCACCTACACTCCCAATGGAAATCTGGTAGCCATAGCAGAAGGGAGAAG
GAAGTCACAAAAAGACGAAAATCCAAAGATCTTTCTTGTGAAAAGATCAA
CGGATGGAGGTGAAACGTGGCCGCCGTCACAGCGGATAGTGGACGACGGC
AATAAAGGTTTCAAGATCAGCTCCTACATAGGCACTATCTTTGTTGACGA
TATAACGGCAACCATCTTCCTGATGTACGTGTATTGTGAGTTCTGTCCTA
CCAGATCACTGATGTTGATAAACAGTACGGATGACGGCATCACGTGGGGC
CGGCCGAGAAATATCACCGACCACGTAGGAAAAGACTACGCCACACACCC
AAGTCCAGGATACGGCATTCAGAAAAAGCAGGAGCCAGCTAAAGGAAGAC
TTGTTGTGTGCGGACACGGTTTCTACAATGGGAAAGGCCTGGTGCTGCTG
CTGAGTGATGACCACGGCGTGACATGGAGACCTGGAGCCGTCGTACCGAG
TGAGCCGTTCGAGATGAAGTTGGAAAAGGGCGTTTTTGACCCCGATGAAT
GCCAGCCGGTGGAGTTGCCCGATGGCTCCATATATATAGTCGTCAGGAAT
GAAAAGGTATACAAATACCACTGCAAGATGACCATGCGTAGCTTTGATGG
GGGAGAAACGCTGCCACAAAACTACACGTACTTGGACCAGGCACTCGTGG
AACCGAGAATCTCATCGGGGCTGTGGTACCACGATGGGNTCGTGGAACCG
AGAATCTCATCGGGGATGTGGTACCACGATGGGACCTTGTTCTACTCAGG
AGTGAAACATGACAAACAACAGTCATGAATGGCTGACCTCTTCAAACCGC
GAGGCATGTTTGGGATGTTCAAGCTGCTGAGTCTTGCTTCCCTCTTCATC
ATTGTCATCCTGGCACGGTGGATAGGAAACAGAACACCCGTCCGATATGC
AAAGACCCTTTCTCAGGATGATGACACTACCACAGTGAATCCAGCAGGCC
GTTCCTTCATCGAGCAGATCAAGTCAGTGGTCAGCCCTGTCGTCCAGGCA
GTTATGGGCTTCGCTTCCGGGCAAGTCAAGTCAGGCCCTGTTGCTGTCTC
CCTGAATCAGACCCTGGACGTTGTGCTGTGGAGGAGCAAAAAGAAGGGAG
AAATCCCATATTACCGGATTCCTGTTCTCACCTACACTCCCAATGGAAAT
CTGGTAGCCATAGCAGAAGGGAGAAGGAAGTCACAAAAAGACGAAAATCC
AAAGATCTTTCTTGTGAAAAGATCAACGGATGGAGGTGAAACGTGGCCGC
CGTCACAGCGGATAGTGGACGACGGCAATAAAGGTTTCAAGATCAGCTCC
TACATAGGCACTATCTTTGTTGACGATATAACGGCAACCATCTTCCTGAT
GTACGTGTATTGTGAGTTCTGTCCTACCAGATCACTGATGTTGATAAACA
GTACGGATGACGGCATCACGTGGGGCCGGCCGAGAAATATCACCGACCAC
GTAGGAAAAGACTACGCCACACACCCAAGTCCAGGATACGGCATTCAGAA
AAAGCAGGAGCCAGCTAAAGGAAGACTTGTTGTGTGCGGACACGGTTTCT
ACAATGGGAAAGGCCTGGTGCTGCTGCTGAGTGATGACCACGGCGTGACA
TGGAGACCTGGAGCCGTCGTACCGAGTGAGCCGTTCGAGATGAAGTTGGA
AAAGGGCGTTTTTGACCCCGATGAATGCCAGCCGGTGGAGTTGCCCGATG
GCTCCATATATATAGTCGTCAGGAATGAAAAGGTATACAAATACCACTGC
AAGATGACCATGCGTAGCTTTGATGGGGGAGAAACGCTGCCACAAAACTA
CACGTACTTGGACCAGGCACTCGTGGAACCGAGAATCTCATCGGGGCTGT
GGTACCACGATGGGNTCGTGGAACCGAGAATCTCATCGGGGATGTGGTAC
CACGATGGGACCTTGTTCTACTCAGGAGTGAAACATGACAAACAACAGTC
ATGAATGGCTGACCTCTTCAAACCGCGAGGCATGTTTGGGATGTTCAAGC
TGCTGAGTCTTGCTTCCCTCTTCATCATTGTCATCCTGGCACGGTGGATA
GGAAACAGAACACCCGTCCGATATGCAAAGACCCTTTCTCAGGATGATGA
CACTACCACAGTGAATCCAGCAGGCCGTTCCTTCATCGAGCAGATCAAGT
CAGTGGTCAGCCCTGTCGTCCAGGCAGTTATGGGCTTCGCTTCCGGGCAA
GTCAAGTCAGGCCCTGTTGCTGTCTCCCTGAATCAGACCCTGGACGTTGT
GCTGTGGAGGAGCAAAAAGAAGGGAGAAATCCCATATTACCGGATTCCTG
TTCTCACCTACACTCCCAATGGAAATCTGGTAGCCATAGCAGAAGGGAGA
AGGAAGTCACAAAAAGACGAAAATCCAAAGATCTTTCTTGTGAAAAGATC
AACGGATGGAGGTGAAACGTGGCCGCCGTCACAGCGGATAGTGGACGACG
GCAATAAAGGTTTCAAGATCAGCTCCTACATAGGCACTATCTTTGTTGAC
GATATAACGGCAACCATCTTCCTGATGTACGTGTATTGTGAGTTCTGTCC
TACCAGATCACTGATGTTGATAAACAGTACGGATGACGGCATCACGTGGG
GCCGGCCGAGAAATATCACCGACCACGTAGGAAAAGACTACGCCACACAC
CCAAGTCCAGGATACGGCATTCAGAAAAAGCAGGAGCCAGCTAAAGGAAG
ACTTGTTGTGTGCGGACACGGTTTCTACAATGGGAAAGGCCTGGTGCTGC
TGCTGAGTGATGACCACGGCGTGACATGGAGACCTGGAGCCGTCGTACCG
AGTGAGCCGTTCGAGATGAAGTTGGAAAAGGGCGTTTTTGACCCCGATGA
ATGCCAGCCGGTGGAGTTGCCCGATGGCTCCATATATATAGTCGTCAGGA
ATGAAAAGGTATACAAATACCACTGCAAGATGACCATGCGTAGCTTTGAT
GGGGGAGAAACGCTGCCACAAAACTACACGTACTTGGACCAGGCACTCGT
GGAACCGAGAATCTCATCGGGGCTGTGGTACCACGATGGGNTCGTGGAAC
CGAGAATCTCATCGGGGATGTGGTACCACGATGGGACCTTGTTCTACTCA
GGAGTGAAACATGACAAACAACAGTCATGAATGGCTGACCTCTTCAAACC
GCGAGGCATGTTTGGGATGTTCAAGCTGCTGAGTCTTGCTTCCCTCTTCA
TCATTGTCATCCTGGCACGGTGGATAGGAAACAGAACACCCGTCCGATAT
GCAAAGACCCTTTCTCAGGATGATGACACTACCACAGTGAATCCAGCAGG
CCGTTCCTTCATCGAGCAGATCAAGTCAGTGGTCAGCCCTGTCGTCCAGG
CAGTTATGGGCTTCGCTTCCGGGCAAGTCAAGTCAGGCCCTGTTGCTGTC
TCCCTGAATCAGACCCTGGACGTTGTGCTGTGGAGGAGCAAAAAGAAGGG
AGAAATCCCATATTACCGGATTCCTGTTCTCACCTACACTCCCAATGGAA
ATCTGGTAGCCATAGCAGAAGGGAGAAGGAAGTCACAAAAAGACGAAAAT
CCAAAGATCTTTCTTGTGAAAAGATCAACGGATGGAGGTGAAACGTGGCC
GCCGTCACAGCGGATAGTGGACGACGGCAATAAAGGTTTCAAGATCAGCT
CCTACATAGGCACTATCTTTGTTGACGATATAACGGCAACCATCTTCCTG
ATGTACGTGTATTGTGAGTTCTGTCCTACCAGATCACTGATGTTGATAAA
CAGTACGGATGACGGCATCACGTGGGGCCGGCCGAGAAATATCACCGACC
ACGTAGGAAAAGACTACGCCACACACCCAAGTCCAGGATACGGCATTCAG
AAAAAGCAGGAGCCAGCTAAAGGAAGACTTGTTGTGTGCGGACACGGTTT
CTACAATGGGAAAGGCCTGGTGCTGCTGCTGAGTGATGACCACGGCGTGA
CATGGAGACCTGGAGCCGTCGTACCGAGTGAGCCGTTCGAGATGAAGTTG
GAAAAGGGCGTTTTTGACCCCGATGAATGCCAGCCGGTGGAGTTGCCCGA
TGGCTCCATATATATAGTCGTCAGGAATGAAAAGGTATACAAATACCACT
GCAAGATGACCATGCGTAGCTTTGATGGGGGAGAAACGCTGCCACAAAAC
TACACGTACTTGGACCAGGCACTCGTGGAACCGAGAATCTCATCGGGGCT
GTGGTACCACGATGGGNTCGTGGAACCGAGAATCTCATCGGGGATGTGGT
ACCACGATGGGACCTTGTTCTACTCAGGAGTGAAACATGACAAACAACAG
TCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000327 | genome | Sc0000327:261842..264859 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96032_evm1 |
| Biotype | protein_coding |
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