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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96057_evm1 >transcript:BL96057_evm1-protein ID=transcript:BL96057_evm1-protein|Name=transcript:BL96057_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=386bp
MSSDSLVCLKDFEKYAKEHLNRNSWGFFSAGAEGCQTLRDNEEAFRRLRL
RPRFLRDVSVRDMSATVLGQRVDMPIGISPTANQGLASSQGEIGTAKAAA
QFQTCMICSTYSNFTMEDIMNSSPDGLKWFQLYVRPDRETTAGLVRRAER
AGYKALVLTVDLPIVGRRYPDLRHGFSMPPHLRVANLGNADLSQNKKDRN
EALDYGMGGPDQSSDRALSWKDVAWLRSICSLPIILKGILTAEDARLAVQ
HGVDGILVSNHGGRQLDGVPATIEALPEIVQAAGDKLEVYMDGGVRTGTD
VLKALALGARAVFIGRPAVWGLCYKGQEGVAKVLSILKEELSLAMALSGM
QIVLPEIQIEIQIAISTDRYYDHNRDLFTGRITDSA Run BLAST on NCBI mRNA from alignment at Sc0000359:11115..16369+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96057_evm1 ID=transcript:BL96057_evm1|Name=transcript:BL96057_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=5255bp|location=Sequence derived from alignment at Sc0000359:11115..16369+ (Branchiostoma lanceolatum)
ATGTCGTCTGATTCTCTGGTTTGTTTAAAGGATTTTGAGAAGTACGCGAA
GGAACACCTCAACAGGAACTCATGGGGGTTCTTTTCGGCAGGGGCAGAGG
GGTGTCAGACACTGAGGGATAATGAAGAAGCCTTCAGAAGGTAATTATTG
TTCACATTGACCACTTGCAGTCTCATATGTTCAGGTCTTTAAGTTGAATA
TCTTATTCTAAGTTACACCATTACTAGTAATTATTTGATTATCCTTATCT
ATCGTTATCATATTGCTATATTATTATCAATTATGATTACTTTTGATTAG
TATAGAGGAGGAGGCCAGGGTCTAGCATAAGCTACATACGCTTTTTCCCT
CCTGCTGCACCTGTTTTTATCTATCGTTTATCGTATTATTATTTTCTTGT
TGTGCAAATATATAAACAAACACCTTGTTTAAAGGCTCCGTCTCCGACCA
CGTTTCCTGCGAGACGTGTCGGTACGAGACATGTCCGCTACTGTCCTGGG
ACAGAGAGTAGACATGCCCATCGGAATCAGCCCAACAGCCAACCAAGGCC
TGGCCTCCTCGCAGGGCGAAATTGGTACAGCAAAAGGTACAGTTTGATCT
TGTCAATGTCATTGACGTCAAGGTCCTCATTGGTCAAATTCCTCATCAAC
AAACAGTGGACGAACATGAGGGTGGCTTGATGGGTGGGGATGGCAATTAC
TTACTAGTAATGGTGAACTTAGGAGGGCTGGCAACACTTAACGGTAAATT
TAGGAAGGCCGGCAACATTTAATCATTAATTTGACAAGCATATTTCATAA
CACTCTACGCTAGATTCTGGTATCTCAATAAGCATAGTAGGCTGCATAAA
GGCTGTATACAGGTATTATGCACTATGCTACTAGAATAAAATTTCTGGTA
TCTCAATTGGCATGGTATGGCTGCATACAGCGATACATCCAAGTGATCTG
TTGTGACTCTTTGGCAATATGCCGTTCGACTACGCGATACAAAGAATTTG
TCAATGAAGCTTAACGATGAATCCTGGATAACAGATAACATGCTAGTACG
TTGAATTAAAGCAACCAAGTACGCTTCACGAACAATACACCCACAACGCT
TCACATTGAATTTGAGTGAGGCGGGCTATATGATTAACGGTGAATTTTAC
TAGCTTTCTTCTGCTCACCTTTATAATGATTGAGGATGGCTGTTTTATTT
ACCGCTACTCTGTACCTGTACTAGTATTGAACCAGAAAACTAATCTAAAC
CTCCTTCCAGCTGCAGCCCAGTTCCAGACCTGTATGATATGCAGCACCTA
CTCCAACTTCACAATGGAGGACATCATGAACTCCAGCCCCGACGGTCTCA
AGTGGTTCCAGTTGTACGTGCGTCCCGACAGAGAGACCACCGCGGGACTT
GTCAGGAGAGCTGAGAGGGCGGGGTACAAGGCTCTCGTACTGACCGTGGA
CCTGCCGATCGTAGGGAGAAGGTACCCGGACTTGAGACATGGCTTCTCAA
TGCCTCCGCATCTGAGGGTGGCCAACTTAGGCAATGCTGATCTCAGTCAG
GTGAAGCCTTGACGCCATCCTCCATAGTGACCCCTGGCTCAATCTTTTCG
CTTGCTAACCAGGGTTTCATAATGCTCTACGGTACCCAGGCTAAGATTAG
TCAAGGGTGACAAAACACTAAATACAAGTCCCAATTTGCATAATTTGCAC
TTCATTATGGATTATCTTTGTCTAAGCTATCTGCATACTAAATATCATGG
ATATCCCTCGTTTCTTTGTTCAGTTTCATTCATTCATTTATATTCATTGT
ATTGTTCTAATATGTTTTTACCTAACATCCTTTATCTATAATTACTACAC
TGCCTTTGCTGTACTCTCAGTGCCACAAGTATGACTTTCCTCCCTTCAAC
TTCTCCCACCAACATTGATGAAGGTTAGACAACTAGGTAATAAGATACAC
AAAACATACGCCAAATAATAGTTACTCAAGCAACTGGATATGATTTTGGA
AACTGATGAAAAGTAGTGGATGCTACTTGAAACATCTGACCGTTTCCAAA
ATCATATCCAGCTGCTAGTAAGAGTAACTGTTATTTGGCATATTGTATAT
TACCTTGATGTGAAACCTTCATCGACATACACCAAAAATAGTTAATATTT
ATATAGCAAGTGGATAAATTTTAAAACAGTCAGATGTTTCAGACAGCATT
CGCTATCTTTCGTCACTGACTAAAGGAATTTAGAACTGGGAGAACTAGGT
TTTATACCAAAACTCTGAATAGATACGTTAATGAAGTGAGCAAGTTTTCT
CACCAACACAGAATAAGAAAGACAGAAATGAAGCCCTGGACTACGGCATG
GGAGGTCCTGACCAGTCCTCGGACAGAGCACTGTCCTGGAAGGACGTGGC
CTGGCTGAGGTCCATCTGTAGTCTACCCATCATCCTTAAGGGCATCCTGA
CCGCGGAGGACGCTCGGCTGGCCGTACAACACGGGGTGGACGGGATCCTG
GTGTCCAACCACGGAGGGAGACAGCTGGACGGCGTGCCTGCCACGGTACA
GCCTAGTTCACGGCTATGTTCATGTGTCATTCATTCTGAAACAGACCATG
TTGATTTGATTATCTGGATGACATCCATGCAGGCATCTTTGGAAAAAAAA
GAAAATTTTTTAATCATTAAGTCTCATACTGTAAATCATGAAATGCAGCT
GCAAAATGAGAAAGTACATGCTGTAAACTTTTACAAAATTCAGAAAACAA
ATACAAATGTTGTAGAGTGCTAAAGTCAATTTCAAATTCAAAGACGTTTT
GAAAGTGAAAAAAATGAATCTATATTTTGGTATACCATATTCTGTGTGTT
TAGTTTTGTTTATCCTTCCTGATCACGTAGATTTCATAATGAAGGCGACT
TTTATTTGTTGCAACATTTTTTTTATTTGCACGCTCGCATCAGTTTTAGT
GTTCCCAGAGGATGTCGTCCATATAGTCAAATCAACATGGCCTTATACAT
AGCTAAAAAACTCCACCTTGTGTTTCAAGAAAAGAAATTTGTTATGCTCT
AGATCACTTAATTGCCTTCCTGCAACATGTGCTTTCTGTAACTGTCAATG
TAGGGAAATCTCTTGCAAGCCCCAATGTTGTGCCCTTGGAAAAGGCTCTT
AACACCTATTTCCTCATGTAAAGTATAGACCGGTCCTAACACCTGGATCG
ATAAGTTATTGCGGCCTGGGTATGATTTTATGATATTTCATGCAATCAAG
ATGGTTTCTGTTGTATTTACAGATACAAGCCCTGCCTGAGATAGTACACG
CAGATCAGTNGTGCAGGCAGATCTGTTAGAGGTGGACATGGACAGTGGAG
CATGGACGGTCTAGGTTGAACTTGAAGAATTGTGCTAGATGACCTATTGT
CGTTCTCCTCTATTATTGAACTTCCAGATAGAAGTCCTGCCTGAGATAGT
ACAGGCAGATCAGTTAGAGGTGGACATGGACGGTGGAGCATGGACGGTCT
ACGTGGAAGAATTGTGCTAGATGACCTATTGCCGTTCACCTCTGTTATTG
TATTTACAGATAGAAGCCCTTCCTGAGATAGTGCAGGCAGCGGGTGATAA
GTTAGAGGTGTACATGGACGGTGGAGTGCGGACGGGAACAGACGTTCTCA
AGGCCCTAGCTCTCGGCGCCAGGGCTGTCTTCATTGGACGTCCTGCAGTC
TGGGGTCTGTGTTATAAGGCGAGTTGCACATCCTCAAAACATATTAGGTT
TTCCTAACCTCTATTTAGGAACTTCAAGATACAGTTCTTCATGTTTGTCA
GGAACCATCCGAGTTCTTGTTTCTTTCACTGTAACTTTATGTTCACTGTT
TTCACGGTCACCTCTGTACTGTGAACTTATCATGACCGTGAAAAACCTGT
TGTAATCATTTATGACGAAAGACAGCAGATGCTGTCTGAAATGTCTGACT
GTTTCAAAATTTTATCCAGTTGCTTGAGTAACTATTTTTGGCGTATCTTA
CTAGACCTGGATGTCTAACCTTCATCAATGTTCTAATCTAACCGTACACT
TATTAAGTGATCTCATCACAATGTTACAGTCATCAAGAAGAACAGATTGA
GATGTTGTAACAGTTGTGATGGGAAATTCAACAGCTTCATTTTCAGCTGC
AGGCAATTTATTTTCCTACTACATACATGTATGTCAAATGTATAGGATTG
ATATCATGAATGTTTAACTGTGTGTTGTTGAACTCGTCACCTTTTTTTAC
TGCAACATGGGTCAGAAGGTATACGGTGTTGATTGCATTAGATTAAGTGA
TGAGTCCGAAGTTCAATAAAAGTCTGAGAATGCATCCAGGCGACAATACT
GTAAATGCAATTAAGTTCGCTTGGTTTTTATTTCGCGGTAGGGAGGAAAT
TGAGTGTTCACAGTGGTTTTAAGTGCACGTTTGAAACAATAGTAGCGCTA
CAGTCATAGGTGGGCAAAAGTTTCGCGGTGGTTTTAAGTTCACGCTGAAA
GTTCACTGCAAAAACCGCGAACATAAAACCACCGCAAATATTTCTGCATT
TACAGTATTGTCTTGATTTTTACCTGTAGGGACAAGAGGGCGTGGCTAAG
GTGCTCAGTATCCTGAAGGAAGAACTCAGTCTAGCCATGGCTCTTTCAGG
TGTGTCATTCAGTCAAATTCCTGCTATTGTTGTAAGTCCGAGTCATTCTT
CTACCAGAGTCTGCTATGACACTTTATGTTTATATATGATAGATGTATAT
GTCAGGGTCCAGTAGAAATTGAAATGTAACAGAATTGCTGATTCGACTGG
TAGGGACCACGATCAGAGACTCTGATCGGGATCTCATAATAACCTAGTAC
AATTGCTGATTGTACTGGTAGAATTGTAAATTGTACTGTTAGAATCCCGG
ATTGTACTAGTACTAGTAGAATTGCCGATTGTCTGGTAGAATGGCAGATT
GCATTGGCAGAATCGCTGATTGTACTAGAATCACCAATTGCACTGGTAGA
CTCACCAATTGTACACTCAAGTAGAATCGCCAATTTTACTGGTAGAATCA
CTAAGTGTACTGACTGGTAGCATTGCTGATTGTACTGGTAGAATCGCCAA
TATCAATTGTACTGGTGGAATTGCCGGTTGTACCGATAGGAATGCAGATT
GTACTGCCTGAGATCCAAATCGAGATCCAAATCGCGATCTCTACTGATAG
ATACTACGATCACAATCGCGACCTCTTCACAGGTAGAATCACTGATTCTG
CCTGA Coding sequence (CDS) from alignment at Sc0000359:11115..16369+ >transcript:BL96057_evm1 ID=transcript:BL96057_evm1|Name=transcript:BL96057_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=1161bp|location=Sequence derived from alignment at Sc0000359:11115..16369+ (Branchiostoma lanceolatum)
ATGTCGTCTGATTCTCTGGTTTGTTTAAAGGATTTTGAGAAGTACGCGAA
GGAACACCTCAACAGGAACTCATGGGGGTTCTTTTCGGCAGGGGCAGAGG
GGTGTCAGACACTGAGGGATAATGAAGAAGCCTTCAGAAGGCTCCGTCTC
CGACCACGTTTCCTGCGAGACGTGTCGGTACGAGACATGTCCGCTACTGT
CCTGGGACAGAGAGTAGACATGCCCATCGGAATCAGCCCAACAGCCAACC
AAGGCCTGGCCTCCTCGCAGGGCGAAATTGGTACAGCAAAAGCTGCAGCC
CAGTTCCAGACCTGTATGATATGCAGCACCTACTCCAACTTCACAATGGA
GGACATCATGAACTCCAGCCCCGACGGTCTCAAGTGGTTCCAGTTGTACG
TGCGTCCCGACAGAGAGACCACCGCGGGACTTGTCAGGAGAGCTGAGAGG
GCGGGGTACAAGGCTCTCGTACTGACCGTGGACCTGCCGATCGTAGGGAG
AAGGTACCCGGACTTGAGACATGGCTTCTCAATGCCTCCGCATCTGAGGG
TGGCCAACTTAGGCAATGCTGATCTCAGTCAGAATAAGAAAGACAGAAAT
GAAGCCCTGGACTACGGCATGGGAGGTCCTGACCAGTCCTCGGACAGAGC
ACTGTCCTGGAAGGACGTGGCCTGGCTGAGGTCCATCTGTAGTCTACCCA
TCATCCTTAAGGGCATCCTGACCGCGGAGGACGCTCGGCTGGCCGTACAA
CACGGGGTGGACGGGATCCTGGTGTCCAACCACGGAGGGAGACAGCTGGA
CGGCGTGCCTGCCACGATAGAAGCCCTTCCTGAGATAGTGCAGGCAGCGG
GTGATAAGTTAGAGGTGTACATGGACGGTGGAGTGCGGACGGGAACAGAC
GTTCTCAAGGCCCTAGCTCTCGGCGCCAGGGCTGTCTTCATTGGACGTCC
TGCAGTCTGGGGTCTGTGTTATAAGGGACAAGAGGGCGTGGCTAAGGTGC
TCAGTATCCTGAAGGAAGAACTCAGTCTAGCCATGGCTCTTTCAGGAATG
CAGATTGTACTGCCTGAGATCCAAATCGAGATCCAAATCGCGATCTCTAC
TGATAGATACTACGATCACAATCGCGACCTCTTCACAGGTAGAATCACTG
ATTCTGCCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000359 | genome | Sc0000359:11115..16369 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96057_evm1 |
| Biotype | protein_coding |
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