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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97428_cuf8 >transcript:BL97428_cuf8-protein ID=transcript:BL97428_cuf8-protein|Name=transcript:BL97428_cuf8|organism=Branchiostoma lanceolatum|type=polypeptide|length=576bp
MWTIRLTLLLLCGTGVIGQNYQTLYMSGNCGSSFSLSDSGYISWSSSGNY
GTYEDCSVVFYTSDPATVISLQFTQVNIEACLDHLYIYNGAYYGTYTAIA
SEDVCNNNIPSEFVSNGNYITLRLTSDGSVGGTFTLLYTLYSGSWTGDSS
RIRLMDGTSANEGRVEVRMTSSSDWGTVCDDRFDMRGADVVCRSLGYPAG
ASEVRPSAGFGQGSGSIYMDDVACTGTENNLFDCSYSGWGIHNCGHGEDV
GVVCSVSAPATPSCSADYFQCSSGYCISSTLHCDGVSNCIDGSDENCENP
DPRIRLVGGSANEGRLEVRPEDSYVWGTVCDDRFDMNDATVACRMLGYSE
ATEVHGAENFGEGSGRIYMDDLECTGNETSLFDCPYAGWGVEDCGHYEDV
GIVCASEGLSGGEIAGIVVGVLVGIVMLTVILHNCNKSNSNTSSTNRVDP
NRGQTNNTMVHRPEAQNPPVAPKPTTLTQPPLPPIPAAHQPYPPSQQFPP
PPAYSSALMMPTQPPGAPVPYPPPYPNHDPAYAPQPTEGAQPQPPSILYP
PPDSSVPPAPRYLPPLTSPPQLPSPY Run BLAST on NCBI mRNA from alignment at Sc0000055:1065095..1072181- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97428_cuf8 ID=transcript:BL97428_cuf8|Name=transcript:BL97428_cuf8|organism=Branchiostoma lanceolatum|type=mRNA|length=7087bp|location=Sequence derived from alignment at Sc0000055:1065095..1072181- (Branchiostoma lanceolatum)
AACAATAGTTGACTTCGGAGTACGAGTACGGACAAAGCTATTTCTACTAC
TTTCATGATGTGAAAGACAGTGTTTAACGCACCTTTGCCGTCATGTGGAC
TATAAGACTGACGCTGTTACTCCTGTGTGGAACAGGTGTGATCGGGCAGA
ACTATCAGACATGTGAGTAGTCGCCATTTTTGTACCCGACACGGTCCAAT
GGCTGCACCTGGACGCAATTTTGAACATGCATGTTGTGTAGATCAAAGAG
TTCCTGGTCAATGCTACGCCGATAGGGACGTATGTACAGTAGCCAGTTTA
TCTACAGGTCAGAACTCAGTGAGTCAGTCTTTTAAGAGAAACAGGCTTAA
ACAACTTGAAACGTAAAAGTTGGTTAGTTTGTTTGCTGTGTAAATTAAAG
AGTAACACTGGAAACAACAAAAATATTGCGTAGCAACATAAACGCCTGTA
CTAGCACAATGATACATTTTGCACATGTAACGTGATGAGTTGGAAACTGT
GATTGCACAGCTTAGAAAATGGCCGTTTGTATGGTATGCNACAGCTTAGA
AAATGGTCGTTTGTAGGGTATGCGCCACCTTGGACTCTTTTATTAAGCCA
GGTATGTCACTTTGGTTTACAGTGTACATGTCAGGCAATTGTGGGTCGTC
CTTCTCCTTATCTGACTCCGGCTACATTTCATGGAGCTCTTCTGGAAACT
ATGGGACCTACGAAGACTGCTCGGTGGTCTTCTACACCTCCGACCCTGCC
ACAGTTATATCTCTACAGGTGATATAATTGTACAATATCACAATACAATA
CTAATACTCAGCTGTATTCAATAGATTCGTTTTACACGTGGTTGGCAAAT
GGACCTGTAAAAATGTAAAAGAGACAGGATACGTTCCATTTCTATGTTTC
TGCTGCTCGCTAATTAATCTTTTTATGACATACTCCCCTAATTGAAGTCA
TGTTGATTTGAAACACTTACATACCGATAATGTCTATTGTTTTTTTCTTA
CAATGTAGTTTACACAAGTGAACATCGAGGCTTGTCTTGACCACCTGTAC
ATCTACAATGGAGCGTACTACGGCACATATACTGCTATTGCAAGTGAAGA
TGTCTGCAACAACAACATTCCCAGCGAGTTCGTCTCCAACGGAAACTACA
TAACCTTACGGCTGACATCTGACGGGTCTGTCGGTGGGACGTTTACGTTG
TTGTACACGCTGTACTCGGGGAGTTGGACAGGTAACTTTGTTCTTTCTCA
AATAATTTAAATCACTCACTTTTTCTTTTCATTCGTTTTGTAATTCACTT
ATTCCTTCATCGTAGCATAATCTCCAACTCGGGTTGCAATAAAAGCTATT
TTTGCCAGTTGGATACGGTCTTTGCAACCGTTAAATCTGCTTGGAGATTA
ATTGTAGCACACAAAAGAAGAAGTATGACATGTCTGTCACCGGCCGAGTC
AAGGTCATACACCAGTGAAACTTGGAAAGGTAACTTCCCGCTAAGGTTTA
TCCTACCAGACAATGGAGATATAATACCGTCCTTTTAAATTTCTTCAGGT
GACTCCAGCAGAATCCGACTCATGGACGGTACAAGTGCTAACGAAGGTCG
TGTGGAGGTCAGGATGACCTCGAGCAGTGACTGGGGGACAGTCTGTGACG
ACCGTTTTGACATGAGAGGTGCAGATGTGGTCTGCAGGTCACTTGGTTAC
CCAGCTGGCGCCTCAGAAGTTCGTCCTTCCGCTGGCTTCGGTCAAGGTAT
GAGTGTCTTCATTTTGTCGCTGAGCTATTGTCAGTTGTATGCAAGCAAGT
TGCGTACGCGTATTGGCGGTGTTTCAGGGACGCACCAAACGGCATATTAT
GTAGCTAGTTGACAAATATTCCGGGAACTCCACGAATTCATCTGAGGAAT
GTGTGGACTGTTCCGCGCATGCGTAGTTACCATCTAGAATCCCGTAGTAT
CAGAGCTAGTTCAGATACTACCTATACGGAAGGCGGATTACACTACAGAC
AAATCATAAGCCACTGTCTTGGCTCTCTGCCCAAACAGAAGATTATCAGA
CTGGTGAACACCAGTTATAACTAGAGTTCCACGACCTCATACCTTCGCCA
AATGATTTTAACCTTTATGACTGACGTGTAAGGAGTGTTTGTCATCAATT
ATAAATCATACCAGTTGGTCGTCTTCACCCAAGAGCTTAAAAAAGGTTAT
GCGACCATATATAATCAATTATGCAAATAAGGTCCTTATTAGCATAATCT
GATTCAACGATGTTCACATTCACATAACTTCCAAATGCCACAAGTATGAA
ATTGCCATCATTTGCCTGTATGGAATTCTAGTAGTTTCTCATTAATTATG
CAAATTAGGCCTACAATTGCATATTTTCTATCTATCAACATTCCTCTCTT
CCTCAGTTACAAATGTCACATATTTGAATAGTCAGATCATGGAACACAGC
AGTTTTTTTTAAATTGTCTCATTAATTATGCAAATTAGAATCTGATTTGC
ATGATTCTCATCTAATCTTACAAAGTATCACCTAAGCTATCTATATACCG
AAAATCATGAACATCCATCAAGCCAATCTTGAGTTCTAGTATCTTCTCAT
TAATTATGCAAATGAGGTCCTCATTTGCATAGTTGATATCTATTAATATT
TCTCGCTTCCCCAGTTACATTTGTTACATGTTTGAGAGTCCTATCACGGA
ATTTCGCGGCTGTATAAACTTTCCTTATTAATTATGCAAAATAGATGCTG
ATTTGCATAATAAGTATCTAATCATGTACATCATCACTCAAGTTATCTAC
TAACCAAAAATCATGACCATCCATCAAGCCCTTCTTGAGTTATTCCCTTT
CAAAGGCTGAAGCAAAACCTGCTCCTGCAGTTCCAAAAAAGCTGCTAGGT
GGCCAAAACCTATACCACTTACTCTCTGTCCAAAGAGCTATCTACCACTC
AAAAATCAGTTCCATAGCTTGTCCAGAACACGAGATATCAAAACAGGAAG
TTCCGCTGCAGTACCGTATCAAGCCGGTAGGGGACCCAAAATCTAATCAT
TTCCAAGTCTCATCAAGACCTACCCACCTACCAAATATCAAGACAATCCA
TCCAAGCCTTCTCGAGTTATGCTGTACGTTACAAACACACAAACACACAA
ACGCTACCCTCTGCATAACCTTCTCGGCGAAGGTAACAAACATTCAATCG
CCGCCATGAATTCACATGAATTCCAGATAGGAAAACCCAGAGGGGGAGCA
AAGTTTTACATACCCGTGTGTTTTGACTGTAAATAATCTATATCCAAACT
CTTGATGAAAACATGTATTGTTAGAAACATTTTTGTCCATTTTTACCGTC
ATTTGTAGGTTCAGGGAGTATCTACATGGATGACGTTGCATGTACGGGGA
CCGAGAACAATTTGTTTGACTGCTCGTACTCAGGGTGGGGAATTCATAAT
TGTGGCCACGGTGAAGACGTCGGTGTCGTTTGTTCCGTCTCAGGTAAAAT
GCAATTTTTGACTAAGTCTAAGACTTTATCATATTAATAGTTAATGCAAA
CAGCAGCAGAGCACAATCTGTTGAAAACAGATATCAAACTAATTCTGAAA
CAGTACTAATTCTTCTGCTATAGCTAGCTCTTTTAGAATGAACAATTGGG
AGAGGGGATGAAGGAAGAATATAACAGGATTGTCGGTAAGATTAGTATGA
TTGGAGCAATTTCACTCACAAAAGCTCTTTTAATATTTCACAGCTCCAGC
CACACCAAGCTGTAGCGCAGATTATTTCCAGTGCAGCAGTGGTTACTGCA
TCTCCTCCACGCTGCATTGCGATGGAGTCAGCAACTGTATCGATGGAAGT
GACGAAAACTGCGGTACGTAGCATTTCATATGAAAACAAAAAATCATCAT
GTAAAGGAGTTACACAGATTACATTCATTTCTAAAAACAATATCTCGAGG
CTGACAGTAAATATTTTTCCATCCTCATCGAGATCAGAGCTCGGCTTTCT
TATATCCCTTCTAACCTTTATGCTTTATCTTTAGAAAACCCAGACCCCAG
AATTCGGTTGGTTGGCGGTTCAGCCAACGAAGGCCGCCTGGAGGTTCGAC
CGGAAGACAGTTACGTCTGGGGGACGGTTTGTGACGACCGGTTTGACATG
AACGACGCGACTGTCGCCTGTAGGATGCTGGGATACTCTGAAGCAACTGA
AGTCCATGGTGCTGAAAACTTTGGAGAAGGTACGAATGCTCTTGACTCCC
TCCCTATCAAGTAGTTCATATTTATTCGGGGTCGTGTGGCGCAACGGCAG
AGCGTTCGGCTCAGAACCAAGAGGTTCTGAGTTCGAATCCTGTCGTGTCA
CCGATCTTGTGCCCTTGGGAAAGGTACTTTACACGACTTTCCTCACTCCA
CCCAGGTGTAAATGGGCACCTGACTTCGGTTGGGGAAGGTCGTATTGAGG
TCACCTGGTGGCGCCGAATGGTAGCCGCCCAGACCCTTGCGACAAATCCA
CAAAATGCAAGTATGGATAGATTAGGTAGATGTTGTGTATAATGTGAAAC
ATGTAAACCCTGCATCAATTCAGCGCTAAAGGCTGCCATTGCGGGTAATT
TCTGACCAATAAAAACCATTAAAATTTTTTTTACGTAATATGGCAAACAA
TATAGACAACACTTTTTTGAAATGGAGATCCACGTCCATTACAGAAGGGT
ACCGTCATGTTACTATGTTTATAACACACAGGTTCGGGACGCATCTATAT
GGACGACCTTGAGTGTACTGGGAACGAGACCAGCCTGTTTGACTGCCCGT
ACGCAGGTTGGGGAGTTGAAGACTGTGGTCACTACGAGGACGTCGGTATC
GTCTGTGCCAGCGAGGGTGAGATGATTTTTCCACACTGAACATTAACGAA
GAACTACTAATACAGTAATCCGAATCATTATTAACTGTCGCTTTGTATTG
TTAGAAAAATTGTGTCTTTCAAGTTTCGTCGTTGAAGGATGACAGCTTCT
GCCAACCTTCTTAATCTTAGCATTTCCTTACAACAGCAAACTAACACGTA
CAAACATTGACATAATTACCCAAATGACTATCTACACTTGTTTTCTGCAA
TAGTTTAGATATAGAAAGTTTATTGCAAATTCCTGCCCGTAGGCTAACTG
CAACTACATGTACATGTACATGTAACACAGAGTGGACGGACAGACAATAG
TGAGCAGTTTAACATGACATATGCATATGACTACTATAGTTTAACCACTG
ACACTAAGTTCTAACTTATTGGGTTCGGCGTCTATTAGCGAGACAGTGGA
AGACGAATGATCCCACTTTTTCTGTAATGTGTGGGTTTTGTGATGCTAAG
AGGAGAGTAGTTTTCTTTTCATCTGAAAACGTGGAGAAATTGGGATGGAA
AATGGTGGCTCCTTTAATTTCTTTCGTGGTCGTAGAATGGGCAACTTGAC
ATGGAATGTGTTTCGTCTTCCACCTCGTTTGACATGCAGTATATTGAAGG
GACTAAATGTAACATGAGAAGATGTGAAAACCACATGTGAAGTAGTAACG
TTCACTTTAAATGTTATCACAAAGTATAACGTTAACAATGTTGTAATTTG
AATGATTACTATGGGCCAGTAAAACATATTATGTGGTAACAGTACTGATT
ATGTTGTTATCAGGGCTCAGTGGCGGCGAGATTGCTGGAATCGTCGTGGG
GGTGCTGGTAGGCATCGTCATGCTAACAGTGATCCTCCACAACTGCAACA
AGAGCAACTCAAACACATCTTCAACCAACCGGGTCGATCCGAATAGGGGG
CAGACGAACAACACGATGGTGCACAGGCCAGAGGCTCAAAACCCCCCAGT
AGCGCCCAAGCCTACTACACTGACACAACCTCCCCTACCCCCCATACCTG
CCGCGCACCAACCTTACCCACCCTCACAACAGTTCCCTCCCCCTCCGGCC
TACAGTTCAGCTCTGATGATGCCTACACAGCCGCCGGGTGCACCCGTACC
CTACCCTCCGCCCTACCCCAACCACGACCCGGCGTATGCCCCTCAACCTA
CAGAAGGAGCCCAACCGCAACCTCCCTCCATCCTGTACCCACCCCCAGAT
TCATCCGTCCCCCCAGCACCAAGGTACCTGCCCCCTCTAACCAGCCCACC
TCAACTGCCTTCCCCCTACTAAGTCTACATGTTCCTGTACATGTATTAAA
TGGATATATACACGTGACAAGTATTTGTAAGTATAGATAATGCCAAACAA
TATACAATGTGGCAATGCTTAGCTTGATTTGTTAATCAATTTTTTTCATG
TGTACATTTATTGATATTGCGATCCTAGATCATGTAAAATGTTTGAATGT
TGTATGATACATGTATTGAAGAGAAGTATACGTCTTGCACAAGGTTGTTG
ATGTACCGTTACATGTACATATAAAACTGGGAGTGAGTTTGATGTAGTTA
TCATCAGTCGACTTTTATCAACAAAGAAGAGCTGTTTGTATCAAAGGCAA
AGGTATTTTCCCACCCACACATGACAAATGCTGTGAAACACTTATTCATA
CATATATATATATAGTTTTAACTTTGTGGAAGCTACGAGTAGATTCTTAC
AATGTTGGACTTGCTGGAAATATGATGAAAGATAAAGGACAATATGAAAT
ATTGTATATATGTATTAATTCTGTATACGTAGTTTTGGGGTGAATGTAAT
TTACCGGAATTAAATCTTAAAGCCTGTCAAAGTCTGTAGACATATTTGCT
CAAATTGGTATAATGGATTCAACTCTGCGAAACGTTCTGTTGTATATAGT
TACCAGGAAAATCTACGATTTTGTATTTGTAAGCACATTGATGCTTTTTA
ATGCTTTTCAAAGACTCATTTCTGTATATTAAAACCAAGCCAATGTGAAG
AAAATTGAACTCTGTACAGTGTGATTAAGCTGAAATGAACTGATGTTCTT
TTTAAAAAAAATACAGGGTTGATCTTGAACAAGTATGAACAATGTTGATA
TTGACTTTAAGCTACGACTCGAAAAACAAACGATGGGTGATGTAGAAAGC
AGTATTAGTGGGGTCTGGTTTCTAAAATAACTCATAG Coding sequence (CDS) from alignment at Sc0000055:1065095..1072181- >transcript:BL97428_cuf8 ID=transcript:BL97428_cuf8|Name=transcript:BL97428_cuf8|organism=Branchiostoma lanceolatum|type=CDS|length=1731bp|location=Sequence derived from alignment at Sc0000055:1065095..1072181- (Branchiostoma lanceolatum)
ATGTGGACTATAAGACTGACGCTGTTACTCCTGTGTGGAACAGGTGTGAT
CGGGCAGAACTATCAGACATTGTACATGTCAGGCAATTGTGGGTCGTCCT
TCTCCTTATCTGACTCCGGCTACATTTCATGGAGCTCTTCTGGAAACTAT
GGGACCTACGAAGACTGCTCGGTGGTCTTCTACACCTCCGACCCTGCCAC
AGTTATATCTCTACAGTTTACACAAGTGAACATCGAGGCTTGTCTTGACC
ACCTGTACATCTACAATGGAGCGTACTACGGCACATATACTGCTATTGCA
AGTGAAGATGTCTGCAACAACAACATTCCCAGCGAGTTCGTCTCCAACGG
AAACTACATAACCTTACGGCTGACATCTGACGGGTCTGTCGGTGGGACGT
TTACGTTGTTGTACACGCTGTACTCGGGGAGTTGGACAGGTGACTCCAGC
AGAATCCGACTCATGGACGGTACAAGTGCTAACGAAGGTCGTGTGGAGGT
CAGGATGACCTCGAGCAGTGACTGGGGGACAGTCTGTGACGACCGTTTTG
ACATGAGAGGTGCAGATGTGGTCTGCAGGTCACTTGGTTACCCAGCTGGC
GCCTCAGAAGTTCGTCCTTCCGCTGGCTTCGGTCAAGGTTCAGGGAGTAT
CTACATGGATGACGTTGCATGTACGGGGACCGAGAACAATTTGTTTGACT
GCTCGTACTCAGGGTGGGGAATTCATAATTGTGGCCACGGTGAAGACGTC
GGTGTCGTTTGTTCCGTCTCAGCTCCAGCCACACCAAGCTGTAGCGCAGA
TTATTTCCAGTGCAGCAGTGGTTACTGCATCTCCTCCACGCTGCATTGCG
ATGGAGTCAGCAACTGTATCGATGGAAGTGACGAAAACTGCGAAAACCCA
GACCCCAGAATTCGGTTGGTTGGCGGTTCAGCCAACGAAGGCCGCCTGGA
GGTTCGACCGGAAGACAGTTACGTCTGGGGGACGGTTTGTGACGACCGGT
TTGACATGAACGACGCGACTGTCGCCTGTAGGATGCTGGGATACTCTGAA
GCAACTGAAGTCCATGGTGCTGAAAACTTTGGAGAAGGTTCGGGACGCAT
CTATATGGACGACCTTGAGTGTACTGGGAACGAGACCAGCCTGTTTGACT
GCCCGTACGCAGGTTGGGGAGTTGAAGACTGTGGTCACTACGAGGACGTC
GGTATCGTCTGTGCCAGCGAGGGGCTCAGTGGCGGCGAGATTGCTGGAAT
CGTCGTGGGGGTGCTGGTAGGCATCGTCATGCTAACAGTGATCCTCCACA
ACTGCAACAAGAGCAACTCAAACACATCTTCAACCAACCGGGTCGATCCG
AATAGGGGGCAGACGAACAACACGATGGTGCACAGGCCAGAGGCTCAAAA
CCCCCCAGTAGCGCCCAAGCCTACTACACTGACACAACCTCCCCTACCCC
CCATACCTGCCGCGCACCAACCTTACCCACCCTCACAACAGTTCCCTCCC
CCTCCGGCCTACAGTTCAGCTCTGATGATGCCTACACAGCCGCCGGGTGC
ACCCGTACCCTACCCTCCGCCCTACCCCAACCACGACCCGGCGTATGCCC
CTCAACCTACAGAAGGAGCCCAACCGCAACCTCCCTCCATCCTGTACCCA
CCCCCAGATTCATCCGTCCCCCCAGCACCAAGGTACCTGCCCCCTCTAAC
CAGCCCACCTCAACTGCCTTCCCCCTACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000055 | genome | Sc0000055:1065095..1072181 - |
Properties
| Property Name | Value |
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| Transcript id | BL97428_cuf8 |
| Biotype | protein_coding |
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