transcript:BL96559_cuf2 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96559_cuf2
Unique Nametranscript:BL96559_cuf2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96559_cuf2

>transcript:BL96559_cuf2-protein ID=transcript:BL96559_cuf2-protein|Name=transcript:BL96559_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=508bp
GYCGQNGIALLDSTPFSSFRRVDKLHLGHTGCIPIDHVCDGVIDHPGILG
IHDETDCAQGLAHPCYGYHGWKCPGENTCLSVNRVCDSIPHCANGEDEKN
CDAHCESIGGWRCQCDQLTTCYLPEDICDGEETCYMYTTRTNEVTDELQC
ADDEANCEEYCRSTGGFFCTTTNECIELDRVCDGIPDCRYLVYEGFYMPH
DEEGCGNCTGVWEAMATYIAGHLADNEYDYPYANEEGVYGFTCNTGECTS
NFFFCDDRLTSFGCADLQDEQGCEDVRCLGRTCEETHKCGTFSLDTCDGV
PDCLDSTEEKNCASTSCVDTMLEFGIFKEIGVAQYCDWKEDCRTGTDESP
RKCAMFTDRLPCIRSNRFISRNHICDGMPDCVDASDEDACIGRGACILPM
PLIQEKYSIVEGIGTNTFIHSSHELTLAQWVVEGLDDWIEITLEDPVQLT
GVVVSGLRPSHTLTFSLKFGFWTDCLTSYTEGDNVKIFQTPTNGAGKGEH
FLAIAVQA
Run BLAST on NCBI

mRNA from alignment at Sc0000047:1652402..1656813+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96559_cuf2 ID=transcript:BL96559_cuf2|Name=transcript:BL96559_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=4412bp|location=Sequence derived from alignment at Sc0000047:1652402..1656813+ (Branchiostoma lanceolatum)
AGGTTACTGTGGGCAAAATGGAATAGCCCTCCTCGACAGCACTCCCTTCA GCAGCTTTCGACGAGTTGACAAACTGCATTTGGGTCATACTGGATGCATT CCAATAGATCACGTGTGCGATGGAGTCATCGACCACCCCGGGATCCTCGG CATTCATGATGAGACTGACTGTGCACAGGGTACCGTCAGAACTCGAGCTC TTGCACGCAATATTGTTTCGAGATATATATTTATGCGTATAAAGAAAATA TATTGCAACATATATATATATACATATCGCAATATTAAATTACATATATA CCTGTATAGTATTTACATAAGACGCAGCGATCTTTTATCACTACTACCGC TATGTTTTTTTCCTTCCTGTTAATGAATGGCAAATACTTGGCTTGAAGAA ACAATGCATTGTAATCCTTTTGGCTCTTTACAAAGGACCATTGGTAAGTA CTGAGATGCATTTTTTTTCAAATTGGTTAACATGTTTTATAACTCTTTAA CAATGGAGTGTAAATTACTCTGATATTGCAGGGCTGGCGCACCCCTGCTA TGGATATCACGGGTGGAAATGCCCAGGAGAGAATACCTGTTTGTCCGTGA ACCGTGTTTGTGATTCGATACCTCATTGCGCAAATGGAGAGGACGAAAAG AATTGTGGTTAGTATCGTTTTCTAGCATGTAGGTACTACTAGGTTCGTAA AAACTGCACACTGTGGAAAATAATTCTGATTGCACTCTCCATTTTGTTGT GATACAGACAAACTAATCTCAACAATTGCATAAAACACAGAGCTTACTTT CTTAGGTGTCGAACGATCGACGTTCAGCATTCTTGTAATATATGCATGAC ATAAGCAGATACACCATCCATGAGTCGCCACGGCAACCTGTGTGAGTCCT TGGATCATAATAAAGTCTGTAATGTATTGTGTTGCATAAGAAAACAAAGC AGAGGTCGGAAGACAAGGGTCGCCCAAATCGAGTAATACCTTGAGTTGGC AATACGTTTGGTATGCGGAAATACGTAGGTATGTGGAAAGTATCTTCCTC TTCCGACCTCTGTCTGGTTTATGTCCGGTCAGACTTAGACCACAACCAAG ATCTAGAATCTCAAACTTTCTCACGTTTTGCCATTTGTCTTGTCAAATTA CTTCAAACAGATGCACACTGCGAGTCCATTGGAGGATGGAGGTGTCAGTG CGATCAGCTCACAACATGCTACCTACCAGAGGATATTTGCGATGGCGAGG AGACATGTTACATGTACACGACAAGAACTAATGAAGTGACAGACGAATTA CAATGTGCTGATGACGAAGCAAACTGCGGTACACTTTACATTGATAAACA AAGAAACATGACTAAATCATTCCAGAATCTCCATTCTCTCTCTCGACGAG GATACAAAGCAATTCTTTTCGCCTTCATTGCACATCTTTTCTTGCTGTTT CTAATGATCAGCGTAACTGAGTTTTCTTTTGATTTGTCCTCGTCATTGCG ATTGATGGAGGAACAAATGAGGGGTTGCCACCCCATACATGCGGTTGTTA AAGTGATAGTTTACGCGTGTTCAGTACATACGTATACCGTCCTGCTTTAA GACGTTTTGGCCTTCCTAGCGCCATATGTATTATAATCATTGCAGTCTCC CCCTACATTACAGAGGAGTACTGCAGGTCTACCGGTGGCTTTTTTTGTAC AACAACCAATGAATGCATTGAACTGGATCGTGTTTGCGATGGGATTCCTG ACTGTAGATATTTGGTGTACGAAGGCTTCTACATGCCACATGATGAAGAG GGTTGTGGTAAAGAAATATTGTATCTATTGGTTTTGCCCACTCAAATTCA TAGCCATTTTCAAATTTATTACATTACTCCGTTGATGCAGTGACGTGCCT TGTAGTTTGCCTGTACCTATTCGAAGATCCTTGATATTAATTGAATTGTT AATCATAGCGATATTATCATTCCCTAATGACTGATAATGGTAAGAGCTCT ACAACTCATTACAATGTTTCCGTAATATCGATACATGATTGAAAATTAAA AATTTCACGACAGGTAACTGTACTGGGGTGTGGGAAGCCATGGCAACATA CATTGCAGGACATCTAGCTGACAATGAATATGACTACCCATACGCAAACG AAGAAGGTGTCTACGGCTTTACCTGCAACACAGGGGAGTGCACTTCAAAT TTCTTCTTCTGTGATGATAGACTGACGTCATTCGGATGCGCTGACTTGCA GGACGAGCAAGGCTGTGGTGATTTTTCGTATTCTTTTCATNTTCTTATTC TTTTCATAAACTTTGATTACGACAATGAATCACATTTATGCTGCATGCTA AAAATCGTCTTTCCGGGCTACAAAGAATTAACTCTATCATGGCCATAGGC CGATCTTCACTCATGGATGAGGCCTGGTTCCTATAGATATAAGTTTTCAA ATGCGAGTTGGCGTATGTTATTGTAAATCTACAATAGTGATGACGTATAC GTTTTGGTCAATCAGATTAGGAGAAATCACAGGCTATTGTCTTTCCATTC AAAGACATGATTTTCCATGTTTTTTTTTTTTGTGTGGTACCATAGTCAGC AATCTTTGTTTAAAGTTGCATGGAATCGATTCAATCATTGACAAGCTTCT CCTGTTCCTTTTCAGAGGATGTACGTTGCCTTGGTAGAACGTGTGAAGAA ACCCACAAGTGCGGTACATTTTCTCTTGACACCTGTGATGGAGTACCCGA TTGTTTGGATTCTACAGAGGAAAAGAACTGTGGTAGGTATTGATTACAAC TACTGCTGATATCATCCTCCGCAGTACCTCGTTCGTTTTCCCTTTCATAC TGAGCACTCAGCCTTCACAGGCATGTATTCAAGCGATGGTACACACCGAG AACACGTAGTATTCTCTTAGAATAAATCTTCATGAACGCAGAATCAACTG CAAATTGTTGAATTTCGTAAGAGAATGACAAAGAAAGGAGTCAAATATAA TCCTCCCCTAATCTACCAACTTCCTCACGACCACAGAACAAACGTAGAAA TACGCACACGCACACACTCAAATTAACACAGGAAAGAGTACGACGAAATG GTATTTATATTCAGATTTGACCCCACTGGGTTCTGCACTTTTTTGTATTA ATGACGCAGCATCAACCTCATGTGTGGATACGATGCTAGAATTCGGAATA TTCAAGGAAATCGGTGTCGCTCAATATTGTGATTGGAAAGAAGACTGCAG GACGGGCACAGACGAAAGTCCGAGGAAATGTGGTAAGCACATATATGTTT TACGCACATCCGAATTCCTATTGGTTTTCAACCGTTCCTTGTCTGTAACA ACCTTGAGCTAAAAGGGAAAGAACTAACTTACGAAAAAAACTAAATCACA TTTGTGTTTGTCGGCAGCTATGTTCACAGACCGACTACCGTGCATCCGGT CCAATCGCTTTATTTCAAGAAACCACATCTGTGACGGCATGCCGGATTGT GTGGATGCTTCAGACGAAGATGCCTGTATTGGTAAAGCAATCTTTTAAAA TCAGTACCGGAATAATTGCTCAGTAAAAACAACATGTGGATTGCAAAGGG ATAGAATTTACAAATGCATGTCACAAATCTGAGCTGTATCTAATTCAATC ATAATTCTAAGTATTCTCATCCATAAAAGTTTGCAAAGTAGCTAAACATT CAAATAGATAATGTTTGTGTTACGGGTCTGTATCTATGGATTTGCTGGTA ACTTGCATGTGCTACATTGCTTCAAAATCTGTAGGAATCATAATCTGCTT TCCGTAGGAAGGGGAGCTTGTATACTACCGATGCCATTAATTCAAGAGAA GTATTCAATCGTAGAAGGTATTGGTACAAATACGTTCATCCACAGTAGCC ATGAGCTCACCCTGGCACAATGGGTGGTAGAGGGACTTGATGACTGGATA GAAATAACCTTGGAAGACCCTGTGCAACTTACCGGAGTAGTTGTTTCTGG TTTAAGACCATCACATACGCTCACATTTTCGTTGAAGTTCGGGTTTTGGA CTGACTGTTTGACATCGTATACGGAAGGGGACAATGTAAAGGTATTTCAG TATCAATTACATTCTCGAAGCTTTCGACTTTTTTCATCCATTTTCTAAAT CCTTTGATTTTCTATTTTGCATTATATGTATGGGCATTATCGATAAGTAA CAGTATGCATCATTGCACAGGAAAGATGATACTAGCGACACGTACAATCA ATCAATCAATCAATCATCCGCAGACACAAATATGTAATATTCAGATACAA AAAAGGGTAAATCTTAGTTAAACTCATAATGTTAAACATGTTTAGATATT CCAAACACCTACCAATGGTGCTGGAAAAGGAGAGCATTTTCTGGCCATAG CAGTGCAAGCCA

Coding sequence (CDS) from alignment at Sc0000047:1652402..1656813+

>transcript:BL96559_cuf2 ID=transcript:BL96559_cuf2|Name=transcript:BL96559_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=15240bp|location=Sequence derived from alignment at Sc0000047:1652402..1656813+ (Branchiostoma lanceolatum)
GGTTACTGTGGGCAAAATGGAATAGCCCTCCTCGACAGCACTCCCTTCAG
CAGCTTTCGACGAGTTGACAAACTGCATTTGGGTCATACTGGATGCATTC
CAATAGATCACGTGTGCGATGGAGTCATCGACCACCCCGGGATCCTCGGC
ATTCATGATGAGACTGACTGTGCACAGGGGCTGGCGCACCCCTGCTATGG
ATATCACGGGTGGAAATGCCCAGGAGAGAATACCTGTTTGTCCGTGAACC
GTGTTTGTGATTCGATACCTCATTGCGCAAATGGAGAGGACGAAAAGAAT
TGTGATGCACACTGCGAGTCCATTGGAGGATGGAGGTGTCAGTGCGATCA
GCTCACAACATGCTACCTACCAGAGGATATTTGCGATGGCGAGGAGACAT
GTTACATGTACACGACAAGAACTAATGAAGTGACAGACGAATTACAATGT
GCTGATGACGAAGCAAACTGCGAGGAGTACTGCAGGTCTACCGGTGGCTT
TTTTTGTACAACAACCAATGAATGCATTGAACTGGATCGTGTTTGCGATG
GGATTCCTGACTGTAGATATTTGGTGTACGAAGGCTTCTACATGCCACAT
GATGAAGAGGGTTGTGGTAACTGTACTGGGGTGTGGGAAGCCATGGCAAC
ATACATTGCAGGACATCTAGCTGACAATGAATATGACTACCCATACGCAA
ACGAAGAAGGTGTCTACGGCTTTACCTGCAACACAGGGGAGTGCACTTCA
AATTTCTTCTTCTGTGATGATAGACTGACGTCATTCGGATGCGCTGACTT
GCAGGACGAGCAAGGCTGTGAGGATGTACGTTGCCTTGGTAGAACGTGTG
AAGAAACCCACAAGTGCGGTACATTTTCTCTTGACACCTGTGATGGAGTA
CCCGATTGTTTGGATTCTACAGAGGAAAAGAACTGTGCATCAACCTCATG
TGTGGATACGATGCTAGAATTCGGAATATTCAAGGAAATCGGTGTCGCTC
AATATTGTGATTGGAAAGAAGACTGCAGGACGGGCACAGACGAAAGTCCG
AGGAAATGTGCTATGTTCACAGACCGACTACCGTGCATCCGGTCCAATCG
CTTTATTTCAAGAAACCACATCTGTGACGGCATGCCGGATTGTGTGGATG
CTTCAGACGAAGATGCCTGTATTGGAAGGGGAGCTTGTATACTACCGATG
CCATTAATTCAAGAGAAGTATTCAATCGTAGAAGGTATTGGTACAAATAC
GTTCATCCACAGTAGCCATGAGCTCACCCTGGCACAATGGGTGGTAGAGG
GACTTGATGACTGGATAGAAATAACCTTGGAAGACCCTGTGCAACTTACC
GGAGTAGTTGTTTCTGGTTTAAGACCATCACATACGCTCACATTTTCGTT
GAAGTTCGGGTTTTGGACTGACTGTTTGACATCGTATACGGAAGGGGACA
ATGTAAAGATATTCCAAACACCTACCAATGGTGCTGGAAAAGGAGAGCAT
TTTCTGGCCATAGCAGTGCAAGCCGGTTACTGTGGGCAAAATGGAATAGC
CCTCCTCGACAGCACTCCCTTCAGCAGCTTTCGACGAGTTGACAAACTGC
ATTTGGGTCATACTGGATGCATTCCAATAGATCACGTGTGCGATGGAGTC
ATCGACCACCCCGGGATCCTCGGCATTCATGATGAGACTGACTGTGCACA
GGGGCTGGCGCACCCCTGCTATGGATATCACGGGTGGAAATGCCCAGGAG
AGAATACCTGTTTGTCCGTGAACCGTGTTTGTGATTCGATACCTCATTGC
GCAAATGGAGAGGACGAAAAGAATTGTGATGCACACTGCGAGTCCATTGG
AGGATGGAGGTGTCAGTGCGATCAGCTCACAACATGCTACCTACCAGAGG
ATATTTGCGATGGCGAGGAGACATGTTACATGTACACGACAAGAACTAAT
GAAGTGACAGACGAATTACAATGTGCTGATGACGAAGCAAACTGCGAGGA
GTACTGCAGGTCTACCGGTGGCTTTTTTTGTACAACAACCAATGAATGCA
TTGAACTGGATCGTGTTTGCGATGGGATTCCTGACTGTAGATATTTGGTG
TACGAAGGCTTCTACATGCCACATGATGAAGAGGGTTGTGGTAACTGTAC
TGGGGTGTGGGAAGCCATGGCAACATACATTGCAGGACATCTAGCTGACA
ATGAATATGACTACCCATACGCAAACGAAGAAGGTGTCTACGGCTTTACC
TGCAACACAGGGGAGTGCACTTCAAATTTCTTCTTCTGTGATGATAGACT
GACGTCATTCGGATGCGCTGACTTGCAGGACGAGCAAGGCTGTGAGGATG
TACGTTGCCTTGGTAGAACGTGTGAAGAAACCCACAAGTGCGGTACATTT
TCTCTTGACACCTGTGATGGAGTACCCGATTGTTTGGATTCTACAGAGGA
AAAGAACTGTGCATCAACCTCATGTGTGGATACGATGCTAGAATTCGGAA
TATTCAAGGAAATCGGTGTCGCTCAATATTGTGATTGGAAAGAAGACTGC
AGGACGGGCACAGACGAAAGTCCGAGGAAATGTGCTATGTTCACAGACCG
ACTACCGTGCATCCGGTCCAATCGCTTTATTTCAAGAAACCACATCTGTG
ACGGCATGCCGGATTGTGTGGATGCTTCAGACGAAGATGCCTGTATTGGA
AGGGGAGCTTGTATACTACCGATGCCATTAATTCAAGAGAAGTATTCAAT
CGTAGAAGGTATTGGTACAAATACGTTCATCCACAGTAGCCATGAGCTCA
CCCTGGCACAATGGGTGGTAGAGGGACTTGATGACTGGATAGAAATAACC
TTGGAAGACCCTGTGCAACTTACCGGAGTAGTTGTTTCTGGTTTAAGACC
ATCACATACGCTCACATTTTCGTTGAAGTTCGGGTTTTGGACTGACTGTT
TGACATCGTATACGGAAGGGGACAATGTAAAGATATTCCAAACACCTACC
AATGGTGCTGGAAAAGGAGAGCATTTTCTGGCCATAGCAGTGCAAGCCGG
TTACTGTGGGCAAAATGGAATAGCCCTCCTCGACAGCACTCCCTTCAGCA
GCTTTCGACGAGTTGACAAACTGCATTTGGGTCATACTGGATGCATTCCA
ATAGATCACGTGTGCGATGGAGTCATCGACCACCCCGGGATCCTCGGCAT
TCATGATGAGACTGACTGTGCACAGGGGCTGGCGCACCCCTGCTATGGAT
ATCACGGGTGGAAATGCCCAGGAGAGAATACCTGTTTGTCCGTGAACCGT
GTTTGTGATTCGATACCTCATTGCGCAAATGGAGAGGACGAAAAGAATTG
TGATGCACACTGCGAGTCCATTGGAGGATGGAGGTGTCAGTGCGATCAGC
TCACAACATGCTACCTACCAGAGGATATTTGCGATGGCGAGGAGACATGT
TACATGTACACGACAAGAACTAATGAAGTGACAGACGAATTACAATGTGC
TGATGACGAAGCAAACTGCGAGGAGTACTGCAGGTCTACCGGTGGCTTTT
TTTGTACAACAACCAATGAATGCATTGAACTGGATCGTGTTTGCGATGGG
ATTCCTGACTGTAGATATTTGGTGTACGAAGGCTTCTACATGCCACATGA
TGAAGAGGGTTGTGGTAACTGTACTGGGGTGTGGGAAGCCATGGCAACAT
ACATTGCAGGACATCTAGCTGACAATGAATATGACTACCCATACGCAAAC
GAAGAAGGTGTCTACGGCTTTACCTGCAACACAGGGGAGTGCACTTCAAA
TTTCTTCTTCTGTGATGATAGACTGACGTCATTCGGATGCGCTGACTTGC
AGGACGAGCAAGGCTGTGAGGATGTACGTTGCCTTGGTAGAACGTGTGAA
GAAACCCACAAGTGCGGTACATTTTCTCTTGACACCTGTGATGGAGTACC
CGATTGTTTGGATTCTACAGAGGAAAAGAACTGTGCATCAACCTCATGTG
TGGATACGATGCTAGAATTCGGAATATTCAAGGAAATCGGTGTCGCTCAA
TATTGTGATTGGAAAGAAGACTGCAGGACGGGCACAGACGAAAGTCCGAG
GAAATGTGCTATGTTCACAGACCGACTACCGTGCATCCGGTCCAATCGCT
TTATTTCAAGAAACCACATCTGTGACGGCATGCCGGATTGTGTGGATGCT
TCAGACGAAGATGCCTGTATTGGAAGGGGAGCTTGTATACTACCGATGCC
ATTAATTCAAGAGAAGTATTCAATCGTAGAAGGTATTGGTACAAATACGT
TCATCCACAGTAGCCATGAGCTCACCCTGGCACAATGGGTGGTAGAGGGA
CTTGATGACTGGATAGAAATAACCTTGGAAGACCCTGTGCAACTTACCGG
AGTAGTTGTTTCTGGTTTAAGACCATCACATACGCTCACATTTTCGTTGA
AGTTCGGGTTTTGGACTGACTGTTTGACATCGTATACGGAAGGGGACAAT
GTAAAGATATTCCAAACACCTACCAATGGTGCTGGAAAAGGAGAGCATTT
TCTGGCCATAGCAGTGCAAGCCGGTTACTGTGGGCAAAATGGAATAGCCC
TCCTCGACAGCACTCCCTTCAGCAGCTTTCGACGAGTTGACAAACTGCAT
TTGGGTCATACTGGATGCATTCCAATAGATCACGTGTGCGATGGAGTCAT
CGACCACCCCGGGATCCTCGGCATTCATGATGAGACTGACTGTGCACAGG
GGCTGGCGCACCCCTGCTATGGATATCACGGGTGGAAATGCCCAGGAGAG
AATACCTGTTTGTCCGTGAACCGTGTTTGTGATTCGATACCTCATTGCGC
AAATGGAGAGGACGAAAAGAATTGTGATGCACACTGCGAGTCCATTGGAG
GATGGAGGTGTCAGTGCGATCAGCTCACAACATGCTACCTACCAGAGGAT
ATTTGCGATGGCGAGGAGACATGTTACATGTACACGACAAGAACTAATGA
AGTGACAGACGAATTACAATGTGCTGATGACGAAGCAAACTGCGAGGAGT
ACTGCAGGTCTACCGGTGGCTTTTTTTGTACAACAACCAATGAATGCATT
GAACTGGATCGTGTTTGCGATGGGATTCCTGACTGTAGATATTTGGTGTA
CGAAGGCTTCTACATGCCACATGATGAAGAGGGTTGTGGTAACTGTACTG
GGGTGTGGGAAGCCATGGCAACATACATTGCAGGACATCTAGCTGACAAT
GAATATGACTACCCATACGCAAACGAAGAAGGTGTCTACGGCTTTACCTG
CAACACAGGGGAGTGCACTTCAAATTTCTTCTTCTGTGATGATAGACTGA
CGTCATTCGGATGCGCTGACTTGCAGGACGAGCAAGGCTGTGAGGATGTA
CGTTGCCTTGGTAGAACGTGTGAAGAAACCCACAAGTGCGGTACATTTTC
TCTTGACACCTGTGATGGAGTACCCGATTGTTTGGATTCTACAGAGGAAA
AGAACTGTGCATCAACCTCATGTGTGGATACGATGCTAGAATTCGGAATA
TTCAAGGAAATCGGTGTCGCTCAATATTGTGATTGGAAAGAAGACTGCAG
GACGGGCACAGACGAAAGTCCGAGGAAATGTGCTATGTTCACAGACCGAC
TACCGTGCATCCGGTCCAATCGCTTTATTTCAAGAAACCACATCTGTGAC
GGCATGCCGGATTGTGTGGATGCTTCAGACGAAGATGCCTGTATTGGAAG
GGGAGCTTGTATACTACCGATGCCATTAATTCAAGAGAAGTATTCAATCG
TAGAAGGTATTGGTACAAATACGTTCATCCACAGTAGCCATGAGCTCACC
CTGGCACAATGGGTGGTAGAGGGACTTGATGACTGGATAGAAATAACCTT
GGAAGACCCTGTGCAACTTACCGGAGTAGTTGTTTCTGGTTTAAGACCAT
CACATACGCTCACATTTTCGTTGAAGTTCGGGTTTTGGACTGACTGTTTG
ACATCGTATACGGAAGGGGACAATGTAAAGATATTCCAAACACCTACCAA
TGGTGCTGGAAAAGGAGAGCATTTTCTGGCCATAGCAGTGCAAGCCGGTT
ACTGTGGGCAAAATGGAATAGCCCTCCTCGACAGCACTCCCTTCAGCAGC
TTTCGACGAGTTGACAAACTGCATTTGGGTCATACTGGATGCATTCCAAT
AGATCACGTGTGCGATGGAGTCATCGACCACCCCGGGATCCTCGGCATTC
ATGATGAGACTGACTGTGCACAGGGGCTGGCGCACCCCTGCTATGGATAT
CACGGGTGGAAATGCCCAGGAGAGAATACCTGTTTGTCCGTGAACCGTGT
TTGTGATTCGATACCTCATTGCGCAAATGGAGAGGACGAAAAGAATTGTG
ATGCACACTGCGAGTCCATTGGAGGATGGAGGTGTCAGTGCGATCAGCTC
ACAACATGCTACCTACCAGAGGATATTTGCGATGGCGAGGAGACATGTTA
CATGTACACGACAAGAACTAATGAAGTGACAGACGAATTACAATGTGCTG
ATGACGAAGCAAACTGCGAGGAGTACTGCAGGTCTACCGGTGGCTTTTTT
TGTACAACAACCAATGAATGCATTGAACTGGATCGTGTTTGCGATGGGAT
TCCTGACTGTAGATATTTGGTGTACGAAGGCTTCTACATGCCACATGATG
AAGAGGGTTGTGGTAACTGTACTGGGGTGTGGGAAGCCATGGCAACATAC
ATTGCAGGACATCTAGCTGACAATGAATATGACTACCCATACGCAAACGA
AGAAGGTGTCTACGGCTTTACCTGCAACACAGGGGAGTGCACTTCAAATT
TCTTCTTCTGTGATGATAGACTGACGTCATTCGGATGCGCTGACTTGCAG
GACGAGCAAGGCTGTGAGGATGTACGTTGCCTTGGTAGAACGTGTGAAGA
AACCCACAAGTGCGGTACATTTTCTCTTGACACCTGTGATGGAGTACCCG
ATTGTTTGGATTCTACAGAGGAAAAGAACTGTGCATCAACCTCATGTGTG
GATACGATGCTAGAATTCGGAATATTCAAGGAAATCGGTGTCGCTCAATA
TTGTGATTGGAAAGAAGACTGCAGGACGGGCACAGACGAAAGTCCGAGGA
AATGTGCTATGTTCACAGACCGACTACCGTGCATCCGGTCCAATCGCTTT
ATTTCAAGAAACCACATCTGTGACGGCATGCCGGATTGTGTGGATGCTTC
AGACGAAGATGCCTGTATTGGAAGGGGAGCTTGTATACTACCGATGCCAT
TAATTCAAGAGAAGTATTCAATCGTAGAAGGTATTGGTACAAATACGTTC
ATCCACAGTAGCCATGAGCTCACCCTGGCACAATGGGTGGTAGAGGGACT
TGATGACTGGATAGAAATAACCTTGGAAGACCCTGTGCAACTTACCGGAG
TAGTTGTTTCTGGTTTAAGACCATCACATACGCTCACATTTTCGTTGAAG
TTCGGGTTTTGGACTGACTGTTTGACATCGTATACGGAAGGGGACAATGT
AAAGATATTCCAAACACCTACCAATGGTGCTGGAAAAGGAGAGCATTTTC
TGGCCATAGCAGTGCAAGCCGGTTACTGTGGGCAAAATGGAATAGCCCTC
CTCGACAGCACTCCCTTCAGCAGCTTTCGACGAGTTGACAAACTGCATTT
GGGTCATACTGGATGCATTCCAATAGATCACGTGTGCGATGGAGTCATCG
ACCACCCCGGGATCCTCGGCATTCATGATGAGACTGACTGTGCACAGGGG
CTGGCGCACCCCTGCTATGGATATCACGGGTGGAAATGCCCAGGAGAGAA
TACCTGTTTGTCCGTGAACCGTGTTTGTGATTCGATACCTCATTGCGCAA
ATGGAGAGGACGAAAAGAATTGTGATGCACACTGCGAGTCCATTGGAGGA
TGGAGGTGTCAGTGCGATCAGCTCACAACATGCTACCTACCAGAGGATAT
TTGCGATGGCGAGGAGACATGTTACATGTACACGACAAGAACTAATGAAG
TGACAGACGAATTACAATGTGCTGATGACGAAGCAAACTGCGAGGAGTAC
TGCAGGTCTACCGGTGGCTTTTTTTGTACAACAACCAATGAATGCATTGA
ACTGGATCGTGTTTGCGATGGGATTCCTGACTGTAGATATTTGGTGTACG
AAGGCTTCTACATGCCACATGATGAAGAGGGTTGTGGTAACTGTACTGGG
GTGTGGGAAGCCATGGCAACATACATTGCAGGACATCTAGCTGACAATGA
ATATGACTACCCATACGCAAACGAAGAAGGTGTCTACGGCTTTACCTGCA
ACACAGGGGAGTGCACTTCAAATTTCTTCTTCTGTGATGATAGACTGACG
TCATTCGGATGCGCTGACTTGCAGGACGAGCAAGGCTGTGAGGATGTACG
TTGCCTTGGTAGAACGTGTGAAGAAACCCACAAGTGCGGTACATTTTCTC
TTGACACCTGTGATGGAGTACCCGATTGTTTGGATTCTACAGAGGAAAAG
AACTGTGCATCAACCTCATGTGTGGATACGATGCTAGAATTCGGAATATT
CAAGGAAATCGGTGTCGCTCAATATTGTGATTGGAAAGAAGACTGCAGGA
CGGGCACAGACGAAAGTCCGAGGAAATGTGCTATGTTCACAGACCGACTA
CCGTGCATCCGGTCCAATCGCTTTATTTCAAGAAACCACATCTGTGACGG
CATGCCGGATTGTGTGGATGCTTCAGACGAAGATGCCTGTATTGGAAGGG
GAGCTTGTATACTACCGATGCCATTAATTCAAGAGAAGTATTCAATCGTA
GAAGGTATTGGTACAAATACGTTCATCCACAGTAGCCATGAGCTCACCCT
GGCACAATGGGTGGTAGAGGGACTTGATGACTGGATAGAAATAACCTTGG
AAGACCCTGTGCAACTTACCGGAGTAGTTGTTTCTGGTTTAAGACCATCA
CATACGCTCACATTTTCGTTGAAGTTCGGGTTTTGGACTGACTGTTTGAC
ATCGTATACGGAAGGGGACAATGTAAAGATATTCCAAACACCTACCAATG
GTGCTGGAAAAGGAGAGCATTTTCTGGCCATAGCAGTGCAAGCCGGTTAC
TGTGGGCAAAATGGAATAGCCCTCCTCGACAGCACTCCCTTCAGCAGCTT
TCGACGAGTTGACAAACTGCATTTGGGTCATACTGGATGCATTCCAATAG
ATCACGTGTGCGATGGAGTCATCGACCACCCCGGGATCCTCGGCATTCAT
GATGAGACTGACTGTGCACAGGGGCTGGCGCACCCCTGCTATGGATATCA
CGGGTGGAAATGCCCAGGAGAGAATACCTGTTTGTCCGTGAACCGTGTTT
GTGATTCGATACCTCATTGCGCAAATGGAGAGGACGAAAAGAATTGTGAT
GCACACTGCGAGTCCATTGGAGGATGGAGGTGTCAGTGCGATCAGCTCAC
AACATGCTACCTACCAGAGGATATTTGCGATGGCGAGGAGACATGTTACA
TGTACACGACAAGAACTAATGAAGTGACAGACGAATTACAATGTGCTGAT
GACGAAGCAAACTGCGAGGAGTACTGCAGGTCTACCGGTGGCTTTTTTTG
TACAACAACCAATGAATGCATTGAACTGGATCGTGTTTGCGATGGGATTC
CTGACTGTAGATATTTGGTGTACGAAGGCTTCTACATGCCACATGATGAA
GAGGGTTGTGGTAACTGTACTGGGGTGTGGGAAGCCATGGCAACATACAT
TGCAGGACATCTAGCTGACAATGAATATGACTACCCATACGCAAACGAAG
AAGGTGTCTACGGCTTTACCTGCAACACAGGGGAGTGCACTTCAAATTTC
TTCTTCTGTGATGATAGACTGACGTCATTCGGATGCGCTGACTTGCAGGA
CGAGCAAGGCTGTGAGGATGTACGTTGCCTTGGTAGAACGTGTGAAGAAA
CCCACAAGTGCGGTACATTTTCTCTTGACACCTGTGATGGAGTACCCGAT
TGTTTGGATTCTACAGAGGAAAAGAACTGTGCATCAACCTCATGTGTGGA
TACGATGCTAGAATTCGGAATATTCAAGGAAATCGGTGTCGCTCAATATT
GTGATTGGAAAGAAGACTGCAGGACGGGCACAGACGAAAGTCCGAGGAAA
TGTGCTATGTTCACAGACCGACTACCGTGCATCCGGTCCAATCGCTTTAT
TTCAAGAAACCACATCTGTGACGGCATGCCGGATTGTGTGGATGCTTCAG
ACGAAGATGCCTGTATTGGAAGGGGAGCTTGTATACTACCGATGCCATTA
ATTCAAGAGAAGTATTCAATCGTAGAAGGTATTGGTACAAATACGTTCAT
CCACAGTAGCCATGAGCTCACCCTGGCACAATGGGTGGTAGAGGGACTTG
ATGACTGGATAGAAATAACCTTGGAAGACCCTGTGCAACTTACCGGAGTA
GTTGTTTCTGGTTTAAGACCATCACATACGCTCACATTTTCGTTGAAGTT
CGGGTTTTGGACTGACTGTTTGACATCGTATACGGAAGGGGACAATGTAA
AGATATTCCAAACACCTACCAATGGTGCTGGAAAAGGAGAGCATTTTCTG
GCCATAGCAGTGCAAGCCGGTTACTGTGGGCAAAATGGAATAGCCCTCCT
CGACAGCACTCCCTTCAGCAGCTTTCGACGAGTTGACAAACTGCATTTGG
GTCATACTGGATGCATTCCAATAGATCACGTGTGCGATGGAGTCATCGAC
CACCCCGGGATCCTCGGCATTCATGATGAGACTGACTGTGCACAGGGGCT
GGCGCACCCCTGCTATGGATATCACGGGTGGAAATGCCCAGGAGAGAATA
CCTGTTTGTCCGTGAACCGTGTTTGTGATTCGATACCTCATTGCGCAAAT
GGAGAGGACGAAAAGAATTGTGATGCACACTGCGAGTCCATTGGAGGATG
GAGGTGTCAGTGCGATCAGCTCACAACATGCTACCTACCAGAGGATATTT
GCGATGGCGAGGAGACATGTTACATGTACACGACAAGAACTAATGAAGTG
ACAGACGAATTACAATGTGCTGATGACGAAGCAAACTGCGAGGAGTACTG
CAGGTCTACCGGTGGCTTTTTTTGTACAACAACCAATGAATGCATTGAAC
TGGATCGTGTTTGCGATGGGATTCCTGACTGTAGATATTTGGTGTACGAA
GGCTTCTACATGCCACATGATGAAGAGGGTTGTGGTAACTGTACTGGGGT
GTGGGAAGCCATGGCAACATACATTGCAGGACATCTAGCTGACAATGAAT
ATGACTACCCATACGCAAACGAAGAAGGTGTCTACGGCTTTACCTGCAAC
ACAGGGGAGTGCACTTCAAATTTCTTCTTCTGTGATGATAGACTGACGTC
ATTCGGATGCGCTGACTTGCAGGACGAGCAAGGCTGTGAGGATGTACGTT
GCCTTGGTAGAACGTGTGAAGAAACCCACAAGTGCGGTACATTTTCTCTT
GACACCTGTGATGGAGTACCCGATTGTTTGGATTCTACAGAGGAAAAGAA
CTGTGCATCAACCTCATGTGTGGATACGATGCTAGAATTCGGAATATTCA
AGGAAATCGGTGTCGCTCAATATTGTGATTGGAAAGAAGACTGCAGGACG
GGCACAGACGAAAGTCCGAGGAAATGTGCTATGTTCACAGACCGACTACC
GTGCATCCGGTCCAATCGCTTTATTTCAAGAAACCACATCTGTGACGGCA
TGCCGGATTGTGTGGATGCTTCAGACGAAGATGCCTGTATTGGAAGGGGA
GCTTGTATACTACCGATGCCATTAATTCAAGAGAAGTATTCAATCGTAGA
AGGTATTGGTACAAATACGTTCATCCACAGTAGCCATGAGCTCACCCTGG
CACAATGGGTGGTAGAGGGACTTGATGACTGGATAGAAATAACCTTGGAA
GACCCTGTGCAACTTACCGGAGTAGTTGTTTCTGGTTTAAGACCATCACA
TACGCTCACATTTTCGTTGAAGTTCGGGTTTTGGACTGACTGTTTGACAT
CGTATACGGAAGGGGACAATGTAAAGATATTCCAAACACCTACCAATGGT
GCTGGAAAAGGAGAGCATTTTCTGGCCATAGCAGTGCAAGCCGGTTACTG
TGGGCAAAATGGAATAGCCCTCCTCGACAGCACTCCCTTCAGCAGCTTTC
GACGAGTTGACAAACTGCATTTGGGTCATACTGGATGCATTCCAATAGAT
CACGTGTGCGATGGAGTCATCGACCACCCCGGGATCCTCGGCATTCATGA
TGAGACTGACTGTGCACAGGGGCTGGCGCACCCCTGCTATGGATATCACG
GGTGGAAATGCCCAGGAGAGAATACCTGTTTGTCCGTGAACCGTGTTTGT
GATTCGATACCTCATTGCGCAAATGGAGAGGACGAAAAGAATTGTGATGC
ACACTGCGAGTCCATTGGAGGATGGAGGTGTCAGTGCGATCAGCTCACAA
CATGCTACCTACCAGAGGATATTTGCGATGGCGAGGAGACATGTTACATG
TACACGACAAGAACTAATGAAGTGACAGACGAATTACAATGTGCTGATGA
CGAAGCAAACTGCGAGGAGTACTGCAGGTCTACCGGTGGCTTTTTTTGTA
CAACAACCAATGAATGCATTGAACTGGATCGTGTTTGCGATGGGATTCCT
GACTGTAGATATTTGGTGTACGAAGGCTTCTACATGCCACATGATGAAGA
GGGTTGTGGTAACTGTACTGGGGTGTGGGAAGCCATGGCAACATACATTG
CAGGACATCTAGCTGACAATGAATATGACTACCCATACGCAAACGAAGAA
GGTGTCTACGGCTTTACCTGCAACACAGGGGAGTGCACTTCAAATTTCTT
CTTCTGTGATGATAGACTGACGTCATTCGGATGCGCTGACTTGCAGGACG
AGCAAGGCTGTGAGGATGTACGTTGCCTTGGTAGAACGTGTGAAGAAACC
CACAAGTGCGGTACATTTTCTCTTGACACCTGTGATGGAGTACCCGATTG
TTTGGATTCTACAGAGGAAAAGAACTGTGCATCAACCTCATGTGTGGATA
CGATGCTAGAATTCGGAATATTCAAGGAAATCGGTGTCGCTCAATATTGT
GATTGGAAAGAAGACTGCAGGACGGGCACAGACGAAAGTCCGAGGAAATG
TGCTATGTTCACAGACCGACTACCGTGCATCCGGTCCAATCGCTTTATTT
CAAGAAACCACATCTGTGACGGCATGCCGGATTGTGTGGATGCTTCAGAC
GAAGATGCCTGTATTGGAAGGGGAGCTTGTATACTACCGATGCCATTAAT
TCAAGAGAAGTATTCAATCGTAGAAGGTATTGGTACAAATACGTTCATCC
ACAGTAGCCATGAGCTCACCCTGGCACAATGGGTGGTAGAGGGACTTGAT
GACTGGATAGAAATAACCTTGGAAGACCCTGTGCAACTTACCGGAGTAGT
TGTTTCTGGTTTAAGACCATCACATACGCTCACATTTTCGTTGAAGTTCG
GGTTTTGGACTGACTGTTTGACATCGTATACGGAAGGGGACAATGTAAAG
ATATTCCAAACACCTACCAATGGTGCTGGAAAAGGAGAGCATTTTCTGGC
CATAGCAGTGCAAGCCGGTTACTGTGGGCAAAATGGAATAGCCCTCCTCG
ACAGCACTCCCTTCAGCAGCTTTCGACGAGTTGACAAACTGCATTTGGGT
CATACTGGATGCATTCCAATAGATCACGTGTGCGATGGAGTCATCGACCA
CCCCGGGATCCTCGGCATTCATGATGAGACTGACTGTGCACAGGGGCTGG
CGCACCCCTGCTATGGATATCACGGGTGGAAATGCCCAGGAGAGAATACC
TGTTTGTCCGTGAACCGTGTTTGTGATTCGATACCTCATTGCGCAAATGG
AGAGGACGAAAAGAATTGTGATGCACACTGCGAGTCCATTGGAGGATGGA
GGTGTCAGTGCGATCAGCTCACAACATGCTACCTACCAGAGGATATTTGC
GATGGCGAGGAGACATGTTACATGTACACGACAAGAACTAATGAAGTGAC
AGACGAATTACAATGTGCTGATGACGAAGCAAACTGCGAGGAGTACTGCA
GGTCTACCGGTGGCTTTTTTTGTACAACAACCAATGAATGCATTGAACTG
GATCGTGTTTGCGATGGGATTCCTGACTGTAGATATTTGGTGTACGAAGG
CTTCTACATGCCACATGATGAAGAGGGTTGTGGTAACTGTACTGGGGTGT
GGGAAGCCATGGCAACATACATTGCAGGACATCTAGCTGACAATGAATAT
GACTACCCATACGCAAACGAAGAAGGTGTCTACGGCTTTACCTGCAACAC
AGGGGAGTGCACTTCAAATTTCTTCTTCTGTGATGATAGACTGACGTCAT
TCGGATGCGCTGACTTGCAGGACGAGCAAGGCTGTGAGGATGTACGTTGC
CTTGGTAGAACGTGTGAAGAAACCCACAAGTGCGGTACATTTTCTCTTGA
CACCTGTGATGGAGTACCCGATTGTTTGGATTCTACAGAGGAAAAGAACT
GTGCATCAACCTCATGTGTGGATACGATGCTAGAATTCGGAATATTCAAG
GAAATCGGTGTCGCTCAATATTGTGATTGGAAAGAAGACTGCAGGACGGG
CACAGACGAAAGTCCGAGGAAATGTGCTATGTTCACAGACCGACTACCGT
GCATCCGGTCCAATCGCTTTATTTCAAGAAACCACATCTGTGACGGCATG
CCGGATTGTGTGGATGCTTCAGACGAAGATGCCTGTATTGGAAGGGGAGC
TTGTATACTACCGATGCCATTAATTCAAGAGAAGTATTCAATCGTAGAAG
GTATTGGTACAAATACGTTCATCCACAGTAGCCATGAGCTCACCCTGGCA
CAATGGGTGGTAGAGGGACTTGATGACTGGATAGAAATAACCTTGGAAGA
CCCTGTGCAACTTACCGGAGTAGTTGTTTCTGGTTTAAGACCATCACATA
CGCTCACATTTTCGTTGAAGTTCGGGTTTTGGACTGACTGTTTGACATCG
TATACGGAAGGGGACAATGTAAAGATATTCCAAACACCTACCAATGGTGC
TGGAAAAGGAGAGCATTTTCTGGCCATAGCAGTGCAAGCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96559gene:BL96559Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96559_cuf2transcript:BL96559_cuf2-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96559_cuf2-E1BL96559_cuf2-E1-1564476830-219559Branchiostoma lanceolatumexon
BL96559_cuf2-E2BL96559_cuf2-E2-1564476830-219561Branchiostoma lanceolatumexon
BL96559_cuf2-E3BL96559_cuf2-E3-1564476830-219563Branchiostoma lanceolatumexon
BL96559_cuf2-E4BL96559_cuf2-E4-1564476830-219565Branchiostoma lanceolatumexon
BL96559_cuf2-E5BL96559_cuf2-E5-1564476830-219567Branchiostoma lanceolatumexon
BL96559_cuf2-E6BL96559_cuf2-E6-1564476830-219569Branchiostoma lanceolatumexon
BL96559_cuf2-E7BL96559_cuf2-E7-1564476830-219571Branchiostoma lanceolatumexon
BL96559_cuf2-E8BL96559_cuf2-E8-1564476830-219573Branchiostoma lanceolatumexon
BL96559_cuf2-E9BL96559_cuf2-E9-1564476830-219575Branchiostoma lanceolatumexon
BL96559_cuf2-E10BL96559_cuf2-E10-1564476830-219578Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000047genomeSc0000047:1652402..1656813 +
Properties
Property NameValue
Transcript idBL96559_cuf2
Biotypeprotein_coding