transcript:BL97018_cuf12 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL97018_cuf12
Unique Nametranscript:BL97018_cuf12
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL97018_cuf12

>transcript:BL97018_cuf12-protein ID=transcript:BL97018_cuf12-protein|Name=transcript:BL97018_cuf12|organism=Branchiostoma lanceolatum|type=polypeptide|length=156bp
YNTTQVIVRIVTAQYAATATQNAFVTVVTTNQVTGLAIDNTSAVIQNDVT
VSQTAQMTLTQQWSADLVNKTSVTFTTLQTQLQEALSVEFGTVVGFQRAD
VVQFSQSSTNTTVVVVRMIVTSYAAPAVQTNFVTTVSSGQLGGVSVTANS
VTVKKD
Run BLAST on NCBI

mRNA from alignment at Sc0000025:1373451..1374459+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL97018_cuf12 ID=transcript:BL97018_cuf12|Name=transcript:BL97018_cuf12|organism=Branchiostoma lanceolatum|type=mRNA|length=1009bp|location=Sequence derived from alignment at Sc0000025:1373451..1374459+ (Branchiostoma lanceolatum)
ATACAACACTACTCAGGTCATAGTGAGAATTGTTACTGCACAGTATGCTG CAACTGCTACCCAGAATGCATTTGTTACCGTGGTGACAACGAATCAGGTG ACCGGTCTTGCCATAGACAACACTTCAGCTGTCATTCAGAACGATGGTAA GCACCCTCTGGCAGAACGTAGAGAAACTGCAGTGCAGACACACAAATGGA CTATTTCACTCTCTTGTGGCTTAATTTATAATGAACCATTGGCAGTAAAT TTTCGATATTCCATAAATCTGCGATAAATAATGAAAAAAGACTGACGGTA GGAATTGTTCTTCTTGTTTACAGTGACGGTTTCTCAGACTGCTCAGATGA CCTTGACCCAACAGTGGTCAGCTGACCTTGTGAATAAAACATCTGTGACC TTCACTACCCTTCAAACACAGCTACAAGAAGCAGTAAGTAGCCAAAATTC TGGAATGTTTGGATGCTAATAAGTTTTGATAACTGGATGAATGTTATGTA CATTGCACATTGTATGCTCAATGTGTATTGAACCAATATGGTCTAATGTA TTTGTGTATATTGTACATATCTATACTTTCTAACTTATAGTTTATTCCGT GATAGCTAACACCTTATTTATCATTACCTTTTTTTTTTACTCTCTTCATT TTTGTCTTCTGTAGCTGAGTGTGGAGTTCGGAACTGTAGTCGGCTTCCAA AGAGCCGATGTGGTCCAGTTTTCCCAAAGGTAAATCAAAATCAGTATTTT GACATTCATCTCTTGTACCTTCGATATCTATGATCTAGTAAACACATTTT ATACACAGCTTTATCATTCCAAAGACATAACCTTTTATCTTCCTGTCAAT GTTTTTCCAGCTCTACCAACACGACTGTTGTCGTAGTCCGTATGATAGTG ACCTCCTATGCGGCTCCTGCGGTCCAGACAAACTTTGTAACGACAGTCTC GTCTGGACAACTGGGTGGAGTCTCTGTTACTGCAAACTCTGTAACAGTCA AGAAAGATG

Coding sequence (CDS) from alignment at Sc0000025:1373451..1374459+

>transcript:BL97018_cuf12 ID=transcript:BL97018_cuf12|Name=transcript:BL97018_cuf12|organism=Branchiostoma lanceolatum|type=CDS|length=468bp|location=Sequence derived from alignment at Sc0000025:1373451..1374459+ (Branchiostoma lanceolatum)
TACAACACTACTCAGGTCATAGTGAGAATTGTTACTGCACAGTATGCTGC
AACTGCTACCCAGAATGCATTTGTTACCGTGGTGACAACGAATCAGGTGA
CCGGTCTTGCCATAGACAACACTTCAGCTGTCATTCAGAACGATGTGACG
GTTTCTCAGACTGCTCAGATGACCTTGACCCAACAGTGGTCAGCTGACCT
TGTGAATAAAACATCTGTGACCTTCACTACCCTTCAAACACAGCTACAAG
AAGCACTGAGTGTGGAGTTCGGAACTGTAGTCGGCTTCCAAAGAGCCGAT
GTGGTCCAGTTTTCCCAAAGCTCTACCAACACGACTGTTGTCGTAGTCCG
TATGATAGTGACCTCCTATGCGGCTCCTGCGGTCCAGACAAACTTTGTAA
CGACAGTCTCGTCTGGACAACTGGGTGGAGTCTCTGTTACTGCAAACTCT
GTAACAGTCAAGAAAGAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL97018gene:BL97018Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL97018_cuf12transcript:BL97018_cuf12-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL97018_cuf12-E1BL97018_cuf12-E1-1564476830-161412Branchiostoma lanceolatumexon
BL97018_cuf12-E2BL97018_cuf12-E2-1564476830-161414Branchiostoma lanceolatumexon
BL97018_cuf12-E3BL97018_cuf12-E3-1564476830-161416Branchiostoma lanceolatumexon
BL97018_cuf12-E4BL97018_cuf12-E4-1564476830-161419Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000025genomeSc0000025:1373451..1374459 +
Properties
Property NameValue
Transcript idBL97018_cuf12
Biotypeprotein_coding