|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97228_cuf3 >transcript:BL97228_cuf3-protein ID=transcript:BL97228_cuf3-protein|Name=transcript:BL97228_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=261bp
SQLGLEATPLPDSLEKKKMQIAGWSANLLENASGELGNMSHWNIGGDWKI
REGGYGTEKCFVTSHMRCTKYQEVDLTKTFSEEHLDSSPEIQVSEWYTQG
VCGGGFYTLEVTLMTYDGDVIKRYKSGERGNLYSGQWHEEKVTFTDYGAG
VRLVGIQSSGKDDKHWGGHYGARMSNAFVRVRREANAAEDDKFADVISEN
VTEEERNQQAALREKVVQKVLTENAELWSQDSNEGNVHLLRTKRFRNVCT
SKLISNDAKLD Run BLAST on NCBI mRNA from alignment at Sc0000303:279863..282477- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97228_cuf3 ID=transcript:BL97228_cuf3|Name=transcript:BL97228_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=2615bp|location=Sequence derived from alignment at Sc0000303:279863..282477- (Branchiostoma lanceolatum)
TTCACAGTTGGGTCTGGAAGCCACGCCCCTGCCGGACAGTCTGGAGAAGA
AGAAAATGCAGATCGCCGGCTGGTCGGCAAATCTCCTGGAGAACGCCAGC
GGAGAGGTACGTCAGGGGGCTTATCTAGATCCCGGTTACCGTCAAGGTCG
GCTGGTGTTCGGCCAGGCTGGCTTGTGTAACTCCTACCTTGCAAAAATAC
AAGGCAATCAAATAGATCTAAATTGTACAGCAATTTAACTATCAAAGAAC
AAGAAAATGTCTATTGCCAAGAGTTATGTTACGGAAATGGGAGCTATAGA
ATACAAAGTTATGACCAACGTAAATTATATGATTTGCATAATTATTCATG
ATATCTTTACGAACTATATCCCACCTGTCTTTTTTCTACAGTTGGGGAAC
ATGTCTCACTGGAATATCGGTGGCGATTGGAAGATCCGCGAAGGAGGATA
TGGCACCGAAAAATGTACGCTATCATTATTTGTTTATTTGGGTTTACCAC
AACGTGGAAGGGAGGGCGAAACAGGTGCATGCGCACCTTTACAAATTCTC
CTCTCACACTTGAAACAACATCAACAGTACTAGTACAATACTTTGCAAAA
TCAACTATATATTAAAAAATACAATGTCAGTGTGTTTGTGTGTTTTGCTC
AAAATCCTATCCGCCCCCCCCCCTTCCTTCGGTACGTCAATATCACAAGT
TCGGGGAGTCGTATAGTTCGGGGAGTCGTATAATTTACGCTGACAAATGG
GCTATACAGATATGCGGAATCTACTGTATATACAAAGCGGGTCATAAAGG
AAGCATCACCCGGGTATTGGTATACAATGAAAGACTATATCTGTATATTG
GACGAATGGCTCTTTCGTTGATTCGTGGTAACGTTATGTGCTGTAGGTTT
CGTGACGTCACACATGCGCTGTACAAAGTACCAGGAGGTGGATCTGACCA
AGACGTTTTCTGAGGAACATCTGGACTCGTCTCCTGAAATCCAGGTAGGT
TCTCACGATAGGGGTGTATATGACTACAGATTCTGAGTGACAGAATATTT
CCTTAGTAGGCTTGATTAACATGGCCATTATAATGTATCGGAAGTTGAAA
CGCACACAGAACATGGCAAGCATGATAGATATAGGTTCCATGGTTTCTAT
GCAAAGTCAAAGCCCGTCAAATATTTGCCTTTTTACGGTCGTGGAATCGG
TCTATTTACCGGTCTTTGACTTGTATTGAACCTGTATCTATCTTGCTTGC
CACGTTGTCACGCAACCACTCTCTCATTGGTCGAATGGATAATTGTCATG
CTGTCATTGGTTGAACTGGTAATTGTGATGGACAGTCAGGATCAGTCTAT
TGCATACCGGAAATTTCAAAGTTATCACCGCGCTTTTTTGCCATTCCCTA
CAGGTGTCGGAGTGGTACACACAGGGTGTCTGTGGTGGAGGGTTCTACAC
ACTGGAGGTGACCCTGATGACGTATGACGGCGACGTCATCAAAAGGTAAG
GACAGGCCAATGACCCACCCCACGAAGCTGCTCTATACCATAAACTGTAT
ATAGCTGATGTCAGCAGCAACTCATTAGCTGTAAAGACCTCTCTCTCTGG
ATAACTAGTGCACTAAACTTTCTCACGAACAGAAAGACGCTTTTCTCTCA
AAATCGCAGAACCAAATTACAGAAACAATGTGTCTTTTCGTCTTCCTCTG
CTTCCAAATATGAAGGCAAACGCAACTTGTCTAGATATAGCCAACACTGG
TATTTGAGTAGTCTGTTGTTACAACAATGTCAATCACATCCTAGTACCAG
GTACTTGCACTTCCTCTCGGGCATGAACTTGCAAATAAACTTTTTGATAA
TAAACGCTGGCGTGAATGACTCAATGCAGTGATATTTGGCACCGAGGGGC
TCATGCATTATCCATCGTTGTCTTTCAGGTATAAGAGCGGGGAGAGAGGA
AACCTGTATTCAGGACAGTGGCATGAGGAAAAAGTCACATTTACCGACTA
CGGCGCAGGAGTAAGACTTGTTGGCATTCAATCATCAGGTACGGTAGACA
TGGCCCATGTGGGAACTTAACGTCAACTGTTGAGGAATATGATGTCTTTC
GCAGTCGTGTAACACCAACTCAGTTGTTTATATGTACCCTCAAAAAATCA
ATAATTATAGCCAATATCTTTTCACTCATTTTCATCAGGTAAGGATGACA
AGCACTGGGGCGGTCATTACGGTGCCCGGATGTCCAACGCCTTCGTCAGG
GTGAGGAGAGAGGCGAACGCAGCGGAAGATGACAAATTTGCTGACGTAAT
TTCCGAGAACGTGACGGAAGAAGAGAGGAACCAGCAGGCAGCCTTGAGGG
AGAAGGTCGTTCAGAAGGTGCTGACGGAAAATGCCGAACTTTGGTCACAG
GACAGCAACGAAGGTAATGTTCACTTATTACGAACAAAACGTTTTAGAAA
TGTATGTACATCAAAATTGATTTCTAATGACGCCAAACTTGACTAAACAC
TCAGTGTAATGGTTGAGAAATATAGATTATGAGCCTGGCATGGCGTTGGC
CTTTTAAAGTGTAAAAGTGATATATCTGAGTGGAAAATAAATAGTCATGT
CGAAAAGTGCTATAC Coding sequence (CDS) from alignment at Sc0000303:279863..282477- >transcript:BL97228_cuf3 ID=transcript:BL97228_cuf3|Name=transcript:BL97228_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=786bp|location=Sequence derived from alignment at Sc0000303:279863..282477- (Branchiostoma lanceolatum)
TCACAGTTGGGTCTGGAAGCCACGCCCCTGCCGGACAGTCTGGAGAAGAA
GAAAATGCAGATCGCCGGCTGGTCGGCAAATCTCCTGGAGAACGCCAGCG
GAGAGTTGGGGAACATGTCTCACTGGAATATCGGTGGCGATTGGAAGATC
CGCGAAGGAGGATATGGCACCGAAAAATGTTTCGTGACGTCACACATGCG
CTGTACAAAGTACCAGGAGGTGGATCTGACCAAGACGTTTTCTGAGGAAC
ATCTGGACTCGTCTCCTGAAATCCAGGTGTCGGAGTGGTACACACAGGGT
GTCTGTGGTGGAGGGTTCTACACACTGGAGGTGACCCTGATGACGTATGA
CGGCGACGTCATCAAAAGGTATAAGAGCGGGGAGAGAGGAAACCTGTATT
CAGGACAGTGGCATGAGGAAAAAGTCACATTTACCGACTACGGCGCAGGA
GTAAGACTTGTTGGCATTCAATCATCAGGTAAGGATGACAAGCACTGGGG
CGGTCATTACGGTGCCCGGATGTCCAACGCCTTCGTCAGGGTGAGGAGAG
AGGCGAACGCAGCGGAAGATGACAAATTTGCTGACGTAATTTCCGAGAAC
GTGACGGAAGAAGAGAGGAACCAGCAGGCAGCCTTGAGGGAGAAGGTCGT
TCAGAAGGTGCTGACGGAAAATGCCGAACTTTGGTCACAGGACAGCAACG
AAGGTAATGTTCACTTATTACGAACAAAACGTTTTAGAAATGTATGTACA
TCAAAATTGATTTCTAATGACGCCAAACTTGACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000303 | genome | Sc0000303:279863..282477 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97228_cuf3 |
| Biotype | protein_coding |
|
