|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97263_cuf14 >transcript:BL97263_cuf14-protein ID=transcript:BL97263_cuf14-protein|Name=transcript:BL97263_cuf14|organism=Branchiostoma lanceolatum|type=polypeptide|length=431bp
MKVALGLVSVLLVANLQNIESQIPPPLANTCPYPVDLVFLIDSSESFRTS
GFEDAKTFVLNVVNYFTLAEDQTRVGVVTYSNEDAQVTRIKLNEKYDRVE
LLTAIRDIPYDRGHTFTGLGLDHVRNNSFLDVNGRRSTTPDFLVVLTDDN
SEDSVTRPAQLVRQMGITVFVVGVGEEADIDQATLENIAGTPSRVFRLTD
HDFLTDVQHPTDIREAICNAAKCPELTAPANGARTPPTEGNSIQDTVTFT
CNSGYLLDGAASVTCQADLTWTAPPPTCRLVTCPARTAPVNGAVSSTAIG
RYQDAVTFTCDQGYNLVGSNRITCQANGAWSANPPTCNPAQCSAQTAPQF
GSITPTGPVSFPGTTTFNCNAGYTRNGATGSTCQADGSWSNPVHSCTRRQ
CQPPVTAPVNGARAPATGANSFQDRITFTCD Run BLAST on NCBI mRNA from alignment at Sc0000002:4017738..4024320+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97263_cuf14 ID=transcript:BL97263_cuf14|Name=transcript:BL97263_cuf14|organism=Branchiostoma lanceolatum|type=mRNA|length=6583bp|location=Sequence derived from alignment at Sc0000002:4017738..4024320+ (Branchiostoma lanceolatum)
AGAGTTGGGATTAGAGTTGGAAGCACAACATGAAGGTTGCCCTTGGGCTT
GTCAGCGTTCTTCTGGTGGCAAATCTACAGAACATAGGCAAGTAACTCTG
AACGCTTTCTTTGCCTATACTTGGTCTTATCTTAGTAAGTGTATAACAGT
CGATTAACGCGGTTAGAATGGAGTTTAAAAAGACGCCAAGGTTGACTTTT
GACCCACCGTTTAGGGTGTGGAGGGCAGTGAAGTGGTACTGATTTGATAC
GGGGTCGGAAAGAGCAGCCAAGCATTTCAAAGTTTAGCTGATATTGTGTC
ATCTGTACGAGGCATTGATCATAGAGGCATGCAGGTAGATTCTACTATTA
TTAGACTCCGTAATGTATCGTCATTGTTAGTAATTCTGGTAAGAATATTT
CATCATTTGCTATTAAGTGAAGATGACCTTGAACGTCCTTCAAATCACAG
AACACTGGTTGTAAATGAAACCCAGACTGTGCTTCTGTCTAAACTTGAGA
CTTAACGGGTTTTGTTTGATTTTTTTCAAAGGATAGTTCGTTGGGTTTAG
GTACTACCCATTGTACAACTTAACTATGCATAACTTGATTCGGCTATTCA
ATGACTCAAGAAATATCCAGAAAGGGGGCTATGACTTTGCACAGGGCCAT
GACGTATCGATTTGCACACCATAATGAACTGGAGAAACAACCAAAGAAAC
AACTATCAATGCAAAAACTAAAAACAAACCTTCCTAAACAGTAAATACAC
AATTTGTTTCAGGATGAAACATCCCTGATAAAACTACATGTACAATAGCT
TGCGCCATGTTTTGAAATCATAGTGTAACAATTCAATATCGTTTTGCACT
TGCTCTCGCACTGATCGACTTACGTGGCGATCGACCGTTTTTGACACGAT
TTAACACATTTCGGTATGTTGATATGCCCCAGTCAATAGTTGGTAATCTT
CTTTTCACACCATCACTTTTGTTGAGGACCTTTCTACCTATCTCTAACTA
ACTTGGCAGGATAGAGACTTAGGTGCTCAACAGAACGTTACGCCATCCCT
GTTACTACAAAGATGTTATTAATACTTTGTTGCAAATGCAAGCACTTTGG
CGTCATTCTGCGAATGATTGTGCAGAATTAATCGTAATGGCATTTTGGAC
AAGTCTAAAGGCAGAGGTAGTGGGGTGCATGTATCGTCCTTGGGATAGAA
GTGTTTTGAATGTTCGCAAAATTAAGCTTATATCAGCTAATATCAGCTTA
TCATCATCATCATCATCATCATGTCGGGCGGGTTGCCCGGACTAAGTCAA
CCCTCTTCCTCCAGTCGCTAGCTTATATCAGGGGATAAATTTCTCTCCTA
TGTCGTTAGGATATCTTATTGGAAAGTTGTGGCCTTCATAGTATCACAAC
ACGTCAAATGGACCTGACAAAAATCATCTCATTCGAACCTTGCAGAATGG
AGGGAACTGATCTTTCCAAATTTAAGTTTCCTAATATACTAGCATGTTGT
TCGATTATTTCAGACCTCAAGAAAGACTTAATAGGTACCACAAAATCATG
ATCAGTTTTGCAGCATGCGGTGTGCCTACGATATACAGAGAATAAAAAGA
GGTATACACGGGTATACAGTATATGATATACTAGTGCAGAGGATATACAG
AGGTATATACGGGTATACAGTATGCGATATACAGAGGTGAACGGGTCATA
ACGCGTCTCTAGTTTGACCTGTCAATTGACCTCGATCGGTGACTATTCGC
CATGCATGATTAACCTACAAACATTGACACTTCTCTCTTTATGAACAACC
TTGTGATGTGGTGAACATAAAGTCGTATAATCTTTTGAGTTACCTGAGGA
ATGTTTTTGTAGCTTTACTTCATATTTGCTTTAATGGACAACAAAGAAGA
AATTAAAGATACAATTTTTAAACATCATACCCTGAGGCAGGCTTCTCTAA
GAAATGATCGCGAAGGACAGACAAGGACAGTGCATCTAAATATTCCTTCA
ACTTTCATTCTGAGATTTCTAACATCGCGGGTAACAGTTTGTGTCTGACA
GCACGGCTTACGCCCCCCCCCCCAATACTGAGGAATTTGAGTACACAAAG
AACCATTATTTTCTCAGGGCGTGCCTCAAATGACAGTAAACCCACTGGCG
ATAATGCTGCAAATTACTCGGTCAAGCGAAATTGGGGGTTAGCCATAGCC
TGGAGGTGTAGAGATCATTTAGTTGGAACAACAATGGTTGAACTTTCACC
TGTCCATTCATAACAGAGAAATCAATTGAAGAAATTAAACATGAATATGA
ATGGGCTTTATTGCTCGACTATCGTACATAATGCATTGTAACAACTACTA
AACAACAATGATACAAGACTAATTTATCCTACATTTACAACTAAAAGATA
TAGATAACCGTAAAGAGTAATTATATTGAATACCTACTTTTTCTTTTGCA
GAGTCACAGATTCCACCGCCACTAGGTAAGTACAGCAGTGCTTTATCGTA
TCTTATTGTTCTTTGTAGATAGCAGAAAACTGGTCAGAAATCTAAATTCT
AATGTCCTACATCAAACACGATGGACTGAATCTAAGAACAGCACAATGCT
AATGAATTTAACCTAACTTAACATTGATAAACGCCTGTATTTATAAAGCG
GAATTCCATATTTCACTCACAGTTATGTTGCAACTTAAAGGTCCTTGTTT
TATTGCTGACAAAACGTGGCATAAATGTAAGAACTATGTGTTTTAGATTA
GAGGCATGAAATTTTACTTTTCCATTTGGTGTCAACGACATAAAACATTT
TCCCATCAATTTCATCTTTTCAGCCAACACCTGTCCTTATCCGGTAGACC
TGGTCTTCCTCATAGACAGCTCGGAGAGTTTCAGGACAAGCGGCTTCGAA
GATGCAAAAACATTTGTCTTGAACGTAGTCAACTATTTTACGCTCGCAGA
AGACCAAACAAGGGTCGGTGTTGTTACGTACAGCAACGAAGACGCGCAGG
TTACTCGCATTAAGCTCAATGAAAAGTACGACAGAGTTGAGCTCTTAACA
GCGATTCGCGACATTCCCTACGACAGAGGCCATACCTTCACTGGACTTGG
TCTCGATCACGTGCGCAATAATTCCTTCCTCGACGTAAACGGCCGTCGGA
GTACCACTCCCGACTTTCTGGTCGTATTAACCGACGACAACTCCGAAGAT
AGCGTCACTCGTCCAGCACAGTTGGTACGCCAGATGGGCATCACCGTGTT
CGTCGTGGGAGTTGGCGAGGAAGCCGACATTGATCAAGCTACTCTGGAGA
ACATTGCTGGTACTCCGAGCCGGGTGTTCAGGCTCACAGACCATGATTTC
CTCACAGATGTCCAGCACCCCACTGATATAAGGGAGGCGATTTGTAACGG
TTAGTACTATGCCTGTTCCAATTCCTTTAACATGTGCCTTGTGCATACCT
TCTGTCCAACATGTACAGACGTATCTCACTGTGGTCTTTGCATAGTTTAG
GATAGTAGTGTACTTTTCAGCCCATCTTGATGCTCGTTTGGTTTACTAAA
CACGTTATATAGCTTTACTAAATAAAATAGATCCGTGTAATAAGATAAAC
AAACTAAAACTCAACACACCACTCTATCGCACCAACAGACTAAAAAAAAA
AACTATCCAATTCCATACCTTGTAACCCTGCTGAACAAGTGACTTATCTC
TTTGACGCCCCCATGGTTTCTCTACTTCATTGTATCAAACAACATAATCC
TGTCACGAATGTTTCAGTGTTTACAGTGTCAGCTGTCCTTACATCGTTTT
ATGTATTGTAAATTCAAAACTTACTAATGTTTTGAAATTGCGCCATTGAT
ATAATACTTTGCATATAATGATATCGTTTTTAATGCGAGCTGATTAAATG
CCTAACCAATTCAGACTTGCAAGTCTGCCACGTAATGTTTTCAATAAAGT
TTCAAAGAGATTCTTGACAATTTCAGCCGCAAAATGTCCGGAGTTGACGG
CCCCAGCGAACGGAGCTCGGACACCCCCTACCGAAGGGAACTCCATCCAG
GACACGGTGACTTTCACCTGTAACTCCGGATACCTCCTGGACGGAGCCGC
TAGTGTGACGTGTCAGGCGGACCTAACCTGGACTGCTCCTCCCCCAACAT
GCAGACGTAAGATAAATTTTAACTTGCGGCGTCGCGATGGCGCAGTGGCA
GGGTGTTTGGCCGCAGAACCCAGAGGCCCTGCGTTCGAAGTCGGGGTCCC
TGATTTGTCCCATTAACGTTGTACCATTCACACACGTCAGCTTTCCTCAC
TTTACTCAGGTGAAATGAGTATCTAGCTTCGGTTAGGGATGTTGCCCATG
GGAAAGGCACTTGACACGATTTTACTCACTTTACTCAGGTGAAAATGAGT
ACTTAGATTCGGTTAGGGGCGTCCCTCTAATATGACTTTACATTGAGGCC
CCTTGCCTAAAGAGATTGGGCATGCACCTTGAGCACGCGAAAAACCCACC
ACACTTATAGAAAAGAGTACGGGCCCTCCCGGCCCGGCCCAGTGTGATAA
TATACATCTGTCCGGATATGTGTGTTGTACCCTTAGTACAAACCCGGTGT
TTTACGCCTTGAGGCGGTGTACCGGGTTTGCAACATGGAAACAAACAAAC
TAATCAATCGCTCAGTTTAGCAATTAACTAACGATTCTGCTGTCATTATT
GTGCCATCTGACAGGTGTCGTTATTGCACGGAATGTAAACCTCTTACTTT
GTTTGATATGGCGTATGGTATGTAAATGAGTTGTATGGGGCCGAGTTAGA
GCAAATCTTCCAATTTCATATCTCTTGCTTCATCAGCGGTTTTCAGACGA
ACGTCTGTTTCAAGAAAAGGTTTTATTAAATTTACAAATAGACAGGCAAT
GGTATTGGTCATGCACTGACCTGATCCTACATTAGCATGTTTACGGACCA
TGAATCGTATACTAAATATCAAATTCAATTTACAGCTGTGTTAACTGATT
TGCAATGTCTTTTTCATTTTCAGTTGTAACGTGCCCTGCCCGGACGGCGC
CAGTGAACGGTGCAGTGAGTTCTACGGCCATAGGACGGTACCAGGACGCG
GTCACGTTCACCTGTGACCAGGGGTACAACCTGGTCGGCTCAAACAGAAT
TACCTGCCAGGCGAATGGTGCCTGGAGTGCAAATCCACCGACATGCAACC
GTAAGTAAACCTTTCTGACGATTCGCACATGCAACGCCATGGCTGCATAG
TCAGGCTGATAGAAACTACTACCTACCTACCTACATGTAGTCCCTTGACC
TCCGGGTCGTTGGGGGGACAAGGTAGTAGTGAAGATGGAGATCTGTCTCC
AGGCTCGTCTGTTTCTTGCGGCAGTCAGCCTTTCAGCCAGGCTAAGGGAC
GTCCACTCTGCGATGTTATCCTGACAGCATTTCCTCTGTCGTGCCCCACG
GTGACCTCCTTCCAGAGTGCCCTGCAGTATGGGTCTTGGCCAGGTTGTCG
TGGCGTGTCACGTGGCCGAACCACTGAAGCTTACGTCTCTTGACCGTTGC
TAGCAGTGGTTCCTGTGGGCCGACGATGCTAGACAGAAACTAGATCAGAT
CAACTACAAACTAGTTGCTACATAGCCAGGCTGACAGATACTGTGCCGAC
GTGCACCTATATTTGCAGATTTTTTAAATTCAATTCATGGCCTACATGCA
GATGTACGACACAGGTCCTACTTTACAGAAGGACTGTCGAAATGGGTTAG
GGAATTTCCCGAGCAGCCTTCGTAGCCCCTGCTTCTCCTATTGGGTCAGT
TAGTCCTCAAACTTGGTGAGCAGTTGAGCTGGCCTCAATCATTATGTTTC
TTTGTGGCTTTATTTCTGGGTTTGACAGAGGGTTTCTTTTTTCACCTTTC
ATCACAGCTGCCCAATGCTCGGCACAGACGGCCCCGCAGTTTGGATCGAT
AACGCCTACCGGACCAGTCTCGTTCCCGGGCACGACTACCTTCAACTGTA
ACGCGGGATACACACGGAACGGCGCTACAGGTTCGACGTGCCAAGCTGAT
GGATCATGGAGCAATCCTGTCCATTCATGCACACGTAAGAATGGTTTAGC
ACTTGCAGTTACAAGAAAGCTGTTAGTATTTAAGTGTACTTTTGACACGC
CTACACTGTGAGAGCATGAGGAAGTACATGTAAGTCCATTGCAATGCTTA
AACTGAGCTGACAACCAAACGTCTACAAACCAATAATCCGAGTTTACACT
CACTCTACTGTTACTATTCAAAAGCAACAAAAGACGTCGCTCTCTGTACA
TATAAGGTTATTGTCAAAAACAACACATCCCTAGCTATAGGGATTGAGAG
CGTGGAATATTTAGAATTCTTCCCACTCCATCACAGTACTATACTAACGA
CTCCGCCCCTGAGGCGTCGCCAAAAGACGTTTCTCGATCTCATTGGACAA
GTCAATGAACAAGATTATTAAAACTATTTCAGGCAGACAATGTCAGCCTC
CGGTGACGGCACCGGTTAACGGAGCACGGGCGCCCGCTACCGGAGCGAAC
TCTTTCCAGGACAGAATCACGTTCACCTGTGAC Coding sequence (CDS) from alignment at Sc0000002:4017738..4024320+ >transcript:BL97263_cuf14 ID=transcript:BL97263_cuf14|Name=transcript:BL97263_cuf14|organism=Branchiostoma lanceolatum|type=CDS|length=1293bp|location=Sequence derived from alignment at Sc0000002:4017738..4024320+ (Branchiostoma lanceolatum)
ATGAAGGTTGCCCTTGGGCTTGTCAGCGTTCTTCTGGTGGCAAATCTACA
GAACATAGAGTCACAGATTCCACCGCCACTAGCCAACACCTGTCCTTATC
CGGTAGACCTGGTCTTCCTCATAGACAGCTCGGAGAGTTTCAGGACAAGC
GGCTTCGAAGATGCAAAAACATTTGTCTTGAACGTAGTCAACTATTTTAC
GCTCGCAGAAGACCAAACAAGGGTCGGTGTTGTTACGTACAGCAACGAAG
ACGCGCAGGTTACTCGCATTAAGCTCAATGAAAAGTACGACAGAGTTGAG
CTCTTAACAGCGATTCGCGACATTCCCTACGACAGAGGCCATACCTTCAC
TGGACTTGGTCTCGATCACGTGCGCAATAATTCCTTCCTCGACGTAAACG
GCCGTCGGAGTACCACTCCCGACTTTCTGGTCGTATTAACCGACGACAAC
TCCGAAGATAGCGTCACTCGTCCAGCACAGTTGGTACGCCAGATGGGCAT
CACCGTGTTCGTCGTGGGAGTTGGCGAGGAAGCCGACATTGATCAAGCTA
CTCTGGAGAACATTGCTGGTACTCCGAGCCGGGTGTTCAGGCTCACAGAC
CATGATTTCCTCACAGATGTCCAGCACCCCACTGATATAAGGGAGGCGAT
TTGTAACGCCGCAAAATGTCCGGAGTTGACGGCCCCAGCGAACGGAGCTC
GGACACCCCCTACCGAAGGGAACTCCATCCAGGACACGGTGACTTTCACC
TGTAACTCCGGATACCTCCTGGACGGAGCCGCTAGTGTGACGTGTCAGGC
GGACCTAACCTGGACTGCTCCTCCCCCAACATGCAGACTTGTAACGTGCC
CTGCCCGGACGGCGCCAGTGAACGGTGCAGTGAGTTCTACGGCCATAGGA
CGGTACCAGGACGCGGTCACGTTCACCTGTGACCAGGGGTACAACCTGGT
CGGCTCAAACAGAATTACCTGCCAGGCGAATGGTGCCTGGAGTGCAAATC
CACCGACATGCAACCCTGCCCAATGCTCGGCACAGACGGCCCCGCAGTTT
GGATCGATAACGCCTACCGGACCAGTCTCGTTCCCGGGCACGACTACCTT
CAACTGTAACGCGGGATACACACGGAACGGCGCTACAGGTTCGACGTGCC
AAGCTGATGGATCATGGAGCAATCCTGTCCATTCATGCACACGCAGACAA
TGTCAGCCTCCGGTGACGGCACCGGTTAACGGAGCACGGGCGCCCGCTAC
CGGAGCGAACTCTTTCCAGGACAGAATCACGTTCACCTGTGAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:4017738..4024320 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97263_cuf14 |
| Biotype | protein_coding |
|
