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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96037_evm1 >transcript:BL96037_evm1-protein ID=transcript:BL96037_evm1-protein|Name=transcript:BL96037_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=243bp
MDVGPMVKICDINPHVVCILCAGYFIDATTVTECLHTFCKSCIVKYLQTS
KFCPMCNIKIHETQPLLNLRPDRTMQDIVYKVVPGLWENEVQRQKEFYRC
RGMDKTRALGPSATVNREDVDNSKNHYYRHDEQVSMCLERHGTSIVSESE
DEDEIRTYMKPLQHKFIRCSVRAAVVHIKKLIVKKLAVPRRLEVEVLCNG
RVLPKSVTMKYIWLSHWQAKAAPMVLHYRLRPRALTSKSDSSS Run BLAST on NCBI mRNA from alignment at Sc0000329:248849..254112- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96037_evm1 ID=transcript:BL96037_evm1|Name=transcript:BL96037_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=5264bp|location=Sequence derived from alignment at Sc0000329:248849..254112- (Branchiostoma lanceolatum)
ATGGACGTGGGACCGGTAAGGAATAGTTGGAATTGTGTTGCTCAGCTTAG
CTTCATTTTATTTTCGATATTTAGGTTTGAAATTTGTTTTAGAAGAAGGG
GGAGGGGGGCATAATTTGCAGCACTTGTCGTCTGTACCTGCGAATACCTG
TTCAAAGCTGAGCCCATGGACATGATGGATGTTCCATATATTTCATCTTC
CATATATTCTTTGTAGGCAGTTTTTCCACGCTTAAGACTTTAACCGGTCT
GTTCCATCCACCGTTTCTGTTCCTTTTTGAAAGTTTCGGTGGGGAGGGGC
GGGGTAACGTTAACGTTAGCTGGTCAGTGACATGACATTTTGGGACTCTC
TTCCTCATCTCCGGATACGTATTAAGATATTTTATTCCCTTCTACCTCCA
TTTTATAAAACATTAACAGTGTTAAGTCCAACTGCAGCGCTGTGAAAACC
AACATATTCAATAAAAACTGATGTAACATAGTGTTCAACTAAGGAGGTCC
TTGGTTCAACTCACCATTTTACTCACGCTTTTTGAGGACTTTCTATTGTT
CCACGAGTAGGGGAAGAGCTAAAAACGTGAAGCGGTAGAAAGCTATAGAA
AAAAAAAACACACTCAAAAACAAGCATAAAACACTGAGCCAAACTGCTTG
GAGATTGCTGAGGACTAGTACCTTCACTTCTTCATTGTAATGGGGGGAGT
CCAAAGCCTGGTAACGTCCATACTCTGGTAAGGTTTTTAAAATTATTGTT
ACAGAGATATACATGGGTAGCTGTACATGATAAGTACACCTAGATCGAGA
ATAAAGGGTATGCGCATTGGCCTCCCCCCCCCCCCCCCATTAATGATGGA
AATGACACTTCCTTATGACCAGATCATCATGAACCACAAGAGGCGAGTAG
CAGTCTCCTGCCTTCCGGAATCGAACCCGGGCCCGCCAGTGCACAAACTG
TATGTACTATCTGCTAGGCTAAAAGGTCCAGTTAGACTGGTCAGTTGGTG
GCGCTTGAACCCCACTGTTACAATACATTATAGAATTCTGTATATCTTTT
TCTTTATGTTCTTTATACCCTTCAGATGGTGAAGATTTGTGACATCAACC
CCCACGTGGTGTGCATCCTGTGTGCTGGGTACTTCATCGATGCCACCACC
GTCACAGAGTGTCTACACACATGTAAGTTACACTCTTGAGATGTAGTGTT
AACAGACGCTGGGGCAGAAATTTGTAACATAACATATTAGATGGTGTGGA
CAGCTAATGTAATGTGTGATTCGGAGAAAAGTGAAGTACATGTAGTCTGG
ACTTGGAGTACCCACAGTCTCTTGCTTGCTGTTAGGGGCTGATGAGCCCC
CTCCCACTACTATGGGGTCAGGTAGGCTGCTAGGAGCAAATTTTTAGTCA
GGCTAGGCCTTAAACTTCAACAGAAATCTGCTGAAATGTCTCTTTGAAAG
TATATATATGACTGAACTTTTGGTCTTCCTCTTTCCAGTTTGTAAGAGTT
GCATAGTGAAGTATCTCCAGACCAGTAAGTTCTGTCCCATGTGCAATATC
AAGATCCACGAGACACAGCCACTGCTCAACCTGCGGCCCGACAGGACCAT
GCAGGACATCGTCTACAAGGTCGTGCCCGGGCTCTGGGAAAGTCAGTCTG
TTTGTTTGTTTGTTTGTTTTTTGTTTGTTCATTTAAGTGGATGGGATTGA
AAGCATGATTTTGAAAACTATCTTCTTAGAAGATACTTTTTTAATCACTG
GAATAATATGATAATTATATATTAGGCCACAGCAAGTAAATTTTATGAAT
GACATCCTCTGCAGACTCCAAACTTAGTTCGCGTGGGAAAAAAAAGGGGG
GGGCCAAAAAAACAAGATATCCACATTTTCAAACTTGGATATAAGTGTAC
CATAAAGCATGTAAGAATAATTGAAGTGATAAAACATGGTATTACAACGA
ACATGTCACTAACAGTAACTAACTCTGATNATCGATGCCACCACCGTCAC
AGAGTGTCTACACACATGTAAGTTACACTCTTGAGATGTAGTGTTAACAG
ACGCTGGGGCAGAAATTTGTAACATAACATATTAGATGGTGTGGACAGCT
AATGTAATGTGTGATTCGGAGAAAAGTGAAGTACATGTAGTCTGGACTTG
GAGTACCCACAGTCTCTTGCTTGCTGTTAGGGGCTGATGAGCCCCCTCCC
ACTACTATGGGGTCAGGTAGGCTGCTAGGAGCAAATTTTTAGTCAGGCTA
GGCCTTAAACTTCAACAGAAATCTGCTGAAATGTCTCTTTGAAAGTATAT
ATATGACTGAACTTTTGGTCTTCCTCTTTCCAGTTTGTAAGAGTTGCATA
GTGAAGTATCTCCAGACCAGTAAGTTCTGTCCCATGTGCAATATCAAGAT
CCACGAGACACAGCCACTGCTCAACCTGCGGCCCGACAGGACCATGCAGG
ACATCGTCTACAAGGTCGTGCCCGGGCTCTGGGAAAGTCAGTCTGTTTGT
TTGTTTGTTTGTTTTTTGTTTGTTCATTTAAGTGGATGGGATTGAAAGCA
TGATTTTGAAAACTATCTTCTTAGAAGATACTTTTTTAATCACTGGAATA
ATATGATAATTATATATTAGGCCACAGCAAGTAAATTTTATGAATGACAT
CCTCTGCAGACTCCAAACTTAGTTCGCGTGGGAAAAAAAAGGGGGGGGCC
AAAAAAACAAGATATCCACATTTTCAAACTTGGATATAAGTGTACCATAA
AGCATGTAAGAATAATTGAAGTGATAAAACATGGTATTACAACGAACATG
TCACTAACAGTAACTAACTCTGATGTCAACGTTAGAATCATTCTGAATTT
AGATCCGGGTTTGTAAAGATCCGGGTTTTATTCTGTCTTCAACAGACAGA
CAGCTACACAACGGTCTACTCAAACCGCATAACATTAGTTACTTCATCTG
ACCTTGAAATCGATTTTGTCAGTACTTCACTTCATTCAAGAAAAACACAT
CGAATTACACGTTGTTGATAATACTGGCACAGACTAATTCCAATTACAAG
TTTGGTATGAGGGCTGCAATGTGTCCTCCTTTAAGTTGGTGACGAGGAGC
AATCTTATTACAGCTTGCAGACACTAATTGTGCAACACATTTGTATTGAT
ATTTCACCATTCCTACATGTGCAAATGCCTTTTTACAGCATCTAGAACAT
TTTTGCAATGAACCTGACAAACGTTGCAAACACATTGCCCCGTTTTCTGT
ATATTGACCATTGGCAGAGGGTAAAAAAATTCTTGTTTTTTATTTCAAAA
TCAGGCGAAAATCAATGCGTGCGCATCCATAGAATTTACTTGCTGTGGCC
TTATGTTATAAGAGCTTAAGTTAAGGGATGCATCATAAACTCAAGATGGA
TGTGTGTCAGTGTGTGTGTGTACATTTTAGCTTTTAGTCACGTGTCCCTG
TGGCATGAGTGGTAAGCGATCCCACATATGGATCAGGTTCTGTGGGCGGG
GTTAAGCCGTAGCGCAGCTGNTAGCGAAGCTGCATTGCACTACTAGCTAC
TTGCCTCCTGTTTCACCTTAAGAAGAAGTATATACCTGATTGCAAGAAAG
AAGTACCTTCGTAGTAAATTTTGAAATGCTTTCTCTCTTGTTCGTTCTAT
AGATGAGGTACAGAGGCAAAAAGAGTTTTATCGCTGTCGAGGAATGGACA
AAACAAGAGCTCTAGGTAAGAAAGAAACATTCATACAAGCTACTTTTATA
GACTTAACATCAGTCCATTTTTGTGTGTGACAGGAACATCATGTTTGTCA
TGAGTTGTGCAATAAAGACAGCATCAGTGTAGAGCTAAAAAGACATAAGT
GTAGCACCACCAGAGAAATGGAAAGTAACATCACTTTGAGTCTTTGACAT
TTCACCTTCTTTGGGAAACAGATATGCACCAGTTTTGAATATTTATCTAG
CAAAGACAGTACATAAACCTGTGTGTTGTTGAATGTTTCTGATGAGGGTT
TCTTGTGTGATGTAGGTCCATCAGCCACTGTCAACAGAGAGGATGTGGAC
AACTCTAAGAACCACTACTACAGGCACGATGAGCAGGTATCCATGTGCCT
GGAAAGACACGGGTATGTTTCACCTCAATCTTAAATGATTATCTTTTTGT
CTCTCCAATTGTTGGAAAACCTGAACCACTAGCATATATGATGTGTCTTC
ACTTACGTCTTTTTTTTCTGGAGTGAGTGCTTATGTTGAATTGCTCAAAA
CATCAGAACACACAAAATGCATGAAGATTGTAGTTCCTCCCCTATTTCAA
CCTACCAGGTACCGGTAGCAACAATTGTTGAAAATGTATTTTGTGTTGTT
CCTTGATTTCTAGTACCTCCATTGTGTCTGAGTCAGAGGATGAAGATGAG
ATTAGAACTTACATGAAGGTATGTCCAACGTCCCTTTGTAATAATGTTGA
AAAATGAACTGTACATGTGATATTGCTTATGCCTTTATATCACTTATATA
CTCTGTAGTTGTCTGTGTATTTATCCAGTATTTGCTTCTTTTCTAGCCGT
TACAACACAAATTTATTCGCTGCTCTGTGCGAGCGGCTGTTGTACACATC
ANTATATACTCTGTAGTTGTCTGTGTATTTATCCAGTATTTGCTTCTTTT
CTAGCCGTTACAACACAAATTTATTCGCTGCTCTGTGCGGGCGGCTGTTG
TACACATCAAAAAGCTCATAGTCAAGAAACTTGCAGTACCAAGGAGACTG
GAGGTGAGTTGGATATCAGGACATTTTTTCCGCCAAGATGTTACGTCATT
AGACGATTTGCCGTCACCTGTGTGGATGTCATCCATATAATCACAACATG
GCCTAATGTGGAAAAAAATTAGGTTGAACAAAAAATATGAATTTAGCTAC
ATGTATGACCTTCAATAACATGTTGCCTTGTTCCTCTTAACAGGTAGAGG
TGTTATGTAATGGCAGAGTTCTGCCCAAGTCTGTCACCATGAAGTATATC
TGGTTGTCTCACTGGCAAGCCAAGGTAGGCTGGCAGATTCATGGTCTCCA
CTTTCTCATCATTTGTCTGTGCTACTTTCTGAAATCAATCTTCACGCCTC
ATTTTTTTTGGCGATGCCTCGTGGGCAGAGCTGGCAGTACCTTATTCATC
TATATTTGTTACTAATCAAACTGGAATATACGTCTTCTTCAGGCAGCTCC
CATGGTGCTTCATTATCGCCTCAGGCCGAGAGCCTTGACATCCAAGAGTG
ACTCCAGCAGCTAG Coding sequence (CDS) from alignment at Sc0000329:248849..254112- >transcript:BL96037_evm1 ID=transcript:BL96037_evm1|Name=transcript:BL96037_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=732bp|location=Sequence derived from alignment at Sc0000329:248849..254112- (Branchiostoma lanceolatum)
ATGGACGTGGGACCGATGGTGAAGATTTGTGACATCAACCCCCACGTGGT
GTGCATCCTGTGTGCTGGGTACTTCATCGATGCCACCACCGTCACAGAGT
GTCTACACACATTTTGTAAGAGTTGCATAGTGAAGTATCTCCAGACCAGT
AAGTTCTGTCCCATGTGCAATATCAAGATCCACGAGACACAGCCACTGCT
CAACCTGCGGCCCGACAGGACCATGCAGGACATCGTCTACAAGGTCGTGC
CCGGGCTCTGGGAAAATGAGGTACAGAGGCAAAAAGAGTTTTATCGCTGT
CGAGGAATGGACAAAACAAGAGCTCTAGGTCCATCAGCCACTGTCAACAG
AGAGGATGTGGACAACTCTAAGAACCACTACTACAGGCACGATGAGCAGG
TATCCATGTGCCTGGAAAGACACGGTACCTCCATTGTGTCTGAGTCAGAG
GATGAAGATGAGATTAGAACTTACATGAAGCCGTTACAACACAAATTTAT
TCGCTGCTCTGTGCGGGCGGCTGTTGTACACATCAAAAAGCTCATAGTCA
AGAAACTTGCAGTACCAAGGAGACTGGAGGTAGAGGTGTTATGTAATGGC
AGAGTTCTGCCCAAGTCTGTCACCATGAAGTATATCTGGTTGTCTCACTG
GCAAGCCAAGGCAGCTCCCATGGTGCTTCATTATCGCCTCAGGCCGAGAG
CCTTGACATCCAAGAGTGACTCCAGCAGCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000329 | genome | Sc0000329:248849..254112 - |
Properties
| Property Name | Value |
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| Transcript id | BL96037_evm1 |
| Biotype | protein_coding |
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