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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96034_evm0 >transcript:BL96034_evm0-protein ID=transcript:BL96034_evm0-protein|Name=transcript:BL96034_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=352bp
MLTRLRFLARVLLLVLLLVTVFVWLLHPVRVLPQLTSRQQVGMPPALSKD
VGLLAPSEVYSVVLWTSHRRGEVGIFRIPVLTYTPRGNLVAMVEGRRNSE
KDDVPKVIAVKRSTNAGQTWSPSQWIVDDGNTTRRYCSNVGTIFVDDMTA
TIFLMYMYCGFCPTRSLMLVNSTDDGITWGRPRNITNLVGKNYVAHPSPG
YGIQKKHDPAKGRLVVCGHGFHDGLGIVLLLSDDHGVTWRHGAFVPSVPF
RRSRKGDFDPDECQPIELPDGSIRVVVRNEHVYKCNCKMIMKSFDGGETL
PKKFMFLDTSLIEPKITSGVWYHNGVLFYSGPNNSNNRECLMAITSRMLI
LQ Run BLAST on NCBI mRNA from alignment at Sc0000327:255741..258071- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96034_evm0 ID=transcript:BL96034_evm0|Name=transcript:BL96034_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2331bp|location=Sequence derived from alignment at Sc0000327:255741..258071- (Branchiostoma lanceolatum)
ATGCTGACCAGACTAAGGTTCCTGGCGCGAGTTTTGCTGCTCGTGCTGCT
CCTTGTGACCGTCTTCGTTTGGCTACTTCATCCCGTTAGAGTTCTCCCAC
AGCTGACGAGCCGACAGCAGGTAAGTGTGTTGACCTCGTTTATATAGCAC
AGCCTCTCTAACTGAATTCCTTGCACATAGACATTCTAAAAAGTCATCCA
CAGGAAAACTTGTCTGTTCCGACACTTTACATACTAGTGATCACTAGTGG
TTTCAAGAAGCGAGAAGAAACAGAACATGCATGGTGTTTAGAAATACGGT
GTAGCATTGTTTATATTCTATGTATGGTTACGATGTGTGCTGTAGTGCGA
GCTGTGACGACCTGTAATTATCTAATTACAACATTTAGTCACGATTAAGG
TCTTTTCTCATTCATACATACATTAACACATACATTCCGATGCCGTATGT
ACTGTTCAATAATGCCCAAGATAGCTGATTCATAATCTCCAAGCAGATCT
ACACCGGTGCAAAAATCGTATAAGCTTGCCAGAGAAGGTAGCTTATACGA
TTTTTGCACCGGTGTAGATCTGCTTGGAGATTACCTTATTCATATCTCTT
TAAAACATGCAACAGTCATACAACGCGTAATCACCGAACCAAGTGACCTG
TATTTACTTTACGATCTGCGGGTAACAATCTATTCACAAATGTACCATGT
CTACAGGTCGGGATGCCTCCAGCTCTAAGCAAAGACGTAGGCCTCCTTGC
TCCAAGTGAGGTGTACAGTGTCGTGCTGTGGACAAGCCACAGACGAGGCG
AAGTCGGTATATTCCGGATACCGGTTCTCACCTACACACCCCGTGGAAAC
CTGGTCGCCATGGTCGAGGGAAGAAGAAACTCAGAAAAAGATGACGTCCC
CAAAGTGATTGCTGTGAAGAGATCAACTAATGCCGGTAAAAAAATACTTA
CGAATATGAATTCCAACTGTGCAAAGATGATGAAAAAGACTTAAAAACAC
AATACAAATTGGCGAGGTATTAGTACAAATAACCTTCGGTATATACCGTT
ACCAAGTAGGTCTAAAACCCACTACCCTCCCACGTTACTGATGTATTCAA
ATTCACAGGACACCCAGTGTTACACGCTTATCATGTCTATCAAAGCCTCT
TCCATGTCCAATTGTGATGGTGTTGATTGCCTCCAAGATTCAATTCACTC
TGTCAACGGTCTCATAAATACTAATATGATTGAAACTGATGACTGTGAAT
TCATTTGTTTCCAACAGGTCAAACGTGGTCTCCCTCACAGTGGATTGTGG
ACGATGGAAACACGACTCGTCGATACTGCTCAAACGTAGGAACAATTTTC
GTTGACGACATGACAGCAACTATCTTCCTGATGTACATGTATTGCGGCTT
CTGCCCAACGAGATCACTGATGTTGGTAAACAGTACGGATGACGGCATCA
CGTGGGGCCGGCCGAGAAATATAACTAACTTAGTTGGGAAAAATTATGTT
GCACATCCAAGCCCAGGATACGGCATTCAGGTAAGTGCTTTTGTCACATC
GATTATAGAGTAACTGAACCAGGAACTAACAAATACATTTGACGCTGGAA
GAAAGATTTAAGTTCCTTTGATTTGGATCTTTTCTTAGAAAAAGCATGAC
CCAGCCAAAGGAAGACTGGTTGTGTGCGGACACGGTTTCCATGACGGCCT
AGGAATTGTGCTGCTGCTGAGTGATGACCACGGCGTGACGTGGAGACATG
GGGCCTTCGTACCGAGCGTGCCGTTCCGTCGGTCCAGGAAGGGAGACTTC
GATCCAGACGAGTGCCAGGTATGAAAAGACGACGGAATATGAGTAGGAAA
ATAGCCTTTCTATTCAAGTCCAGGATACAGCCTGGTCTGTGTATTGTGAG
AAGTATCATGTTCTTTAAGCCTATTGGCAATACAAAGTACCAAGTACAAC
TGCTTCAAGCTTGCTCTTTGCATACAGTAATAATCTGCATACAATAATCA
GAACGTTCAACAACTTTGTGTAGAATAGTTTGATTTTAACATACATGTAT
CTTACTCTGTTCAGCCCATTGAACTCCCGGATGGAAGCATTCGCGTCGTG
GTGCGAAACGAACATGTCTACAAGTGCAACTGTAAAATGATAATGAAAAG
CTTTGACGGGGGAGAGACCCTGCCAAAGAAGTTCATGTTCCTGGACACAT
CCCTCATCGAGCCAAAAATCACATCTGGGGTATGGTACCACAACGGCGTT
CTGTTCTACTCAGGACCAAACAATTCCAACAATCGTGAGTGTCTTATGGC
TATCACTTCTAGAATGCTGATCCTACAGTAG Coding sequence (CDS) from alignment at Sc0000327:255741..258071- >transcript:BL96034_evm0 ID=transcript:BL96034_evm0|Name=transcript:BL96034_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=5295bp|location=Sequence derived from alignment at Sc0000327:255741..258071- (Branchiostoma lanceolatum)
ATGCTGACCAGACTAAGGTTCCTGGCGCGAGTTTTGCTGCTCGTGCTGCT
CCTTGTGACCGTCTTCGTTTGGCTACTTCATCCCGTTAGAGTTCTCCCAC
AGCTGACGAGCCGACAGCAGGTCGGGATGCCTCCAGCTCTAAGCAAAGAC
GTAGGCCTCCTTGCTCCAAGTGAGGTGTACAGTGTCGTGCTGTGGACAAG
CCACAGACGAGGCGAAGTCGGTATATTCCGGATACCGGTTCTCACCTACA
CACCCCGTGGAAACCTGGTCGCCATGGTCGAGGGAAGAAGAAACTCAGAA
AAAGATGACGTCCCCAAAGTGATTGCTGTGAAGAGATCAACTAATGCCGG
TCAAACGTGGTCTCCCTCACAGTGGATTGTGGACGATGGAAACACGACTC
GTCGATACTGCTCAAACGTAGGAACAATTTTCGTTGACGACATGACAGCA
ACTATCTTCCTGATGTACATGTATTGCGGCTTCTGCCCAACGAGATCACT
GATGTTGGTAAACAGTACGGATGACGGCATCACGTGGGGCCGGCCGAGAA
ATATAACTAACTTAGTTGGGAAAAATTATGTTGCACATCCAAGCCCAGGA
TACGGCATTCAGAAAAAGCATGACCCAGCCAAAGGAAGACTGGTTGTGTG
CGGACACGGTTTCCATGACGGCCTAGGAATTGTGCTGCTGCTGAGTGATG
ACCACGGCGTGACGTGGAGACATGGGGCCTTCGTACCGAGCGTGCCGTTC
CGTCGGTCCAGGAAGGGAGACTTCGATCCAGACGAGTGCCAGCCCATTGA
ACTCCCGGATGGAAGCATTCGCGTCGTGGTGCGAAACGAACATGTCTACA
AGTGCAACTGTAAAATGATAATGAAAAGCTTTGACGGGGGAGAGACCCTG
CCAAAGAAGTTCATGTTCCTGGACACATCCCTCATCGAGCCAAAAATCAC
ATCTGGGGTATGGTACCACAACGGCGTTCTGTTCTACTCAGGACCAAACA
ATTCCAACAATCGTGAGTGTCTTATGGCTATCACTTCTAGAATGCTGATC
CTACAGTAGATGCTGACCAGACTAAGGTTCCTGGCGCGAGTTTTGCTGCT
CGTGCTGCTCCTTGTGACCGTCTTCGTTTGGCTACTTCATCCCGTTAGAG
TTCTCCCACAGCTGACGAGCCGACAGCAGGTCGGGATGCCTCCAGCTCTA
AGCAAAGACGTAGGCCTCCTTGCTCCAAGTGAGGTGTACAGTGTCGTGCT
GTGGACAAGCCACAGACGAGGCGAAGTCGGTATATTCCGGATACCGGTTC
TCACCTACACACCCCGTGGAAACCTGGTCGCCATGGTCGAGGGAAGAAGA
AACTCAGAAAAAGATGACGTCCCCAAAGTGATTGCTGTGAAGAGATCAAC
TAATGCCGGTCAAACGTGGTCTCCCTCACAGTGGATTGTGGACGATGGAA
ACACGACTCGTCGATACTGCTCAAACGTAGGAACAATTTTCGTTGACGAC
ATGACAGCAACTATCTTCCTGATGTACATGTATTGCGGCTTCTGCCCAAC
GAGATCACTGATGTTGGTAAACAGTACGGATGACGGCATCACGTGGGGCC
GGCCGAGAAATATAACTAACTTAGTTGGGAAAAATTATGTTGCACATCCA
AGCCCAGGATACGGCATTCAGAAAAAGCATGACCCAGCCAAAGGAAGACT
GGTTGTGTGCGGACACGGTTTCCATGACGGCCTAGGAATTGTGCTGCTGC
TGAGTGATGACCACGGCGTGACGTGGAGACATGGGGCCTTCGTACCGAGC
GTGCCGTTCCGTCGGTCCAGGAAGGGAGACTTCGATCCAGACGAGTGCCA
GCCCATTGAACTCCCGGATGGAAGCATTCGCGTCGTGGTGCGAAACGAAC
ATGTCTACAAGTGCAACTGTAAAATGATAATGAAAAGCTTTGACGGGGGA
GAGACCCTGCCAAAGAAGTTCATGTTCCTGGACACATCCCTCATCGAGCC
AAAAATCACATCTGGGGTATGGTACCACAACGGCGTTCTGTTCTACTCAG
GACCAAACAATTCCAACAATCGTGAGTGTCTTATGGCTATCACTTCTAGA
ATGCTGATCCTACAGTAGATGCTGACCAGACTAAGGTTCCTGGCGCGAGT
TTTGCTGCTCGTGCTGCTCCTTGTGACCGTCTTCGTTTGGCTACTTCATC
CCGTTAGAGTTCTCCCACAGCTGACGAGCCGACAGCAGGTCGGGATGCCT
CCAGCTCTAAGCAAAGACGTAGGCCTCCTTGCTCCAAGTGAGGTGTACAG
TGTCGTGCTGTGGACAAGCCACAGACGAGGCGAAGTCGGTATATTCCGGA
TACCGGTTCTCACCTACACACCCCGTGGAAACCTGGTCGCCATGGTCGAG
GGAAGAAGAAACTCAGAAAAAGATGACGTCCCCAAAGTGATTGCTGTGAA
GAGATCAACTAATGCCGGTCAAACGTGGTCTCCCTCACAGTGGATTGTGG
ACGATGGAAACACGACTCGTCGATACTGCTCAAACGTAGGAACAATTTTC
GTTGACGACATGACAGCAACTATCTTCCTGATGTACATGTATTGCGGCTT
CTGCCCAACGAGATCACTGATGTTGGTAAACAGTACGGATGACGGCATCA
CGTGGGGCCGGCCGAGAAATATAACTAACTTAGTTGGGAAAAATTATGTT
GCACATCCAAGCCCAGGATACGGCATTCAGAAAAAGCATGACCCAGCCAA
AGGAAGACTGGTTGTGTGCGGACACGGTTTCCATGACGGCCTAGGAATTG
TGCTGCTGCTGAGTGATGACCACGGCGTGACGTGGAGACATGGGGCCTTC
GTACCGAGCGTGCCGTTCCGTCGGTCCAGGAAGGGAGACTTCGATCCAGA
CGAGTGCCAGCCCATTGAACTCCCGGATGGAAGCATTCGCGTCGTGGTGC
GAAACGAACATGTCTACAAGTGCAACTGTAAAATGATAATGAAAAGCTTT
GACGGGGGAGAGACCCTGCCAAAGAAGTTCATGTTCCTGGACACATCCCT
CATCGAGCCAAAAATCACATCTGGGGTATGGTACCACAACGGCGTTCTGT
TCTACTCAGGACCAAACAATTCCAACAATCGTGAGTGTCTTATGGCTATC
ACTTCTAGAATGCTGATCCTACAGTAGATGCTGACCAGACTAAGGTTCCT
GGCGCGAGTTTTGCTGCTCGTGCTGCTCCTTGTGACCGTCTTCGTTTGGC
TACTTCATCCCGTTAGAGTTCTCCCACAGCTGACGAGCCGACAGCAGGTC
GGGATGCCTCCAGCTCTAAGCAAAGACGTAGGCCTCCTTGCTCCAAGTGA
GGTGTACAGTGTCGTGCTGTGGACAAGCCACAGACGAGGCGAAGTCGGTA
TATTCCGGATACCGGTTCTCACCTACACACCCCGTGGAAACCTGGTCGCC
ATGGTCGAGGGAAGAAGAAACTCAGAAAAAGATGACGTCCCCAAAGTGAT
TGCTGTGAAGAGATCAACTAATGCCGGTCAAACGTGGTCTCCCTCACAGT
GGATTGTGGACGATGGAAACACGACTCGTCGATACTGCTCAAACGTAGGA
ACAATTTTCGTTGACGACATGACAGCAACTATCTTCCTGATGTACATGTA
TTGCGGCTTCTGCCCAACGAGATCACTGATGTTGGTAAACAGTACGGATG
ACGGCATCACGTGGGGCCGGCCGAGAAATATAACTAACTTAGTTGGGAAA
AATTATGTTGCACATCCAAGCCCAGGATACGGCATTCAGAAAAAGCATGA
CCCAGCCAAAGGAAGACTGGTTGTGTGCGGACACGGTTTCCATGACGGCC
TAGGAATTGTGCTGCTGCTGAGTGATGACCACGGCGTGACGTGGAGACAT
GGGGCCTTCGTACCGAGCGTGCCGTTCCGTCGGTCCAGGAAGGGAGACTT
CGATCCAGACGAGTGCCAGCCCATTGAACTCCCGGATGGAAGCATTCGCG
TCGTGGTGCGAAACGAACATGTCTACAAGTGCAACTGTAAAATGATAATG
AAAAGCTTTGACGGGGGAGAGACCCTGCCAAAGAAGTTCATGTTCCTGGA
CACATCCCTCATCGAGCCAAAAATCACATCTGGGGTATGGTACCACAACG
GCGTTCTGTTCTACTCAGGACCAAACAATTCCAACAATCGTGAGTGTCTT
ATGGCTATCACTTCTAGAATGCTGATCCTACAGTAGATGCTGACCAGACT
AAGGTTCCTGGCGCGAGTTTTGCTGCTCGTGCTGCTCCTTGTGACCGTCT
TCGTTTGGCTACTTCATCCCGTTAGAGTTCTCCCACAGCTGACGAGCCGA
CAGCAGGTCGGGATGCCTCCAGCTCTAAGCAAAGACGTAGGCCTCCTTGC
TCCAAGTGAGGTGTACAGTGTCGTGCTGTGGACAAGCCACAGACGAGGCG
AAGTCGGTATATTCCGGATACCGGTTCTCACCTACACACCCCGTGGAAAC
CTGGTCGCCATGGTCGAGGGAAGAAGAAACTCAGAAAAAGATGACGTCCC
CAAAGTGATTGCTGTGAAGAGATCAACTAATGCCGGTCAAACGTGGTCTC
CCTCACAGTGGATTGTGGACGATGGAAACACGACTCGTCGATACTGCTCA
AACGTAGGAACAATTTTCGTTGACGACATGACAGCAACTATCTTCCTGAT
GTACATGTATTGCGGCTTCTGCCCAACGAGATCACTGATGTTGGTAAACA
GTACGGATGACGGCATCACGTGGGGCCGGCCGAGAAATATAACTAACTTA
GTTGGGAAAAATTATGTTGCACATCCAAGCCCAGGATACGGCATTCAGAA
AAAGCATGACCCAGCCAAAGGAAGACTGGTTGTGTGCGGACACGGTTTCC
ATGACGGCCTAGGAATTGTGCTGCTGCTGAGTGATGACCACGGCGTGACG
TGGAGACATGGGGCCTTCGTACCGAGCGTGCCGTTCCGTCGGTCCAGGAA
GGGAGACTTCGATCCAGACGAGTGCCAGCCCATTGAACTCCCGGATGGAA
GCATTCGCGTCGTGGTGCGAAACGAACATGTCTACAAGTGCAACTGTAAA
ATGATAATGAAAAGCTTTGACGGGGGAGAGACCCTGCCAAAGAAGTTCAT
GTTCCTGGACACATCCCTCATCGAGCCAAAAATCACATCTGGGGTATGGT
ACCACAACGGCGTTCTGTTCTACTCAGGACCAAACAATTCCAACAATCGT
GAGTGTCTTATGGCTATCACTTCTAGAATGCTGATCCTACAGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000327 | genome | Sc0000327:255741..258071 - |
Properties
| Property Name | Value |
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| Transcript id | BL96034_evm0 |
| Biotype | protein_coding |
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