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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96778_cuf9 >transcript:BL96778_cuf9-protein ID=transcript:BL96778_cuf9-protein|Name=transcript:BL96778_cuf9|organism=Branchiostoma lanceolatum|type=polypeptide|length=236bp
DGDDGDTISYSLSGTNNDHFAVDSSTGAVTTARVLERDGADGVSAYTLVL
TATDTADNTGTATLSVTVNDVNDNSATCDPDVYYSTVEENTAAAAPVALL
SCTDPDDGVNSDLAFSIVSGDDTAAKFDIDADTGQITTSSTAVDYDTDAM
ETAGFRYVLYVSVTDQAADVSDRLTSTATVVVAVTSTNDNAPTFTSFASS
VAVDEDASVGTTILSELSATDADKGADGVVSFSMIA Run BLAST on NCBI mRNA from alignment at Sc0000124:485017..486596- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96778_cuf9 ID=transcript:BL96778_cuf9|Name=transcript:BL96778_cuf9|organism=Branchiostoma lanceolatum|type=mRNA|length=1580bp|location=Sequence derived from alignment at Sc0000124:485017..486596- (Branchiostoma lanceolatum)
CAGATGGAGACGACGGGGACACCATCTCATATTCCCTCTCAGGTGAGGCG
TTTTAAGCCACGGTTACACATACATCTAGCCGAATATGGCTTCTGACCAC
CAGCTAACCAAGGTTATTGGTAGGTAGGGAAAAGTCTGACCAGCTTTAGA
TTAAACAAATCTAACTCCTAAACACACCCTGACATTTCTAAAACATTTTG
TCCTCTTCTCACCAATGCAGGGACGAACAATGACCACTTCGCCGTTGACA
GCAGCACGGGTGCCGTGACCACCGCCAGGGTGCTGGAGCGGGACGGGGCG
GACGGCGTGTCGGCCTACACGCTCGTTCTCACCGCCACGGACACCGCCGA
TAACACGGGCACCGCCACGCTCTCCGTCACGGTCAACGACGTGAACGATA
ACAGCGCCACTTGCGATCCTGACGTGTACTACAGCACAGTGGAGGAGAAT
ACTGCAGCAGGTTGGGAACGCACTGATCTCCAAGTAGATGTGTAGATGAT
GTGTAGATGGTGTCGGGTTGTTTGGGGCATCTTTCTGTTCCCTCCTGCCT
TCTTGAATGACACCTAAGACACTTGGCTAAAAGAAGAAGGTCGCAATTAC
ATAAAGATGCCCGTATCGCCACTCGTCCCGCCTCAAGGCAGAGGCAGACG
AGGACGCCAGACTACCACATATTTGAACAGCCAACAGCTTCTGGAAGACT
ACAATGGCCAACTGAAACCAAAACAGATTTCTGACCTTAAGCTATTGTCG
ACAAAAGAAACGAACTGAAAGAAACTTAGTCACCTGCGTTATAGTCGATA
GATCAGGATGATGATTTGCCCCGATGTAAAGATAGCATCAAATCAAAATT
AAATCAAACTTTATTGTAAACGAACTGAGATAAGAATGTGTTTATTGTCT
GTCCATAGCTGCGCCCGTTGCCCTGCTGAGCTGTACCGATCCAGACGACG
GTGTGAACTCTGACCTCGCCTTCTCCATCGTCAGCGGCGACGACACTGCC
GCAAAATTCGACATCGACGCGGACACGGGACAGATTACGACATCGTCCAC
TGCGGTGGATTACGACACCGACGCCATGGAGACGGCCGGTTTTCGGTACG
TTCTGTACGTGAGCGTCACCGACCAGGCCGCGGATGTCTCCGACAGGCTC
ACCAGCACCGCGACGGTGGTCGTTGCGGTAAGGACATTCGTATTTTCACC
AAGTCATTGCACAATTTTAACATCTGCTAGAAATAGTGTATGGCTTTTAT
TGATCTATCTAGTCTATGAATATCACATGGAGGACGCGAGGAAGTAGCCT
GTTCGCTCCTCTGATCGCTTCCCTTGTCAAATATATATTACCAACAGGGA
AACACTACAAACCTTCGTGTATCAACATTCCTAAGGGATGGTTACTAAAA
GTGCACGCTATATGTTTTCAGGTAACGTCAACAAACGACAACGCGCCGAC
CTTCACAAGTTTCGCGTCGTCAGTGGCGGTTGACGAGGACGCGTCCGTCG
GCACCACGATCCTGTCCGAGCTGAGCGCGACGGATGCCGACAAGGGCGCG
GACGGAGTCGTCAGTTTCTCCATGATAGCC Coding sequence (CDS) from alignment at Sc0000124:485017..486596- >transcript:BL96778_cuf9 ID=transcript:BL96778_cuf9|Name=transcript:BL96778_cuf9|organism=Branchiostoma lanceolatum|type=CDS|length=708bp|location=Sequence derived from alignment at Sc0000124:485017..486596- (Branchiostoma lanceolatum)
GATGGAGACGACGGGGACACCATCTCATATTCCCTCTCAGGGACGAACAA
TGACCACTTCGCCGTTGACAGCAGCACGGGTGCCGTGACCACCGCCAGGG
TGCTGGAGCGGGACGGGGCGGACGGCGTGTCGGCCTACACGCTCGTTCTC
ACCGCCACGGACACCGCCGATAACACGGGCACCGCCACGCTCTCCGTCAC
GGTCAACGACGTGAACGATAACAGCGCCACTTGCGATCCTGACGTGTACT
ACAGCACAGTGGAGGAGAATACTGCAGCAGCTGCGCCCGTTGCCCTGCTG
AGCTGTACCGATCCAGACGACGGTGTGAACTCTGACCTCGCCTTCTCCAT
CGTCAGCGGCGACGACACTGCCGCAAAATTCGACATCGACGCGGACACGG
GACAGATTACGACATCGTCCACTGCGGTGGATTACGACACCGACGCCATG
GAGACGGCCGGTTTTCGGTACGTTCTGTACGTGAGCGTCACCGACCAGGC
CGCGGATGTCTCCGACAGGCTCACCAGCACCGCGACGGTGGTCGTTGCGG
TAACGTCAACAAACGACAACGCGCCGACCTTCACAAGTTTCGCGTCGTCA
GTGGCGGTTGACGAGGACGCGTCCGTCGGCACCACGATCCTGTCCGAGCT
GAGCGCGACGGATGCCGACAAGGGCGCGGACGGAGTCGTCAGTTTCTCCA
TGATAGCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000124 | genome | Sc0000124:485017..486596 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96778_cuf9 |
| Biotype | protein_coding |
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