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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97322_cuf6 >transcript:BL97322_cuf6-protein ID=transcript:BL97322_cuf6-protein|Name=transcript:BL97322_cuf6|organism=Branchiostoma lanceolatum|type=polypeptide|length=432bp
GGVDTLAVHHSQDLFEMTVVFSAYDDHSGLHTIHWELHDMADPAVVHGEG
QVAVRRPSTLHPECSPPLCTCIPKDEECYFRNHEFTPDANKMNISTGSHD
HDYYIVITVTNNAMLQSQGRFQITVDTSPPLPGHVHDSLPAETDLDFQQD
SVIQASWEGFFDRESGVIFYMYGFAEECLTLENVTQFGNNITVANTTSTH
AQWEATHPGRYHCTVIAFNRALEPSEPVCSDGVTIDVTPPIIADLSVDNL
HYTPGLIRDRDGDVWVIDSSGFRQPIVEPSPACRNVSREVDDVNLWPALD
LPSNGTAHPGYIDCDCLTIGPFSGNAYLSRENMLSLRWNGEDTESEVYDY
EVGLSSTLSPDLPDIMPFISTNAHPHFTTYHPNLDDGKQFYLVLKAINRA
QMSKTKVLGPFVVDVTPPAFSGLIEVTMEEQN Run BLAST on NCBI mRNA from alignment at Sc0000207:325350..328578- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97322_cuf6 ID=transcript:BL97322_cuf6|Name=transcript:BL97322_cuf6|organism=Branchiostoma lanceolatum|type=mRNA|length=3229bp|location=Sequence derived from alignment at Sc0000207:325350..328578- (Branchiostoma lanceolatum)
AGGGGGAGTAGACACTTTGGCAGTGCACCACTCACAAGATCTTTTTGAGA
TGACGTAAGATTAATTCTATTTACAAATCAAAGTCTGACTTTTCAATGTT
ATTGAACATTAAATGTTTTGTACTTTGCCCGAAGGCTGATTACAATTACA
TGTTAGAACCATAGGAAATATGCATGTAATAATGGATAGTGCTTAACCAT
GTTGTAACAAGAGGCTACATAAGTACTAGTATTGGCTCTATGCAGATGAA
TTAGGTTGCCTATGGACTCTTTTTTTGGAGACAGAGTAAGACGAAAAGTT
CCACTTTTTTTCTATAATTTGTCGGTTCGTACGTCTTTTGTTCCTTTTGC
TTAGGTTTTTATAACAATTAAGTGTTATCCATCTTTAGATTATCAATCCA
CGTCATGTCTCTGCAGAGTCGTTTTTAGCGCCTACGATGACCACAGCGGG
CTGCACACCATCCACTGGGAGTTACACGACATGGCTGACCCGGCAGTCGT
CCATGGGGAGGGGCAGGTGGCCGTCAGGAGGCCCTCGGTGAGCAAATGCT
CTAAACCTATTTCTAAAGTTTATAAAGATGCAAAATTACTTTCCTAGATT
CTATCTTCTGGTAGCTTCCGGTCACTACTACATAAATGGTATCAGAATAC
CATTCATGACCACATCCATTCAAATAGCAATGTTCTTTATTCACGACCAT
GCATTTACCATTGCCGACGTTTCGGCATATGTCACCTTACATCAATGCAA
TAATGACTGGTTCTACTTCAAATTGCAGCTAGGTATCGATGCTGCAGGAA
AAAGAATGCGATTCCGAAGTATTGCCGTAGTGAATAACGAAGTTTATTCA
GTCATTTAGTAACTTTTAGAAACTTATTCACGGAATTATCCATTTCTTTT
TCAATCGTTTCATGGAGTCATCGATAATGTACATACAGAATGTGCCTTTC
TAATATGCTATGATTTAGCTCCACCAGAACACATGGTTTGCGACAAGCTT
CGCTGCAAACATGAATCTGTCTAACTCTCTTCCACAGACTCTGCATCCCG
AATGTTCTCCTCCACTCTGCACCTGCATCCCCAAAGACGAAGAGTGTTAC
TTCCGTAACCACGAGTTTACACCGGATGCGAACAAGATGAACATCTCCAC
AGGTAGTCACGATCACGACTATTACATTGTCATCACAGTCACCAACAACG
CCATGCTGCAATCACAAGGAAGATTTCAGGTTTGTGGAAATTATCCTTAC
ATACATGCATTAGGTGTTTTTTCACCGTTTGTTATATGTTTTCTGCTTAT
TTTTGCTTCACTAATACTTTTATTACATAATCAAATTGATACGGTCAAAA
AAGTTGATATGGTCATGCTAGGTTATACTATATAATTCGTTTGTATTAAT
ATTGACCATGGTAAAATCGTAATTCACATCAGACCAACAGCATTGACTAT
GGCTAAACAGTACATATGAGAATGACAGTCTTTGCCACACAAGGCATCTA
TTAGCTGACTCTGCAAAGTTCGCTTCTACGTATCCGCTGTCTTCTGCGCT
GCTCATCAGTCTAGCTTGCCTGAAAAGTGTGCATCTGCAATCCATCCGGT
GCGGTCATGTGCTCTGTATTGATATCAAGAGCCTTTAAATCTTACCAAAG
ACACGGAATAGCCGTTTATCTTGTATTCCAAATGTTGCAGATCACCGTTG
ACACCAGCCCGCCGCTGCCCGGCCACGTCCATGACAGCCTGCCGGCGGAA
ACGGACCTGGACTTCCAGCAGGACAGCGTCATACAGGCGTCATGGGAGGG
TTTCTTTGACAGGGAAAGCGGCGTCATTTTCTACATGTATGGCTTTGCAG
AGGAATGTCTGACGCTGGAAAATGTGACTCAGTTCGGAAATAATATCACG
GTAAGATAACATGGCATCCAGTCTACCGTGGATTGGCCGGGCTGTCTTCG
GGCAGAAAGAGCCCTCCGCCGTCTGGGTAACTCTTGGAACCTGTTAGTAT
TTTTACGTGGTAAGACTTTGACTAGTCAAACACGGTGGTGGAAAGCTCCT
TCGGCCCCCAAAGAGGGTTACAGGTAAAAATGTGTTCAAGGAATAAGGGA
ATTCGAAGAAACGTTGGTACTAGTGACATTTAGAATGTGGGATGATTTAG
AATGGTTTTCGTTATTTCAATCACTGCCCCTCTCGTCGAAATGCAGGTAG
CAAACACCACGTCAACCCACGCTCAATGGGAAGCGACACACCCAGGTCGA
TATCACTGCACGGTTATCGCCTTCAACCGTGCCCTGGAACCGTCGGAACC
CGTTTGCTCCGACGGTGTAACCATAGACGTGACACCGCCCATCATAGCAG
ACCTGTCGGTCGACAACCTACACTACACTCCGGGACTGATCAGAGACAGG
GACGGCGACGTTTGGGTGATCGACAGTAGTGGTTTCAGGCAACCAATCGT
CGAACCGTCTCCAGCGTGCAGGTACAGAAATATTATAATTTTGAAAAGGC
TAAGAAACTTTAAAAAAACTCCTTCAGAAGCCAACTTATCGATCTACTTT
TCCTTTTGCATAAGGAATGTTTCTCGGGAAGTGGATGACGTCAACCTGTG
GCCTGCCCTAGATCTACCGTCGAACGGAACAGCACATCCGGGATATATAG
ATTGCGACTGTCTCACAATCGGCCCCTTTTCCGGCAACGCCTACTTATCA
AGGGAGAACATGGTATGGCACAGTCCTATCGCTTTTGTTTGCCATATTCT
TTATAGAGATCTGCAGTTTCAAAACCCATCTCCAACTTTTTTGATGAAGT
CGGCTTTAACTTTGTGTTATTATTTTTTTCTAACCAGTTGTCACTACGAT
GGAATGGTGAAGACACAGAAAGTGAAGTGTACGACTACGAGGTCGGACTT
AGCAGCACATTGTCTCCCGATCTCCCCGACATAATGCCGTTCATATCTAC
TAACGCACATCCCCACTTCACAACGTACCATCCGAACCTGGACGACGGGA
AGCAGTTCTACTTAGTCCTGAAGGCTATCAACAGGGCACAGATGTCCAAA
ACTAAGGTAGGCTTTGTTAATGTATCTTATGATATATGTATGGATCTTGA
TTGTCTTAGAAACAGCAAATGATTCAATCAACTTTCTCACCTTCCCACAG
GTTTTGGGGCCTTTCGTTGTTGACGTCACCCCGCCAGCGTTCTCAGGCCT
GATCGAAGTAACGATGGAGGAACAGAACG Coding sequence (CDS) from alignment at Sc0000207:325350..328578- >transcript:BL97322_cuf6 ID=transcript:BL97322_cuf6|Name=transcript:BL97322_cuf6|organism=Branchiostoma lanceolatum|type=CDS|length=1296bp|location=Sequence derived from alignment at Sc0000207:325350..328578- (Branchiostoma lanceolatum)
GGGGGAGTAGACACTTTGGCAGTGCACCACTCACAAGATCTTTTTGAGAT
GACAGTCGTTTTTAGCGCCTACGATGACCACAGCGGGCTGCACACCATCC
ACTGGGAGTTACACGACATGGCTGACCCGGCAGTCGTCCATGGGGAGGGG
CAGGTGGCCGTCAGGAGGCCCTCGACTCTGCATCCCGAATGTTCTCCTCC
ACTCTGCACCTGCATCCCCAAAGACGAAGAGTGTTACTTCCGTAACCACG
AGTTTACACCGGATGCGAACAAGATGAACATCTCCACAGGTAGTCACGAT
CACGACTATTACATTGTCATCACAGTCACCAACAACGCCATGCTGCAATC
ACAAGGAAGATTTCAGATCACCGTTGACACCAGCCCGCCGCTGCCCGGCC
ACGTCCATGACAGCCTGCCGGCGGAAACGGACCTGGACTTCCAGCAGGAC
AGCGTCATACAGGCGTCATGGGAGGGTTTCTTTGACAGGGAAAGCGGCGT
CATTTTCTACATGTATGGCTTTGCAGAGGAATGTCTGACGCTGGAAAATG
TGACTCAGTTCGGAAATAATATCACGGTAGCAAACACCACGTCAACCCAC
GCTCAATGGGAAGCGACACACCCAGGTCGATATCACTGCACGGTTATCGC
CTTCAACCGTGCCCTGGAACCGTCGGAACCCGTTTGCTCCGACGGTGTAA
CCATAGACGTGACACCGCCCATCATAGCAGACCTGTCGGTCGACAACCTA
CACTACACTCCGGGACTGATCAGAGACAGGGACGGCGACGTTTGGGTGAT
CGACAGTAGTGGTTTCAGGCAACCAATCGTCGAACCGTCTCCAGCGTGCA
GGAATGTTTCTCGGGAAGTGGATGACGTCAACCTGTGGCCTGCCCTAGAT
CTACCGTCGAACGGAACAGCACATCCGGGATATATAGATTGCGACTGTCT
CACAATCGGCCCCTTTTCCGGCAACGCCTACTTATCAAGGGAGAACATGT
TGTCACTACGATGGAATGGTGAAGACACAGAAAGTGAAGTGTACGACTAC
GAGGTCGGACTTAGCAGCACATTGTCTCCCGATCTCCCCGACATAATGCC
GTTCATATCTACTAACGCACATCCCCACTTCACAACGTACCATCCGAACC
TGGACGACGGGAAGCAGTTCTACTTAGTCCTGAAGGCTATCAACAGGGCA
CAGATGTCCAAAACTAAGGTTTTGGGGCCTTTCGTTGTTGACGTCACCCC
GCCAGCGTTCTCAGGCCTGATCGAAGTAACGATGGAGGAACAGAAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000207 | genome | Sc0000207:325350..328578 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97322_cuf6 |
| Biotype | protein_coding |
|
