|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96918_cuf9 >transcript:BL96918_cuf9-protein ID=transcript:BL96918_cuf9-protein|Name=transcript:BL96918_cuf9|organism=Branchiostoma lanceolatum|type=polypeptide|length=330bp
CVEPCDKITGICGSACLPGWRGVTCGQPCPPGRFGPNCMSFCRCLDGEAC
DAVNGTCPNGCRAGWKGEGCQDACATGEWGSGCEGRCYCRDNTNHCNLAT
GPTPDCQCDDYHFGEDCMEERVAPFITDITNVAVNPGEATFLSCSAAGSP
LPTADDIVLRDQNGQVYPRFAGFPGGNYTTNSFRIPSTDQDTEYYCVATT
TSGSTFQRVEFTFYELPRLTHPPVIQPINIHPTLVLVDWAAWNETIDVGE
GPIRSYQLHFKKSEDDDWLPYGDETPSDQSKASYRQMVMRLDFSTQYGFS
VQTFREGNNGGGPLGPVLTVETKCMAPTEP Run BLAST on NCBI mRNA from alignment at Sc0000014:3005132..3008602- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96918_cuf9 ID=transcript:BL96918_cuf9|Name=transcript:BL96918_cuf9|organism=Branchiostoma lanceolatum|type=mRNA|length=3471bp|location=Sequence derived from alignment at Sc0000014:3005132..3008602- (Branchiostoma lanceolatum)
TGCGTCGAACCGTGCGACAAGATCACGGGCATCTGCGGCTCCGCCTGCTT
ACCCGGATGGAGAGGGGTCACCTGCGGGCAACGTGAGTCTTTTCTTAGTC
TTTAGTTAACGGCCTCCTTCTTTCTAAACCATTCTACATGTGCTGATATC
TACAAGTTTAAGAGTACGAAAAAGCTGACATTGTCAAGGAATGGTGGTGT
GTTACGCCGAAGGGTGGTTATACCGACTATACAGATACAGTCACATACAG
AATGAGCAACCCACCGCTTCTGTGACGTCAGTTAATGCAGATAGAACACG
TGACTCAATGAGAGGTGGCCCCCCGTCTCTTTCAAGCTTAGACGATAGAC
TATCGACGACATGTATTTATAGATTGTATCATATATCGATTATATTCAAC
AGAACGTGTTGTTTCTTTCTTTCAGCTTGTCCCCCTGGCAGATTTGGACC
GAACTGTATGTCGTTCTGCCGTTGCTTGGATGGTGAAGCTTGCGATGCTG
TGAACGGGACGTGTCCAAATGGATGCAGAGCGGGATGGAAAGGAGAGGGG
TGTCAAGACGGTAGGGAACTGTCTTACATTAGAGTTTAGCCTAACGTTAC
AGAGCTGTGCGATTGCAATGACGTGCCCTCATTCCAGCAGGACTTTCCAT
GAAAATGTCTTCAAATATATGTTGTCCCCGTAATACTTAGGTGCCCGTCG
GTGACGGTGGTGTAGTCCCGGCCGGGCCCCGACGCCACACTTTTGTCCTG
GTGGACTACCGTTTATGGTGGGGGAACCTCCCGGTGCTCGTACTAATACC
TCACGGCGTCTATTTGCTATTGGGTCCCGCGTTGATTTTAAGCTCGGGAT
AAAATGATTCGGGGTCCTGACCGAGCCCCAAAATTGCCGTGAACCGTAAA
CTACACGGCGGGCCCCTTTTTTTCAAGTGGGACCTAAGCATAAACAGAGA
ATGAAAATGTTTTAAGATACAGTTTTCTTAACCCTTTGAAATGTTCTGTT
TTGTTGCTTTTAGCCTGCGCAACAGGCGAGTGGGGCTCCGGATGCGAGGG
TAGATGCTACTGTCGAGACAACACCAATCACTGTAACCTAGCAACAGGAC
CAACGCCCGACTGCCAGTGTGACGACTATCACTTTGGTGAAGACTGTATG
GAAGAAAGTAAGACCCGATTTACACACAAGTTTGCGGAGTCGACTACGGG
CTTTTTGTGAGAAGCTTTAGGCTGCTCAAGTGGAGGTTTCCTACTAGAAA
ATGATACTTTATATATACATATTAAGAAGGACCACAACGACAAATTACCA
ACTGCGAAAAACAATTTCCCCACCTGCACTTTGGAAAATTGTCGTTGTGA
TCCTTCGTACGTAACTAAGCACACCTTGCATATCCGAATCTAAGCATAGT
TTCAAGATAACCATGTAATTATAGGGTTCAAGAGTATTAGACAAAGATAC
CAAATTAACGTTTTCCCCTTTTCGATAGGAGTGGCACCTTTTATAACCGA
CATTACAAACGTGGCGGTGAACCCGGGGGAGGCGACGTTCCTGAGCTGTT
CGGCGGCGGGAAGCCCGCTCCCTACCGCGGACGACATCGTCTTGCGGGAC
CAAAACGGACAAGTACAAATCCTTGCTCTTCTTTACGTATACATGTTCAT
GATTAGCTAGTGCTGTGTACCTAAATTCAGGTTCAGGTTCGGGTCAAGAT
TCAGGTCCTGAGGTTCAGTCAGTAGTAAACACAACAGGACGGCAATGTTT
TCGTCTTTTTTTATAGCACAAATTTCACGATGCATGGAAAGTTTTAGATG
GTTTAGAACAAAAATGAAAAAAGTAAGCGAGAGTTTCTTGCAAGTCCGGA
CTTGGTATCCGACATTTAGATTTTTTTTTACTTAAACCTAAACGTGTTTT
ACAAGTCCAGTTCAAGTCCGGTGTCTAGGTACGCAGCACTATTCATGATA
TACCAAAGTGACGTCCACAATTCTCACGGTATTTCTGTAAGCAGGTTTAG
GGCTCACGAAATGTTTTCGAGTTGCTTAAAGTTTTCATTTTATATGGTGC
GGACTGACTGTCTTTCTTAATGCTGAAATCAGGTGTATCCTCGCTTCGCC
GGTTTTCCCGGAGGAAACTACACCACAAATTCATTCCGGATCCCTTCAAC
GGATCAGGACACGGAATACTACTGCGTAGCAACCACAACATCCGGCTCGA
CGTTCCAAAGGGTGGAGTTTACCTTCTACGGTAGGTTTACAATGGAAATA
CTAGTAGTAGAGGGTCCAGGACGCTTCCTTGAGGTACGACGGCAAAATAC
AAAACCAGGTTTTATTCAAGCCATCTTCTCCCTTGGTGGGCTTGAATAAA
GGTTCTAAACGGGAACTATGCAGCTACAGTGTCTTTTCTGAAGATGAGGC
ATGAGTGCGTACGGTTGACTTGAGGTTTTCTACTACTAATTACTTTAGTG
GCAACTGGAGAGTTATATGTCTTGGCGCAAATTCTAGAAGTGGCATAGTA
CAAAGTGGTGTTACCTTCATGAAAAAATGGAGGTATTGTTTTTGGTCTGT
CTGTGTGTGTGTGTTTGTGCAAAAGTGCCATAGCCCTCCATCTGAATGGT
AAATAATAGTAATTTTAAGCTTGTGACATGTGCAAGTTAGCTAAAGGTGT
ACATAGCCATGCGTAGATTATGTAATTGTATAAGTCATTTGCATGAATAA
AATATTCCATGAAGGTATGAGGTCTCCAAACTCTTGTATGTCATCTTGTT
AACGCCCAGAACTGCCCAGATTAACCCATCCGCCTGTGATTCAACCAATC
AACATCCACCCCACGCTCGTCCTCGTCGACTGGGCAGCTTGGAATGAGAC
CATAGACGTTGGTGAAGGACCAATCAGGTCGTACCAACTTCATTTTAAAA
AGTCCGAAGACGATGATTGGCTGCCATACGGTGACGAGACTCCATCGGAC
CAATCAAAAGCGTCGTACAGACAAATGGTGATGAGGCTGGACTTCTCGAC
GCAGTACGGTTTTAGTGTGCAGACGTTCCGCGAGGGCAATAATGGCGGCG
GTCCTTTGGGACCAGTTCTTACCGTCGAGACCAAGTGCATGGGTTGGTAC
TCCGATCAGAATCTTTGGTATAAGAAAAGGAAAGTCACGTCTTGCGCACA
GGTGTTCCAGTGCTGATTCAATGGTCAGACCGGTATCAACACTTGACGCC
GAGAGCTGAAGAAAGTTGAGCACTGGAATTTTAGTGCCGAATTCGAACGT
GCGATGAATCGGTCGCGGGTGTGCTCAAGGGTTTGAAACCGCCGTCAGCA
CTAGAACCTAGTGCTGAATTACAAAAGCTTCACATTCCACACCTTCGTAG
TTTTGCGTTTGTAAATTAATGTTGGAACTAAATGTCTAGATGTTTTGTTT
TTTTCTGAAATGTCGAATAGCTGTAAAATGTTTTTTTTCTCTTACCACTC
CTATAGCGCCGACAGAACCTC Coding sequence (CDS) from alignment at Sc0000014:3005132..3008602- >transcript:BL96918_cuf9 ID=transcript:BL96918_cuf9|Name=transcript:BL96918_cuf9|organism=Branchiostoma lanceolatum|type=CDS|length=990bp|location=Sequence derived from alignment at Sc0000014:3005132..3008602- (Branchiostoma lanceolatum)
TGCGTCGAACCGTGCGACAAGATCACGGGCATCTGCGGCTCCGCCTGCTT
ACCCGGATGGAGAGGGGTCACCTGCGGGCAACCTTGTCCCCCTGGCAGAT
TTGGACCGAACTGTATGTCGTTCTGCCGTTGCTTGGATGGTGAAGCTTGC
GATGCTGTGAACGGGACGTGTCCAAATGGATGCAGAGCGGGATGGAAAGG
AGAGGGGTGTCAAGACGCCTGCGCAACAGGCGAGTGGGGCTCCGGATGCG
AGGGTAGATGCTACTGTCGAGACAACACCAATCACTGTAACCTAGCAACA
GGACCAACGCCCGACTGCCAGTGTGACGACTATCACTTTGGTGAAGACTG
TATGGAAGAAAGAGTGGCACCTTTTATAACCGACATTACAAACGTGGCGG
TGAACCCGGGGGAGGCGACGTTCCTGAGCTGTTCGGCGGCGGGAAGCCCG
CTCCCTACCGCGGACGACATCGTCTTGCGGGACCAAAACGGACAAGTGTA
TCCTCGCTTCGCCGGTTTTCCCGGAGGAAACTACACCACAAATTCATTCC
GGATCCCTTCAACGGATCAGGACACGGAATACTACTGCGTAGCAACCACA
ACATCCGGCTCGACGTTCCAAAGGGTGGAGTTTACCTTCTACGAACTGCC
CAGATTAACCCATCCGCCTGTGATTCAACCAATCAACATCCACCCCACGC
TCGTCCTCGTCGACTGGGCAGCTTGGAATGAGACCATAGACGTTGGTGAA
GGACCAATCAGGTCGTACCAACTTCATTTTAAAAAGTCCGAAGACGATGA
TTGGCTGCCATACGGTGACGAGACTCCATCGGACCAATCAAAAGCGTCGT
ACAGACAAATGGTGATGAGGCTGGACTTCTCGACGCAGTACGGTTTTAGT
GTGCAGACGTTCCGCGAGGGCAATAATGGCGGCGGTCCTTTGGGACCAGT
TCTTACCGTCGAGACCAAGTGCATGGCGCCGACAGAACCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000014 | genome | Sc0000014:3005132..3008602 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96918_cuf9 |
| Biotype | protein_coding |
|
