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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96284_cuf0 >transcript:BL96284_cuf0-protein ID=transcript:BL96284_cuf0-protein|Name=transcript:BL96284_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=429bp
GRVDEQGCQDINECLSNTHGCSHMCVNTQGSYSCACPEGYLLGDNRRTCA
NVNECAEDNGGCAQVCVDTEGSFRCSCYPGYKIGDEFMCTDVDECAEGRD
GCHANAECVNNEGSYDCYCRAGFEGDGRTCTDQDECETADCQQLCTNTPG
SFMCGCQEGYLLLDDKRSCDNIDECSLDDHGGCRHICRDTEGSYYCECEP
GFHLAPDGKACNRDNVITANQGGDGESAVPSEQTGGTPLPMAVGLSIAAV
LLILLVLAFVKCRPRINQSAAGIGKSLPTVFFKNPLKDLDHIYDNPKFLP
EETVINKKTVDEKQMHVILPQQPAFPPPPPPPMVPRGTCPSRSTAASPAH
PRSTPGSRHAPRVRAENPYVLDPTRHIQHNSHATDPGQGAEVINYGTFPG
QRPEVNNDDTVSEHIYETLDHQHIPVSMI Run BLAST on NCBI mRNA from alignment at Sc0000036:997736..1003955- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96284_cuf0 ID=transcript:BL96284_cuf0|Name=transcript:BL96284_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=6220bp|location=Sequence derived from alignment at Sc0000036:997736..1003955- (Branchiostoma lanceolatum)
GGGAGAGTGGATGAACAGGGATGTCAAGGTTTGTATACCTTTTTGTTGGT
AGCACATTCTCTTGCATTTTATATCAAAATGGTAATGCCAAAGGCCTGAA
TTTTATAATTCTACAATAACTGCTTTCCTGTAATGTTTTCCGCATGGTCT
TAAGAATATCAATGAAAAATATTATAATATCATTACTAATCTTTGTATGC
TCTCCACTTTAAAATGCTTGGTCTGCTATTCTTAGTACAGTTTTGAAGGA
CAATCTACGGTATGTACATGTATCAAAAGATACCTGTCCTTGGTGCTAAA
ATGGACATCAGTAATAGATAGTAGCAAAATGTATGAAATTGTAGAAGCTT
CTTGTTTTCAATCAAAAAGTCCTGTAAACAAGGAAAAGAGCAATGTGTTT
ACTTTGTGTTGTCTTTTTCTGACGTAAATTAGTGCCTGTCAAACACACAG
GGCTGCTCTCACCTGTGTGCGAACACACAGGGCAGCTATTCCTGTGCCTG
TCCAGAGGGTACCTTCTCTAGGATTCTTTAATCAACGAAAAATTGAGAGT
AATGTATTTATTTCGTGTTGTCTTTTTCAGACATCAATGAGTGCCTGTCA
AACACACACGGCTGCTCTCACATGTGTGTGAACACACAGGGCAGCTATTC
CTGTGCCTGTCCGGAAGGGTACCTGCTCGGGGATAACAGAAGGACATGTG
CGAATGTTAACGAGTGTGCGGAGGACAACGGAGGATGCGCACAGGTGTGC
GTGGACACAGAGGGAAGCTTCAGGTGTTCATGTTACCCTGGCTACAAGAT
TGGGGATGAATTCATGTGCACAGGTGAGACACTTATTACAGTTAAGCAGA
GGTAGTTTTTTTAGAATCTTATTTCTTAGATCTTAGAGACTACATCTAGT
TTATTCCTGTTCTACAGGCTCTGAAGACTTTTAAAATACAAGAGAGTAAC
AATTTGTTTGACATGCGGCTATCCATCTCTAAAATGAAAATGTATGCACG
ATAATTGCTTTTTATATTGTTGTGCTCCTGGTTTTCCTGTTGTGTTTACC
AGTGATACATTCCTGCATCAACTGTACTGTTCAAAGCTTTTCTTTGTTAA
GAGAGTGTGAAATATAGAAATTATGTAAAATCATTTGCAAGAATTCCTAG
ATTCTGTCTTGAATTTTCATCACTCAGATGTTCGATTAAAAATCTTACAC
CCCTTGCCAGGGGTCGACCGAAAAAAAGGCTAGTGTCGGCGGGTTTTTGC
TAGGGTCCGTCAGGTAACCGGAAACACAGCATTTTTCCCTAGTTAGTTAA
GTTAAAGTCCTCCCGCAGCAGACGGTGCGTAGGGCGGTGCCCATCTCCGT
TTTGGCGGCCCTTGGGCCACACAACTTTATGCAATCTCTACAAGAGGGGG
TTGTAGTGGTGTGTGTTTAACTACCATACTCTTTCCCGAATGCTGAGTGC
TAAGCAGAGAAAGCAGTATGTACCATTTTCAAAGTCTTTGGTATGACCCG
GCCGTCGATCGAACTCACAACCTACTGTATGCAAGGCGAACACTCTACCA
CTAGCTATATAGGCTTTTTGTATAAATACAATTAATTTCAAACTACCAGT
AATAGCAATTTGATCTTCCGCTGTGTCCCACAGATGTGGATGAGTGTGCT
GAAGGCAGAGACGGTTGCCATGCCAACGCAGAGTGTGTAAACAACGAAGG
GTCGTACGACTGCTACTGTCGGGCTGGGTTTGAAGGAGACGGACGCACCT
GCACGGGTATGGCAGAAATATACTTCTGTATTTAAAAAACAAATTCCTGT
AACAGTTAGAAAAAGAATGTTACATTTAAAATGGATATTTTGTTACTAGC
ATTAATATATCATTGAAAGCTACAACAGTACTAGAATTTGTACTCTTTGC
TTGTTCAACAACTTGAAGTGTGTGATTCATAGTACCATACACTGTACCAT
ACACTTTAAAATAAAACATGCATGCAACCCAAACTTACAATAAAACTCCT
CTACATGAAAAGTCAAAGTAGCAAGAATAGTTAACCTGCTTATCAATGAT
ATCAACTGAAAGTGGGATCATTTGTCTTCCACTGTCTCGGAAAAAGAATT
CAAACCCAATAAGTTAGAATTTAGTGTCAGTATAGTAAGACTAGCATAGT
CACACGCTATATTGTTATCCATTCATGTTACATTTACGTCCTTTCATGTT
ACATTTACTAGCAATTAGCCTAGGGGCATGAGAACTTACAATAAACTTTC
ACATCATTACTAATGCTGCGAGTTTGAATTTTTCGTTCTAAGCAAAGATA
CTGATGGGTCCCCAGAAATTGCGAAATGGAATGAAATTGACCGAAATGGA
ACAAAATTGACTATTAAAGCTGAATTTTAGTTAATCCACCTGGCAACTGA
TATTCAAAAAGGACTTCTTTTTTATTCAACAGACCAGGATGAGTGTGAAA
CAGCCGACTGTCAACAGCTGTGCACCAACACACCTGGCAGCTTCATGTGT
GGCTGTCAGGAGGGTTACCTCCTATTGGACGACAAGCGGTCATGTGACAA
CATTGACGAGTGCTCATTGGACGACCACGGAGGGTGCAGGCACATCTGTA
GAGACACGGAGGGCAGCTACTACTGCGAGTGTGAGCCAGGATTTCATTTG
GCGCCTGATGGAAAAGCTTGCAACAGTAAGTAAATTTTTAATAGTTTTTG
GGGCTAGAGCGTTGGGCTCATAGCCAATAGGTCCCGGGTTCGATACTCGT
CATGCCCTGGCGTTGTTTCCATGGGAAAGGTGTTGGGCTCAGAGCCAATA
GGTCCCGGGTTTGATACTTGTCATGCCCCGACGTTGTGCCCTAGGGAAAG
CGTCAATTTACACGATATTGTATGATGGTGGAGTGACGCCAACCAAGCTT
CTTCTTCTAATCTGTCAACATTGTGCAAAAAAAAATCACACACACGGATT
TGGTGCGCCAATATGTGTCAACGTCTGCATGTTTTCCACTAAGAGCCGTA
AAAATATTTTGCCTAATCGGACAAACAATACTGTAAAATTCATTTAAGTT
TGCATTGTTTTTATTTCGCAGTAGGGAGAAAATGGAGTGATCGCAGTGGT
TTTAAGTTTGCAGTTGAAACAATAGTAGCGCTACAGTCATAGGTGGGCAA
CAAATTTCGTGGTGGTTTTAATTTCGCGCTGAAGACTTCAGCATGAAAAC
CGCGAACATAAAACCATCGCAAACATTTCTGCATTTACAGTTAGAAGTCT
GAAGAAAACACAGGAACAGTCTCTAATATTTCAGAGGTCAACTTGTCCCC
TGCTTATGAATAGTATTTACTTATTGGCTCTTTGGCGTTTCGTAATAGTC
AGAATGTATGGTTGGAAAACAAACAAAACATCTTTTTGAGTCCACATGCC
TAATACATTGTATGGCTCAATAGCAAACTTTACGGCTTCTCATATACATA
GTGTTTACCTTTAGTTTCTTAACATAGTAAAAAACAATCCGCATTGATGC
CCTTTTCGATAGCTTACTCAATTAATCTTAGATGTATGACTTGATTTTTA
TCATGTGATTTCTGTTTATACAGGAGACAATGTAATAACAGCCAACCAGG
GAGGAGATGGGGAGAGTGCAGTTCCATCAGAGCAGACAGGGGGCACTCCT
CTGCCCATGGCTGTGGGACTGTCCATTGCTGCAGTACTGCTGATCCTTCT
TGTGTTGGCTTTCGTCAAATGTCGACCCAGGATCAACCAGTCCGCAGCTG
GGTAAGTAGCTTTTTTTCTTTAAGGCATCCTCATTTGAGGTGAAGCATAA
TGCTTTTTCAAGTAGCTCATCAGTCGACGTGTGGCTGTCATACAAGTCTG
GGATGCACCAGTTCTCCCGTCCGGGTGAATGGTGTAAATCACCGTATGGC
TGATACGAGACAGAGGTTCGCAAGGCCTCCATCCGGGTGATTTGTAGTGA
ATCACAAACTCCAGATAGAACGATTTGGACCATCGCACACCGGGGCATGC
CCCTACTCTTTTTAGCTATAGGATCCACCAAACAATGCTTTATACATATT
GCGCATTAGATGATAAATAGTCTACTGTGAATGTGTAGAGTGACACATTT
GTATTGTGAAATACTGTAAAATGCAGAAATGTTTGCGGGAATTTAATTTC
GTGGTAGAGAAAAAATGGAGTGTTTGCAGTGGTTTTGAGTCGGCGTTTGA
AACAATTATAGTAGCGCTACAGTCACCCAATGCAATGGCTTTTCACGGTG
GTTTTAAGAGTTCACTGTCTACAAATTTAACCGCGAACATAAAACCACCG
CGAACATTTCTCCATTTACAGTAAGCGGACTGAACTGATTATCTATATAT
TCACTTATACTAAGACCTATAATGCTCAGTTTCCAAGCTTTACAACTAAA
GTGGGTATCTCACTGAAGCTGTGTCATGTTGACGACCTCACGGCAAACAA
GCAATTCGACAGAGCCCTCAATGAATTTCATTGATAAAAAAACAAATCTT
TTTACGCTGTGTTTTGTTGCATTCTTAGTCAAACTTGCATAAAGTCAAGG
GTAACAAAACTCCAATTCAGGATTCACAGCTTCAGTGAGATACTTGCTAA
TAAGATGCTATCCAAAAGAAAAGGCAAAAAAATTAGGAAAATGAAAGAAG
GTGTTTATGTTGAATGCTGAAAAATGGAGACTTAGAAAAGACAATGAGCA
TAGATGGTCAGAACTTCAAATCTACAATCGGTTTTGGTTTTATGCCAAAT
GACAGTTAAATGTACTTACTAATAGGCAACTGGACAAAATTCGGAAATAC
AGTTTCAGACAGTATTCGCAGTTACAAATTTTATCCAGCTGCTTGAGTGG
CTGTCATTTGGCTTATCTTATTACCTGGATGTCTAACCTTCATCAACGTA
TCTTGGTTTTACAGCATAGGGAAGTCGCTACCAACGGTGTTCTTCAAAAA
CCCTCTCAAAGATCTGGACCACATTTACGACAACCCAAAATTCCTGCCTG
AAGAGACTGTCATCAATAAGAAGACTGTCGATGAGAAGCAGATGCACGTC
ATTCTGCCACAACAGCCCGCCTTTCCACCTCCGCCGCCACCTCCAATGGT
ACCGAGAGGCACATGCCCGAGCAGGTCTACAGCTGCATCACCTGCCCACC
CGCGCTCAACACCTGGCAGTCGTCACGCCCCGCGGGTGAGAGCGGAGAAC
CCGTACGTCCTCGACCCCACCAGACACATCCAGCACAACAGTCATGCTAC
TGACCCAGGTCAGGGGGCAGAGGTCATCAATTATGGTACCTTCCCAGGGC
AAAGGCCAGAGGTCAACAATGATGACACAGTCAGTGAGCACATCTATGAG
ACCCTTGATCATCAGCATATCCCTGTCTCAATGATTTAAATTGTACCAAG
AATGATTAAAATATGCATAAGGTCAATAAGGATATAGTCTGGTACAGAGA
TTCAATCAGCAAAGGATATATACATATATGCTGATAGTGAGTTCACAGCA
CAATAATGTTGTAGATGGTATACTATCTGGTATACGTGTAGGAGTGTAGC
CTCCTTTGCAGACTTTCTGGGCGGTGCCTAGCCTGATTTCAATCAAGCCT
CCTGTGACTGTTCGCCGCCCTGTAAAGGCTCGCCGCGGGGAGGGGAGAGA
AACCCCCGGACAGCTGGAGTTTGCGTTGTGCAGACTAGGCGGCGCCGGTA
TCTTCGGCCGACAAATGTGATATCTCCGGCAAAAGAACCTTGCCCCGATT
TGTCAAAAATTGGGAATTGGCGCTCTCCCAAAAAATGCCGGCCCCTCCCA
AAAAGTCTTTAAAGGAGGCTAGTAGGAGTGGACATTTGATGAAAGCTTGC
TTTATTGCAATGCAGTACTATACATGTATGGCATCATTGTTTATAGGCAC
TATGGCACAATAGAATCTATGCATTTTGAAAATTTCATGCAACGACTGCA
AAGCAGTCTTTTTATGTGTTACAGTATACTTTATCAGTTAATGTTTTCAC
CATAGGAGTGCCAATGTTATTTGCCAGCCACTGTTTGCCATATTGTAAAT
GTAAAAGTTTCAAGGCTAATATGCACACGTATTTGAGTGATTTGAGCTTG
ACGTATGGGACTTTTTCTAAAAGATTAATCTTCACATATATACTCGTTTT
AATGATAAGATAGTCAGACCTTCATTTGAATGGATGAATACATTAAAATA
ACAGTGTGAACCAATACTAC Coding sequence (CDS) from alignment at Sc0000036:997736..1003955- >transcript:BL96284_cuf0 ID=transcript:BL96284_cuf0|Name=transcript:BL96284_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1290bp|location=Sequence derived from alignment at Sc0000036:997736..1003955- (Branchiostoma lanceolatum)
GGGAGAGTGGATGAACAGGGATGTCAAGACATCAATGAGTGCCTGTCAAA
CACACACGGCTGCTCTCACATGTGTGTGAACACACAGGGCAGCTATTCCT
GTGCCTGTCCGGAAGGGTACCTGCTCGGGGATAACAGAAGGACATGTGCG
AATGTTAACGAGTGTGCGGAGGACAACGGAGGATGCGCACAGGTGTGCGT
GGACACAGAGGGAAGCTTCAGGTGTTCATGTTACCCTGGCTACAAGATTG
GGGATGAATTCATGTGCACAGATGTGGATGAGTGTGCTGAAGGCAGAGAC
GGTTGCCATGCCAACGCAGAGTGTGTAAACAACGAAGGGTCGTACGACTG
CTACTGTCGGGCTGGGTTTGAAGGAGACGGACGCACCTGCACGGACCAGG
ATGAGTGTGAAACAGCCGACTGTCAACAGCTGTGCACCAACACACCTGGC
AGCTTCATGTGTGGCTGTCAGGAGGGTTACCTCCTATTGGACGACAAGCG
GTCATGTGACAACATTGACGAGTGCTCATTGGACGACCACGGAGGGTGCA
GGCACATCTGTAGAGACACGGAGGGCAGCTACTACTGCGAGTGTGAGCCA
GGATTTCATTTGGCGCCTGATGGAAAAGCTTGCAACAGAGACAATGTAAT
AACAGCCAACCAGGGAGGAGATGGGGAGAGTGCAGTTCCATCAGAGCAGA
CAGGGGGCACTCCTCTGCCCATGGCTGTGGGACTGTCCATTGCTGCAGTA
CTGCTGATCCTTCTTGTGTTGGCTTTCGTCAAATGTCGACCCAGGATCAA
CCAGTCCGCAGCTGGCATAGGGAAGTCGCTACCAACGGTGTTCTTCAAAA
ACCCTCTCAAAGATCTGGACCACATTTACGACAACCCAAAATTCCTGCCT
GAAGAGACTGTCATCAATAAGAAGACTGTCGATGAGAAGCAGATGCACGT
CATTCTGCCACAACAGCCCGCCTTTCCACCTCCGCCGCCACCTCCAATGG
TACCGAGAGGCACATGCCCGAGCAGGTCTACAGCTGCATCACCTGCCCAC
CCGCGCTCAACACCTGGCAGTCGTCACGCCCCGCGGGTGAGAGCGGAGAA
CCCGTACGTCCTCGACCCCACCAGACACATCCAGCACAACAGTCATGCTA
CTGACCCAGGTCAGGGGGCAGAGGTCATCAATTATGGTACCTTCCCAGGG
CAAAGGCCAGAGGTCAACAATGATGACACAGTCAGTGAGCACATCTATGA
GACCCTTGATCATCAGCATATCCCTGTCTCAATGATTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000036 | genome | Sc0000036:997736..1003955 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96284_cuf0 |
| Biotype | protein_coding |
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