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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96077_evm1 >transcript:BL96077_evm1-protein ID=transcript:BL96077_evm1-protein|Name=transcript:BL96077_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=226bp
MSEPANRSPNGDEPKPVGTRSGRRSVLGHVKMSGQRSNIPEMFKVKVLVL
GPCESGKTVLSNFLADATEMSGDYMPTQGIRILEFENNGLNVGGRTVNAE
VELWDCSGDHKFEQCWPAIQLETNGVLLVFNPDQPNHDKELETWYSHFVS
QQGLKDSQCLAFAHHKPSTSDKARGHLSSLLSKVTVVHSNIDEDGDSVRQ
EFSNFLTNILSTMSDNRDKEELSIIS Run BLAST on NCBI mRNA from alignment at Sc0000404:174089..180573+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96077_evm1 ID=transcript:BL96077_evm1|Name=transcript:BL96077_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=6485bp|location=Sequence derived from alignment at Sc0000404:174089..180573+ (Branchiostoma lanceolatum)
ATGTCTGAACCCGCAAACCGCTCGCCCAATGGGGACGAACCTAAACCCGT
GGGAACGAGATCGGGTAGACGGTCCGTCCTCGGTCACGTGAAGATGTCCG
GTCAGAGGTCAAACATTCCAGAAATGTTCAAAGTGAAAGTTTTGGTGCTC
GGGCCCTGCGAGGTAAGAAGGCGCCAAAAATACATTGTCTACAGTTTTAC
CGAGTATTCTTGGCAACCTTTGGAGTTTTCTATCCTTAATCTTACCATTT
CGTTGGATTTTTGGTAAGCAGAGCCCTAAGTAGCGCGGGAAACACTGTCG
AAATTTTGACCAGCTCTCTCGCTTTGGGGGAGGGGGGCGTTGTTTCCATG
GAGATAGGAAGCCTTCGCCGATCTGGAAAAAAGATTATACGTATGCTTAC
TACTAGAAATGGTTTAGCATTATTCTTAATTTTTCAGCACCATAATTACC
ATTCATTAAGCAAATCTTAATTCAGATTGAAATATGAAGTAATTATCATG
TAGATTTTCTTTATGTCTGTGGCTTTTTTAGTTAACACGTTAGAGATATA
TTGACAGTTTGCATGTATATTTACCATGTAGAGCGGGAAGACGGTTCTAT
CCAACTTCCTGGCTGATGCTACAGAGATGAGTGGGGACTACATGCCCACA
CAGGGGATCAGGTGAGTTTGTACAATGATACAGCTGGTGGCATGGTGGCC
GTGTGGTTAGGGTTGTTGACTCAGAATCTAGAGGTGCCCTGGGGAAAGGT
ACTTTACTCCGATTAGCTTGATTCAGGTGAAAATGTGTACCTATCATTGG
TTAGCTATAAGGACGTTCTCTTCAATGGGACGTTCTCTTCGATTGGACGT
TAAGAGAGCCATATCCTGAGTAAGGGTCCTTCCCGGTGTGAGTGGATCAA
ACCTTACAGGCTAGTCTAATGCAGCTTGTACCTACTGTACAAAACTGGGG
TTAGGTAGTTTAACTGTTATGTGATGCAAATAAACCTGTTGCAGGCTTGT
TGTATTCTTGCTAGATGTCTTACCCATAACGTCTTGAATTTTCTTCTGTT
CACCACTTCAATGGCTAAAACCTCAGAAATTATACACAAATCCTCGAAAA
ACAGCCAAAGGAAAGGTTACTAGTAATCAATGTTTTTTTCCTTCCCTTTT
ATAGGATTCTGGAGTTTGAAAACAATGGGCTCAACGTTGGAGGGAGAACT
GTCAATGCTGAGGTGGAACTGTGGGATTGTAGTGGAGATCACAAGTAAGA
CTACAATTTTTATGTCATAAAGTTCAACTCTGTGAATAGTACAGTATTAC
ATCTGTCCTAATATTGCTACATAAGTTACTAATCTGCCAATAAAAGTTGT
CTTACATGTACCTTATTTCTAACACTATTATTTCTGGCTTGTGTGTCTGT
TTCTGCATACTTTGGCCAGCGTGACTTAAAAAGCTATGTATGGATTGTGA
AGATATTTGTGAAGATGAAGGTGAAGACCAATTTTAGGCTTCCTATAAGC
TTTCCTTTGTACTGGTTTGAAACCATTTCTTACTGTCAGGTTTGAGCAGT
GCTGGCCGGCCATCCAACAGGAGACCAACGGGGTTCTCTTAGTCTTTAAC
CCTGATCAACCCAACCATGACAAGGAGCTGGAAACATGGTACACACTATA
CATTCCTCTTTTTATGAAAAAGTTCCAATTTGGGTAAAAGTCGTTTTGAC
TATTTGGAAACTGGTAGAATTCTTGAAAAATACCATTACTTGCTGCTAAC
CTTTTCAGACATATGTACTTATTTGTGTTTCATACATTTGTATCAAAATT
TCAAATTGAACAAAACATCCTGCTGTTAAATGGACCCATTACACATGATT
GTGATTATTTTGGGCGATGCCCCAGGGGATAAGCTAATTGTATATTGTTG
TTGTTTCAGGTACAGCCACTTTGTCTCACAACAGGGTCTGAAAGATTCCC
AGTGCCTGGCCTTTGCACACCACAAACCCTCTACATCTGACAAAGCAAGA
GGCCACCTGTGTAAGTACATACCAAAAACTACTTCAGACCTACAGTACAA
AACTTAGAAGAAGTATATCTGTCCTGCATGAGAAACTTACAGATATTGGT
TAATGAAATTATCATAGTCAAAGTATGAAGTATTTTTGTAGCCTTTTCAT
CTCTAGGACTTAAATGTAGCATCAGGTACAGGTACTAGTAATGAGCTTCA
GGAATAGATATGATGTATGGCACTGGTTTAGTGGTTCATGGTGTGTTATA
ACGACGTTATAACAGCAGTTTTACAGGCTCCTCTCTCTCATCTAGTCCCA
TCCTCATCTTGAGGGTCGGGGACCATGGTCGCTTTCAGCACTAGCTTTCT
CCATCCTTCCCTGTCCTTTGCCCTCTGGGTACATGCATTCTGCAAGTGAC
CGTCCTGTCCACTCCTTTATGTCATCTCCCCATCTCCTGCGTGGCCTCCC
TCTGAAGATACAGATACATAATTTGGCATTCAGCATTTTAAGTTGGTCCA
AAAGGATTCTTGTGATGTCCTAACTGTACCCCATAGTATGCAGCCCTATT
CATTACAGATGATCAAACACTGATGTGGATAAACTGTGTTGATTAAACTG
AATTTTTTCATCATTACAACTTTTTCAGCCTCACTTTTGAGCAAAGTGAC
CGTTGTCCACAGCAATATAGACGAGGATGGGGACTCCGTCAGACAAGAGT
TCTCCAACTTCCTGACCAACATCCTGTCCACCATGTCTGACAACAGAGAC
AAGGAGGAGCTCAGCATCATCAGCTAGTCATGTGGTTATCACATGCTTGT
CATGTGATTGTCCCATGCTTGACATGTGATTGTCACATGCTCGTCATATG
ATTTCTCCCTTAAAACACCAGTAACTGTTGGTAATGTGTGATTCAAGTTT
ACAAGCATGCCTTGAGGGATATGTACATACTTTATCTATGTATATTTAAG
ATTGGTAAAATGAGCACTGGGAATAAAGAACAAAACTCTACGGAAAGTCG
TTTTAGATTGTCATTGTATTTTGGTTTAGGGTAGAATCTTGTGTAAGAAA
TATCAATTGTGTTATTAGTACATGTTACAATGTTTGAATTACAGAAATGA
TAAATGGTTGTTCCTGCACAAAGAACTATGCTTGTTCAAATTCTGTATGT
GAAAATGATATGTTTGACATTAAATCTGCATGTATCCTTAAAATCTTTGG
CTTTACGAGTTACAATATTAGGGGAAAAAGTTTTTTGTCCATATACATAG
GCCTCAGTAAGGGATTACACTTTTGAGAGATTTAGATATGTGTATAAAAT
TATGTGTATCCTTGCCATATCCATTCAAACTTTTATTTATGTTTGAATGT
GTGTGTGATGGACTAATGTAGTCTATGTGTACTTGTGTATGTGATTGTGT
ATACTATATGTGTATGTGATTTTGACATGCTTTTTTTGTGTATAACTGTG
TATGCATTTGTGTGTGTGCAAATGTAAGTATGTATCTGCGCAACACTGTG
CCTTTGGTATACCTTGTATGTCTTTTCATAGATTTGAAGCGGATGATTCT
CAAAGTTACTCATAGGTTAATTTTGATTTTTAATTTGAAAGGAGGCCCTA
GCATTAAATTAATCTTCATTACCCAATGAAAAGGCTGATAAGATACTGAA
TAAGCAAGGTTGGAATAAGCAATGTTTATTTTGATCATTCAAGAATGGCA
ACAGTAATTATCTACATTTTTAATACTAAATATATCTATCTCACTATCAT
CCTCATCTCTCTGTATAAAGATAAAATCTACCTGGTATGACTACTTGTAT
TTCCCAAACCACTCTCTGTCATATTTACTGATATATTGACAACATCCCAT
CATGTTCTTTTTCACCACGTCTTCAAACGTGAACTCGTTCTGGTTGTTCT
CCTGCCTCCATGTCTCCTCCTTCTCCTCCTCATCCAACATCTCCTGACTC
ACGACCTTGGCCTGGAAGGGTAACTTCTGTGCAATCTCCCTCAACATGGG
GTACACCACCTCAAAATCCATCTTCCCTCCCATTTCTACAATGATGCGGT
CTTGTTTAATTGGCGTGACGTAGTGGTCGATCGCACCCTTCCCGCCGCCC
ATGCGGTGGCCCTGTCCTTTTTTGGTCAAGGGTTTGTAAGGTGCCTCGAT
GCGCCATTTTGCCCACATCGTTTTGGTGTCCATGCGGCGGTTGATGGTGA
GACGGATCATCTCAAAGTGTCCCCACCTCATAAGTCCTGGAGAGAGAGCC
TANGCTGGTGGCATGGTGGCCTAGGCCTTGTGGTTAGGGTTGATGACTCA
GAATGGTATCAGGACATTTCGGCCCATGGACAGTTCGGCCCGACGTTTCG
GCCCCAAGTCCAGGACGGTTTGGCCCAGCTGATTCTTATGTGTATGACTG
TTACTAGAGGTGCCCTGGGGAAAGGCACTTTACTCCGATTAGCTTGATTC
AGATGAAAGTGAGTACCTACCCTCCGTTAGCTATAGGGACGTTCTCTTTG
ATGGGACGTAAAAAGAGCTACATGTTTAGCAGGGGTCCTTCCCAGTGTGA
GTGGATCAACCTAATAACGTTACAGGCTGGTCTTACACTGTACCCGAACT
ATCCCCCAGTGGAATGCCCTGCCTGGCGCGGTTGTTATGGCTCCCACCGT
TGAGTCATTCTGCAACAGGCTGGAGGCCTGCCCGCCTTAGCCTAGGACCT
CCTCCCCCCCTACTTTGCCCTCTTGTGGGGTCATTTGGGGGTATCTTAAG
TTGAAGTTGTACAAAACTGGTGTGCTATGCGTACACTTTAAGGCAGATTA
CCAGTTGCGTGTATGATGCAAACAAACATGTTGTTAAAACTTGTGGTATT
CTTGCTAGATATTTGACCCATAACGTCTTGACTTTTCTTCTTTTTACTAC
TTCAATGGCAAAAACCGTTTGAAATTATAACATGCAACCTTTGAAAAACA
ACAAGATGAAAGGTTACATGTTTTCCCTTTTTATAGGATTCTGGAGTTTG
AAAACAATGGGCTCAACGTTGGAGGGAGAACTGTCAATGCTGAGGTGGAA
CTGTGGGATTGTAGTGGAGATCACAAGTAAGACAAATTACAATATTTATG
TCATAAAGTTCAACTATGTATCCAAATAGTATGTATAAAATCTGCCCTGA
TATTGCTAAGATACATATACATTTGTACAATGTACTATAGTATTTACTAA
TCTGCCAATAAAAGATGTTTACCTTATTTCTACTACTGTACTATTTATGG
CTTGTGTACCTGTTTCTGTATAGCCTATTATCTGTATTGATAGTAGTATC
GGTAGTGATAGGATGGCACCCAGGCTAGCTTCTGCATACTTTGACCAGCA
TGACTTAAAAAGCTATGGATGGATTGCAAAGATATTTGGTATGCAGGTAA
CGTTAAGTTCCTGGAAAGACAAAGGTTGCGGTCGATTTTGGGCCTCCTAT
AAGCTTTTCTTGGTTCTGTTTTTTAACCATTTTTTACCATCAGGTTTGAG
CAGTGCTGGCCGGCCATCCAACTGGAGACCAACGGGGTTCTCTTAGTCTT
TAACCCTGATCAACCCAACCACGACAAGGAGCTGGAAACATGGTACGCTT
TTTTCTCTTTTTATGAAATGGTGACCTCTCGATTTTGTGTCCGCTAACAT
AGCCATTTGGGCATTCAACGCCACAATTTGCTATTTGGCAACTGGTATTT
GTGTTTCATACATTTTACTAAAATTTCAAAAATTAACAATTTTGCCTGCT
GTAAAAAGGACCTATTAATCACTATTCAATTGTCATTGTGACCTTTTTGT
TTCAGGTACAGCCACTTTGTCTCACAGCAGGGTTTGAAAGATTCCCAGTG
CCTGGCCTTCGCACACCACAAACCCTCTACATCTGACAAAGCAAGGGGCC
ACCTGTGTAAGTACATACCAAAAGTACTACTTCAGACCTACAGTACTAAA
CTTAGACGAAGTATATCTGTCCTGCATGGGAAACTTAATGAAATTATCAC
AGTCAAAGTATGAAGTATTTTTGTAGCCTTTTCACCTCTAGGACTGCATC
TTAAATGTAGCATCAGGTACAGGTACAGTACTAGTAATAAGGTTTAGGTA
CAGATATTATATACAGCACTGGCTCATGGTGTGCTATGACGACGCCGACG
AGTGGTTTTACAGGCTATATAGATACATGATTGTACATAATTTGGCGTTC
ACGCTTTAAGTTGGTTCAAAAGGATTCTTGTGATGTCGTAACTGCACCCC
ATAGTATGATGCCCTATTCATTACAGATGGTCAAACACTGGTGTGTTGAT
TAAACTGATTTTTTTTCATCATTTCAACTTTTTCAGCCTCACTTTTGAGC
AAAGTGACCGTTGTCCACAGCAATATAGACGAGGATGGAGACTCCGTCAG
ACAAGAGTTCTCCAACTTCTTGACCAACATCCTGTCCACCATGTCTGACA
ACAGAGACAAGGAGGAGCTCAGCATCATCAGCTAG Coding sequence (CDS) from alignment at Sc0000404:174089..180573+ >transcript:BL96077_evm1 ID=transcript:BL96077_evm1|Name=transcript:BL96077_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=681bp|location=Sequence derived from alignment at Sc0000404:174089..180573+ (Branchiostoma lanceolatum)
ATGTCTGAACCCGCAAACCGCTCGCCCAATGGGGACGAACCTAAACCCGT
GGGAACGAGATCGGGTAGACGGTCCGTCCTCGGTCACGTGAAGATGTCCG
GTCAGAGGTCAAACATTCCAGAAATGTTCAAAGTGAAAGTTTTGGTGCTC
GGGCCCTGCGAGAGCGGGAAGACGGTTCTATCCAACTTCCTGGCTGATGC
TACAGAGATGAGTGGGGACTACATGCCCACACAGGGGATCAGGATTCTGG
AGTTTGAAAACAATGGGCTCAACGTTGGAGGGAGAACTGTCAATGCTGAG
GTGGAACTGTGGGATTGTAGTGGAGATCACAAGTTTGAGCAGTGCTGGCC
GGCCATCCAACTGGAGACCAACGGGGTTCTCTTAGTCTTTAACCCTGATC
AACCCAACCACGACAAGGAGCTGGAAACATGGTACAGCCACTTTGTCTCA
CAGCAGGGTTTGAAAGATTCCCAGTGCCTGGCCTTCGCACACCACAAACC
CTCTACATCTGACAAAGCAAGGGGCCACCTGTCCTCACTTTTGAGCAAAG
TGACCGTTGTCCACAGCAATATAGACGAGGATGGAGACTCCGTCAGACAA
GAGTTCTCCAACTTCTTGACCAACATCCTGTCCACCATGTCTGACAACAG
AGACAAGGAGGAGCTCAGCATCATCAGCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000404 | genome | Sc0000404:174089..180573 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96077_evm1 |
| Biotype | protein_coding |
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