XLOC_003173 (gene) - C. hemisphaerica

Overview
NameXLOC_003173
Unique NameXLOC_003173
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000054:479052..482787+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003173 ID=XLOC_003173|Name=XLOC_003173|organism=Clytia hemisphaerica|type=gene|length=3736bp|location=Sequence derived from alignment at sc0000054:479052..482787+ (Clytia hemisphaerica)
TTCGAGAAAGTTTTCAATATTGTACAAAAACTGTGTTTTCAGTTATAGTT
TCCCTTTCATATCATTAACTGACATTTGACGCACAGTACGCACAATTGGA
CATGTTGTTTCAGTACGTAGCTTTTCTAGCAGTTTGTGCAGCGTCAGCAT
CTCCTAATCCATGTCTACATAAAGGATGCCCTTTAAAGGGAGGTAAGctg
atttttatcatttttcaatcATCTTCAATTACCAAAATCAAGCTTGTAGA
TTGACACTCTGAAAATAAgagaattttcaaataattttaacTAAATTGAA
NatttttatcatttttattctTCAATCACCAAAATCAAGCTTGTAGATTG
ACACTCTGAAAATAAgagaattttcaaataattttaacTAAATTGAATAA
TGATAAttatgggccattccatttcatGCCCATACAGGGCGgaggacgaa
catttccagggggtatttcgaagaagaatttccaggcaGTCTAAGGGAAG
ATTTTAGGAGGTAAAAATTTATACTAAATTTTCCAGGGAGTAAAAGACTG
actttagttcgtccaccctcactttttagtatgaaaatttttttgagtct
tttggcaaattttgctattttccagGGGACATCCACGTATtatttttggc
ttgaaaaggtttgtccaCTCCCTCATGTATGGATTTTAAGAAACAGTCCA
ATGACATTTGTCAGAAATCTGTTAGAAAGAAAATATATGTatttagaaaa
ttcaaaaatagaaatcacaaaaaaattgggccgaaaaaaaaatcctaaaa
aagaTACCTTAAGTGAATAAAATTAATATTTGAGGGGACTATTTCAGTTC
AAGTCCCAATTTACCGATATTACATTCATGGCAAATTTTATAAAGTTGAT
CAATCGCCAAATTTGATCTCCGTCAAAAATAATGTTTGGGGAACTGGCCA
AATTAAATTCACGCTGGGATTAATATCTATTTAACTGTATTTCATAAAAT
CATCTTTTTTTAGGTCTCAATCTTCGAGATGTAAAACGAATGACATCGTC
GCGACCAAATATTctaaacaatagcaacaatctCAATATTTTACAATGGA
ATATTCTGTATGATAAAGTCAAAAATACGTCGGATAGTTGGTTATTCAGA
AAAGACTTTGTATGTGATTATATTAATGCTGTAAATCCTGATGTAAGTAT
ATACCCTCGTTTTTCgcctttttcaacttttttgaaaagtaatgttttaC
CATTTcgaccataacttttgatctagtagaccaaatttgacaaatgaccc
ctcataatttaagtttatCCTTTCTCTTTCCAAAACCAAAAGATTGATTC
CTTAACAGTTgatagagctcgagaaaattcactttaaagagGGAGGCTTT
TTTCTGGAACGCCCAGTAACTTCAATTTCTAAGTTAAAAATAATACACTA
ATGCCTTACAGCAATCATCAACCATTGCATTATTCTTTATATGTTACCTG
CATTTTCCCCGGCTGATACCCCTGGATTTCAATTATCCTTTTAGGTTGAT
GAATGTTAAAAAGTAagattttagccgtttttgcaaaattcaatgaaaat
cctagcctagaaatctaagctagtttgattcattcaccaggataaatctg
atggtaagtaagttgtgactgaataacactatcaaaggcaaacttaaaat
cagtaaatatgaaaaatctttaaagcgccgataacgctatattgccataa
gccgtgtgtcctagctttgtgaatacgggcttagttgaCTAGGCTATGAA
AATCTGTGCTTAAATCAAAATGAAAGAattgtaaaaaatctttcttgCGA
AATGCAATTCGAATGCTCTTTCATTTGCAAACTTTCTTCTTGCAAAATGT
ATAAAAATTCTCACCCTTAAATTAACCAAATCTAACCATAGATCATGGGT
TTACAAGAAGTTATGGAGAGCCAACTTGTTGAGCTTCAACAATGTCTACC
ACACTATCACATCTTTGGTGAGCAAAGAGATTCTGTTCCCAATGCGCTGT
ATAATCCAATCTTGGTCAAACGATCACCAAAGATGAGAGTCACACGTACT
GGAACCTTCTGGTTAAGTTTGATACCAGATATTAAAGGTTCAAAAGGTGA
GGATATATATGAAAgtttagtctgaatcgcagccctctatagatatactt
cctatctataagaaacttttttcgctaggaggatgagcagaagcctacta
GCCAAAGTTGTAACATccatgtgtcacagacccgatgGGACCCCTACCCC
ACTAGAAAATTgggcaaaatatttaatatatatCCCACAGTGGGAAATTG
ACTTATCCTTTTCGTATATACCTTGAGTATAAACTTTGTTAGTATtcgac
ccttggacccttaccgggactaaaaaggagaaaacaaagaaaattttgtg
aatattacgacccttattgggacaaatttgaccaattttgaccaaatttc
gatccttccggtggtaaaaagttgaaattttcctatttctccgaccctta
gtggggctttggaaatcaaaaaaggtacccttaagggcggaaCATACCGT
ATCCTCCATttgggtaaaaaaaaattcaaaacttcgtATTTCTTAAGCTC
CANCACATACCGTAACCTCCATttgggtaaaaaaaaattcaaaacttcgt
ATTTCTTAAGCTCCAACTTCCAAAGAACCTCGAATTTGCACATGGGTTGA
AATTGACAATGGTTCCACAAAACCATTCATCGTTGCAACAACTCATCTAG
CATGGCGATCACAAAAAACTGCTGCAAATCAAATCTCAATACTTATCCAA
CATCTTCAATCAAATATCCTTCAAGATGCCAAACAACCACTTGTGGTAAC
AGGTGATTTCAATTGGGAAAGTAACTCCACAGTATATACCACCATGAAAG
AAGCTGGATTCTCCAACACCATGCTTGATTCTCAGTTCGTATTCCCAGCG
CTGACAGCTCTTCCACCTTATCCTGGCTTAATTGACTACGTTTGGCAACA
AGGATTCAATAGTCTTTTCTCGGCTACTTTGATGGACAATCGTCCAGATA
ATGGTCGTTATTTATCAGATCACAGACCTGTTTTGGCAATTCTTAGGGTG
TAAATAGGAATATTATGTTTCCACCATTTCTAATACAGCTTAAAAAAGTA
TCTTTTAAGATCAATTTGAATGTGTCATGTAgtattttgaagtattttga
tacacccctgtgtcacaaacccgctgggacccctaccccactggaaaatt
taacgaaaatttcgtccccggtgggaaaataccctggaattttagcccca
ctggaaaatttactttgttttcatccccactcgaaattccatgtttacaa
attgcacttcaaaacNAAATACCCTGGATttttagccccactggaaaatt
tactttgttttcatccccactcgaaattccatgtttacaaattgcacttc
aaaaccatcgccactttttaaccttggaacaatagaatttctattcccat
tgggatttcaataggaatttttatccccattgaggaaAAGAGTTCagtcg
gggctgtgagacaggagtgtttTGATATCTTGATCACAAGTTATTAAGCT
ACAGTTTGATGNtcggggctgtgagacaggagtgtttTGATATCTTGATC
ACAAGTTATTAAGCTACAGTTTgatgaaaaacagaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005589TCONS_00005589Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000054supercontigsc0000054:479052..482787 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.55	1.39	1.18	0.71	0.41	0.35	0.85	0.86	0.56	0.48	0.7	0.2	60.55	67.23	32.57	57.02	8.32	12.42	95	74.45	72.08	75.6	31.57	47.25	106.07	99.15	0.77	1.12	16.06	18.92