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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96373_cuf13 >transcript:BL96373_cuf13-protein ID=transcript:BL96373_cuf13-protein|Name=transcript:BL96373_cuf13|organism=Branchiostoma lanceolatum|type=polypeptide|length=1079bp
TTVSTTTQPTTTESTTVSTTTQPTTTESTTVSTTTQPTTTESTTVSTTTQ
PTTTESTTVSTTTQPTTTESTTVSTTTQPTTTESTTVSTTTQPTTTESTT
VSTTTQPTTTETTTVSTTAQPTTTESTTVSTTTQPTTTETTTVSTAAQST
IPTSCGKVCNFTDWMNSYNPSTDMQLNDVESLDNLRSRFSFCETPMGIEC
RYVENPSLDFNDHHQTGVTCQVDTGLYCDSSLTSMRACMDYEVRFECCHV
PDSCKTTTTMTTTTAPTTAVTTEKQPPTTTPESTTVSTTTKPTTTVSTTT
QPTTPEGTTISMTTTPTTTVSTTTVLTTTEATTSITTKGTTSIPTPTGSP
SPYPTTTVSTTPMTTSTHSTTLLPTTTPIRPTTTKMTTTQPTTTRTETTH
LATTEEFTTLPGPTTTEMQPTQPTTTKLETTPTSCGKVCNFTDWMNSYNP
STDMQLNDVESLDNLRSRFSFCETPMGIECRYAENPSLDFNDHHQTGVTC
QVDTGLYCDSSLTSMRACMDYEVRFECCHVPDSCKTTTTMTTTTAPTTAV
TTEKQPPTTXTTAVTTEKPPPTTPTSSVTTEEPTTTITPTTTGTTEEPTT
KTAPTTTVSTTTEGTTTISTTPPVKTTTEYCQEICVWSEWMNSDYPGAGV
PNDNETFAHLRESSLEFCERPDDIECRLDRTPSIDFNAVKQSGVECDVSS
GLLCLSSVQPRESPYCYDYSIRVKCCSPPAYCTTTQRTTTPTTTVSTTTQ
LTTTETSTTAMTPTGSPSPTQPPTTESTTVSTTTQPTTTESTTVSTTTQP
TTTESTTVSTTTQPTTTESTTVSTTTQPTTTESTTVSTTTQPTTTESTTV
STTTQPTTTESTTVSTTTQPTTTESTTVSTTTQPTTTESTTVSTTTQPTT
TESTTVSTTTQPTTTESTTVSTTTQPTTTESTTVSTTTQPTTTESTTVST
TTQPTTTESTTVSTTTQPTTTESTTVSTTTQPTTTESTTVSTTTQPTTTE
STTVSTTTQPTTTESTTVSTTTQPTTTESTTVSTTTQPTTTESTTVSTTT
QPTTTESTTVSTTTQPTTTESTTVSTTTQ Run BLAST on NCBI mRNA from alignment at Sc0000465:119709..124153- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96373_cuf13 ID=transcript:BL96373_cuf13|Name=transcript:BL96373_cuf13|organism=Branchiostoma lanceolatum|type=mRNA|length=4445bp|location=Sequence derived from alignment at Sc0000465:119709..124153- (Branchiostoma lanceolatum)
CCACCACTGTTTCCACGACAACCCAGCCCACCACTACAGAATCCACCACT
GTTTCCACGACAACCCAGCCCACCACTACAGAATCCACCACTGTTTCCAC
GACAACCCAGCCCACCACTACAGAATCCACCACTGTTTCCACGACAACCC
AGCCCACCACTACAGAATCCACCACTGTTTCCACGACAACCCAGCCCACC
ACTACAGAATCCACCACTGTTTCCACGACAACCCAGCCCACCACTACAGA
ATCCACCACTGTTTCCACGACAACCCAGCCCACCACTACAGAATCCACCA
CTGTTTCCACGACAACCCAGCCCACCACTACAGAAACTACTACTGTTTCC
ACAACAGCCCAGCCCACCACTACAGAATCTACCACTGTTTCCACGACAAC
CCAGCCCACCACTACAGAAACTACCACTGTTTCCACAGCAGCCCAGTCCA
CCATCCCAACGTCCTGTGGGAAGGTTTGCAACTTTACAGACTGGATGAAC
TCCTACAATCCCAGCACTGATATGCAGCTGAATGATGTGGAGAGTTTGGA
CAACCTTCGTAGCAGATTCAGCTTCTGTGAAACACCAATGGGCATCGAGT
GTCGATATGTTGAAAACCCCAGCCTGGACTTCAATGATCATCATCAGACT
GGGGTAAGGACCAGACAGAAACCTTCTTTTGATGTATCTTAATTTATAGA
GAAAAATTAGTAACAAGAAATGCTGGCCGGGCGCCAAGATGTTAATAGCT
GGTTGGGTGGCGTGAGTGTTATGACGATATGTGCCCTAGATAATTGGTCA
CCTTCAGTTGGTGATTTGGATTAGACTAATGCTAATAAGACTGGACTTAC
TAGTAGATGCACACTGCTTATAACATTAGTTGTGTCAAAGTGGATGTCAA
TGATATTTAAATGCATTTGTTTTGCAAATTTATCTTTGAATATCCCAGTA
GAAATGGAACTTATCAATGGTTTATCATCTCAATACAAATTCTTATTACA
TTTTCAGTCTTTGTCTTGATGAAAATTTGAAAGTCTTGTCCATATACTGT
GTTATCCATGTTTGAAGTCAGTGTGCTGGAATCTGCCTGTCCTATCTGTA
GAATTGATGGTGTTTTTTTTGCTGTTCAGGTGACATGTCAGGTGGACACA
GGCCTGTACTGTGACTCCAGCTTGACTAGTATGAGGGCCTGCATGGACTA
TGAGGTGAGGTTCGAGTGTTGCCATGTGCCTGACTCATGCAAAACAACTA
CCACCATGACAACAACAACAGCCCCAACCACCGCAGTGACAACGGAGAAA
CAACCACCAACAACCACTCCAGAATCTACCACTGTTTCCACGACAACAAA
GCCCACCACCACTGTTTCCACAACAACTCAGCCCACCACTCCAGAGGGCA
CCACTATTTCCATGACTACCACACCAACTACAACAGTTTCTACAACAACA
GTGCTGACTACCACAGAGGCAACCACTTCTATAACAACAAAAGGCACCAC
ATCTATTCCTACACCTACAGGCTCACCATCGCCTTATCCAACAACCACTG
TTTCCACAACCCCCATGACTACCAGCACACATTCCACAACTCTGCTCCCC
ACAACTACCCCCATCCGACCCACCACAACTAAGATGACAACTACTCAGCC
TACTACAACCAGGACGGAGACAACACACCTGGCAACGACTGAGGAATTCA
CAACACTACCGGGTCCTACAACAACTGAGATGCAACCCACACAACCAACA
ACAACAAAACTGGAAACCACCCCAACGTCCTGTGGGAAGGTTTGCAACTT
TACAGACTGGATGAACTCCTACAATCCCAGCACTGATATGCAGCTGAATG
ATGTGGAGAGCTTGGACAACCTTCGCAGCAGATTCAGCTTCTGTGAAACA
CCAATGGGCATTGAGTGTCGATATGCTGAAAATCCCAGCCTGGACTTCAA
TGATCATCATCAGACTGGGGTAAGGACCAGATAGAAATATTCGTTTGTAG
TATCTTTAGTTCCTAGTAATGTATTCAGAAAAGTTAGTAATAGATTTCAA
TGTCTCGTCCATATACTGTGTTTGTTGCATCCATATTGGATGTCAGTATG
TTAGAATCTGACTGTCAGATGTGCTTAGGATTAATGTGTGTTTTTTTGCT
GTTCAGGTGACATGTCAGGTGGACACAGGCCTGTACTGTGACTCCAGCTT
GACTAGTATGAGGGCCTGCATGGACTATGAGGTGAGGTTCGAGTGTTGCC
ATGTGCCTGACTCATGCAAAACAACTACCACCATGACAACAACAACAGCC
CCAACCACCGCAGTGACAACGGAGAAACAACCACCAACAACCNCAACCAC
CGCAGTGACAACGGAGAAACCACCACCAACAACCCCAACCTCCTCAGTGA
CAACGGAGGAACCGACAACAACAATAACCCCAACCACCACAGGGACAACG
GAGGAACCAACAACAAAGACAGCACCAACAACCACAGTGTCCACAACTAC
AGAGGGCACCACAACTATTTCTACAACACCACCTGTGAAGACTACCACTG
AGTACTGCCAGGAGATTTGTGTTTGGTCAGAGTGGATGAACTCAGACTAC
CCTGGTGCTGGTGTCCGTAAGTACCTTTAACAATGTTACTTCCTGATCAT
AAAGACATTGGTTTTGATAGATAAGATGTGTACAGATACACCATGATTAT
GTATTACAGTCTATTTTTATCTAGCTGCGGTTGACATTCAAATTTATAGC
CACACACTGAATGTTTGCTTGTTTTCTTCATTTGCAGCCAATGACAATGA
GACCTTTGCCCATCTGCGGGAAAGTTCCCTGGAGTTCTGTGAGAGGCCAG
ATGACATAGAATGCCGTCTTGACAGGACACCAAGCATAGACTTCAATGCT
GTCAAACAGAGTGGGGTGGAGTGTGATGTCAGCTCTGGTCTCCTGTGCCT
GTCCAGTGTTCAGCCAAGGTAAGGGAATGGACACCAAGTACATTGTACAT
GCATGCTGAGTCTATTGTTAATTTAGTTAGGTTATGGCGACCGAGGTTTG
TAGGAAAGTCACTGTGGTATTCCATATGTATGGCTGTATCTTTCGATAGC
TCGGTCACACCACAAGGAAATGTCACACAGTTTTAAAAATCTGGCAGAAT
CTTCCTAGATTCCCCAGGTTAGCTATATCTGTAGAGAACTCCTAAAGGAT
ACCACCATGTTTTTCATCATATTTAGAGAAATACAGACCATCAACTCATT
TGTCCAATCTACATCCACAACATTGAGAACTTTCCAAAAATAGACAGTGC
TTATTTGGAATCTGTGTCAACTGTATGCTGTCTTTCACAGGGAGTCTCCA
TACTGTTATGACTACTCCATACGAGTAAAGTGCTGTTCTCCGCCAGCCTA
CTGTACTACAACTCAGAGAACAACCACACCAACAACAACAGTTTCTACAA
CAACCCAGCTTACTACCACAGAGACAAGTACAACAGCTATGACTCCAACT
GGTTCCCCATCACCAACCCAACCACCCACTACAGAATCCACCACTGTTTC
CACAACAACCCAGCCTACCACTACAGAATCCACCACTGTTTCCACGACAA
CCCAGCCTACCACTACAGAATCCACCACTGTTTCCACGACAACCCAGCCT
ACCACTACAGAATCCACCACTGTTTCCACGACAACCCAGCCTACCACTAC
AGAATCCACCACTGTTTCCACGACAACCCAGCCTACCACTACAGAATCCA
CCACTGTTTCCACGACAACCCAGCCCACCACTACAGAATCCACCACTGTT
TCCACGACAACCCAGCCCACCACTACAGAATCCACCACTGTTTCCACGAC
AACCCAGCCCACCACTACAGAATCCACCACTGTTTCCACGACAACCCAGC
CCACCACTACAGAATCCACCACTGTTTCCACGACAACCCAGCCCACCACT
ACAGAATCCACCACTGTTTCCACGACAACCCAGCCCACCACTACAGAATC
CACCACTGTTTCCACGACAACCCAGCCCACCACTACAGAATCCACCACTG
TTTCCACGACAACCCAGCCCACCACTACAGAATCCACCACTGTTTCCACG
ACAACCCAGCCCACCACTACAGAATCCACCACTGTTTCCACGACAACCCA
GCCCACCACTACAGAATCCACCACTGTTTCCACGACAACCCAGCCCACCA
CTACAGAATCCACCACTGTTTCCACGACAACCCAGCCCACCACTACAGAA
TCCACCACTGTTTCCACGACAACCCAGCCCACCACTACAGAATCCACCAC
TGTTTCCACGACAACCCAGCCCACCACTACAGAATCCACCACTGTTTCCA
CGACAACCCAGCCCACCACTACAGAATCCACCACTGTTTCCACGACAACC
CAGCCCACCACTACAGAATCCACCACTGTTTCCACGACAACCCAG Coding sequence (CDS) from alignment at Sc0000465:119709..124153- >transcript:BL96373_cuf13 ID=transcript:BL96373_cuf13|Name=transcript:BL96373_cuf13|organism=Branchiostoma lanceolatum|type=CDS|length=3237bp|location=Sequence derived from alignment at Sc0000465:119709..124153- (Branchiostoma lanceolatum)
ACCACTGTTTCCACGACAACCCAGCCCACCACTACAGAATCCACCACTGT
TTCCACGACAACCCAGCCCACCACTACAGAATCCACCACTGTTTCCACGA
CAACCCAGCCCACCACTACAGAATCCACCACTGTTTCCACGACAACCCAG
CCCACCACTACAGAATCCACCACTGTTTCCACGACAACCCAGCCCACCAC
TACAGAATCCACCACTGTTTCCACGACAACCCAGCCCACCACTACAGAAT
CCACCACTGTTTCCACGACAACCCAGCCCACCACTACAGAATCCACCACT
GTTTCCACGACAACCCAGCCCACCACTACAGAAACTACTACTGTTTCCAC
AACAGCCCAGCCCACCACTACAGAATCTACCACTGTTTCCACGACAACCC
AGCCCACCACTACAGAAACTACCACTGTTTCCACAGCAGCCCAGTCCACC
ATCCCAACGTCCTGTGGGAAGGTTTGCAACTTTACAGACTGGATGAACTC
CTACAATCCCAGCACTGATATGCAGCTGAATGATGTGGAGAGTTTGGACA
ACCTTCGTAGCAGATTCAGCTTCTGTGAAACACCAATGGGCATCGAGTGT
CGATATGTTGAAAACCCCAGCCTGGACTTCAATGATCATCATCAGACTGG
GGTGACATGTCAGGTGGACACAGGCCTGTACTGTGACTCCAGCTTGACTA
GTATGAGGGCCTGCATGGACTATGAGGTGAGGTTCGAGTGTTGCCATGTG
CCTGACTCATGCAAAACAACTACCACCATGACAACAACAACAGCCCCAAC
CACCGCAGTGACAACGGAGAAACAACCACCAACAACCACTCCAGAATCTA
CCACTGTTTCCACGACAACAAAGCCCACCACCACTGTTTCCACAACAACT
CAGCCCACCACTCCAGAGGGCACCACTATTTCCATGACTACCACACCAAC
TACAACAGTTTCTACAACAACAGTGCTGACTACCACAGAGGCAACCACTT
CTATAACAACAAAAGGCACCACATCTATTCCTACACCTACAGGCTCACCA
TCGCCTTATCCAACAACCACTGTTTCCACAACCCCCATGACTACCAGCAC
ACATTCCACAACTCTGCTCCCCACAACTACCCCCATCCGACCCACCACAA
CTAAGATGACAACTACTCAGCCTACTACAACCAGGACGGAGACAACACAC
CTGGCAACGACTGAGGAATTCACAACACTACCGGGTCCTACAACAACTGA
GATGCAACCCACACAACCAACAACAACAAAACTGGAAACCACCCCAACGT
CCTGTGGGAAGGTTTGCAACTTTACAGACTGGATGAACTCCTACAATCCC
AGCACTGATATGCAGCTGAATGATGTGGAGAGCTTGGACAACCTTCGCAG
CAGATTCAGCTTCTGTGAAACACCAATGGGCATTGAGTGTCGATATGCTG
AAAATCCCAGCCTGGACTTCAATGATCATCATCAGACTGGGGTGACATGT
CAGGTGGACACAGGCCTGTACTGTGACTCCAGCTTGACTAGTATGAGGGC
CTGCATGGACTATGAGGTGAGGTTCGAGTGTTGCCATGTGCCTGACTCAT
GCAAAACAACTACCACCATGACAACAACAACAGCCCCAACCACCGCAGTG
ACAACGGAGAAACAACCACCAACAACCNCAACCACCGCAGTGACAACGGA
GAAACCACCACCAACAACCCCAACCTCCTCAGTGACAACGGAGGAACCGA
CAACAACAATAACCCCAACCACCACAGGGACAACGGAGGAACCAACAACA
AAGACAGCACCAACAACCACAGTGTCCACAACTACAGAGGGCACCACAAC
TATTTCTACAACACCACCTGTGAAGACTACCACTGAGTACTGCCAGGAGA
TTTGTGTTTGGTCAGAGTGGATGAACTCAGACTACCCTGGTGCTGGTGTC
CCCAATGACAATGAGACCTTTGCCCATCTGCGGGAAAGTTCCCTGGAGTT
CTGTGAGAGGCCAGATGACATAGAATGCCGTCTTGACAGGACACCAAGCA
TAGACTTCAATGCTGTCAAACAGAGTGGGGTGGAGTGTGATGTCAGCTCT
GGTCTCCTGTGCCTGTCCAGTGTTCAGCCAAGGGAGTCTCCATACTGTTA
TGACTACTCCATACGAGTAAAGTGCTGTTCTCCGCCAGCCTACTGTACTA
CAACTCAGAGAACAACCACACCAACAACAACAGTTTCTACAACAACCCAG
CTTACTACCACAGAGACAAGTACAACAGCTATGACTCCAACTGGTTCCCC
ATCACCAACCCAACCACCCACTACAGAATCCACCACTGTTTCCACAACAA
CCCAGCCTACCACTACAGAATCCACCACTGTTTCCACGACAACCCAGCCT
ACCACTACAGAATCCACCACTGTTTCCACGACAACCCAGCCTACCACTAC
AGAATCCACCACTGTTTCCACGACAACCCAGCCTACCACTACAGAATCCA
CCACTGTTTCCACGACAACCCAGCCTACCACTACAGAATCCACCACTGTT
TCCACGACAACCCAGCCCACCACTACAGAATCCACCACTGTTTCCACGAC
AACCCAGCCCACCACTACAGAATCCACCACTGTTTCCACGACAACCCAGC
CCACCACTACAGAATCCACCACTGTTTCCACGACAACCCAGCCCACCACT
ACAGAATCCACCACTGTTTCCACGACAACCCAGCCCACCACTACAGAATC
CACCACTGTTTCCACGACAACCCAGCCCACCACTACAGAATCCACCACTG
TTTCCACGACAACCCAGCCCACCACTACAGAATCCACCACTGTTTCCACG
ACAACCCAGCCCACCACTACAGAATCCACCACTGTTTCCACGACAACCCA
GCCCACCACTACAGAATCCACCACTGTTTCCACGACAACCCAGCCCACCA
CTACAGAATCCACCACTGTTTCCACGACAACCCAGCCCACCACTACAGAA
TCCACCACTGTTTCCACGACAACCCAGCCCACCACTACAGAATCCACCAC
TGTTTCCACGACAACCCAGCCCACCACTACAGAATCCACCACTGTTTCCA
CGACAACCCAGCCCACCACTACAGAATCCACCACTGTTTCCACGACAACC
CAGCCCACCACTACAGAATCCACCACTGTTTCCACGACAACCCAGCCCAC
CACTACAGAATCCACCACTGTTTCCACGACAACCCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000465 | genome | Sc0000465:119709..124153 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96373_cuf13 |
| Biotype | protein_coding |
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