XLOC_003181 (gene) - C. hemisphaerica

Overview
NameXLOC_003181
Unique NameXLOC_003181
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000054:712246..717396+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003181 ID=XLOC_003181|Name=XLOC_003181|organism=Clytia hemisphaerica|type=gene|length=5151bp|location=Sequence derived from alignment at sc0000054:712246..717396+ (Clytia hemisphaerica)
tttacggcacttacaaccaatcagctgttgggtccgtgatgtaatgtcag aagacattgcagtggtgcatatcacgaatagatcttatcagagtttttga tttttcttaaagagcgatgcattgtgggattgtttcggggtattacaata gaaattacttaggaattcctcgatggaattttattgtaatacccccaaaa caatcccacaatgcatcgctgttttagaaaaatcaaaaactcggataagg tctattgaaagAGTGATGattttacagataaaaaaaatgtgGTATTTTCT ATTGCTAACAAAAGTTGCATTCGTGTATTCTCAATGGTACTTGGgcgaag aaaaacaacaaacaacaacaaatattGATGTAGAGGATGCTTCAAAACCT GTCCCTACAAAATCAGCAATCCAATGTATTTTGAAATGTCAACGAAGACT AAGGGCGAGTTATTTTGTGGAAAATACCAATCAATGCTTTTGTGTTTTGA GTAAAAATGACAAGTTGGTTTCCAATGAAAATGGAACTTTGAATGGCACT TTTTATGAACAGAGTGACTTGGAGGTATAGTTATTTTATCTTAAGTCAGG CCAATCTAATTAAAAATATAGGGGAATTTGATGAAAATAGAGAAATGAGT TCACGTATTGTGAAACGGCCAGCTAGAGTGATTACTTCTATTATCTATta acttttttcgcaaaaatcaatCTCCTCGCAAAAATCTATCCAATTGGGTA GCAacataagaaaaaaattgatactttAACGGTGGTGCTCTGTTTGTGTG GGACTCCGAAGATGACGTTCattagatttagaacgccatggctCCGAGCC GTTCAAAGATAAAGAGTCACTTTCTTTAGCGACCAAATTCTCATTTTTGT CTAGAAATGCGTTGCAAAGACGTGCGAAGAAGTGAAAACAATTTGCCCAG AATGCGAACCCGATTTTTATAATCTGGAAATTAATGGAGAACAAACAAAG AAGTTTTGTGATTTCGATTTCAGAACACCAGAGGGTAAGAAGTGTCTTAG CTTGCAGAAAAAGAGTGNcaaaaaaataagcacatccaggctcagccaaa ttttagatgttctaataaaaaaaaaacgtgtacctttgTATCTGATATCt gattttctcctttttttcccGGACACCCTAGTATATATTAAACTAGCCGT ATCGCTCTGTTGGGAGTTCAATATTATCATGGCACCACGCCCCCAAAAAA AGGGATGGATgtagaaagttttaaagctcaaaatgtctgatatttttatt ttcgaacCCATccgaaattttaaacttttcaagCATTGAGCCTGAAaaag ttcttaaattgttcttacttCCACCGTATTGCGAGTATTTTGGGTGTTAT AGAATATGAAAACCCTTAAAATGTttataacttgttcttaatattttgac catcgaagcttCATGTTcttacatacacgtttttttatgaggaACCTTTA CTTGGTTCCAAGCCTGAAGTTCCTTATTACTTAGACTTAGCTGTTAAGAT TGGATTTAATAAGCATGTAACTTATGTATAAGTATAACAATTGACTACAG CACAGAAAAAGACGTTCGTTGAATGTTGTTtcgtcaatatttttttatat ttttgtttaggTTTTTGTAAATGTGTGCAACTTCAAGTATAAATTCTCTG TTCCTtaacttgttttctttttctccgCCTGAGCatttccttaacaattc cttatttttaggatcattttcagcctcaagttcttTAGAAACGTGTTCCT TGTAAAAAAGACGTGTAGtctgttcttatagaaaaaggtGTGTATTAAGA AAGCAATGATGGTTCGGATATGTTACTTTATAGAAAAATTATCATCGTGT TTGGATGTCTGTGCGCAAACATGTTCGAGCGACGCCTACCGTACTGATAA GGTAAGATGTCTTCACTGTATTTCATGTGAAAAGAACAACGCATTTTAAT AGCAGGAAAAAATATACCATTATAAAAATAGTTAGTTGcacagaaatttt tcaaaatatttttgtgcattttatgatgatgatgaggtctaatttcatta aaaaagggGAATGCAGTGGGATTCCAAAGGGTAGTCAAATCTCCATCCAT CCTTTAACGACCGATGACGAAATATCTTGTCATTGTCGCGTTCCATGCAT GACGAGATATCTCGTATGCGGATACTGTCCCAAGTATACCAAAAAAGTCC AGCTAccaaagcaaaatatcaaaaattgcaaaaaaaaggtATTGCTTATT TTAATCATGCTGATATGagtcttttttataattttcccgACCATTTTCTC GATGTTATTTTATCCctgacaatttttttaatataaatacCCTTTTATTA ACAGCGACTCTTTCCCCAAAATTCCATGTTTTTTGTTCTTGTCTCGCAGT CGGGAACCCCTAAAGTACTTTCTGCCGAATTATTTCGTCATTCAGTCTTT TTTGCACGGCTCGCGAAAAACCGCGATATTTTACCAGCCCACCTGCGAAG AAAGGCTCTGTATTTTTTTGAGCAGTTACTTCAAAAGGCCAAGGTATTTC AAGcacggaaaaatgaaagacGCAGTCGTTAGAGGATTAAAAATATCTAT ATTCAACGGAggtaattatttcaaaataaacagaaaatcaaaaaaccagT AACATTTGAAATACTTATTTTTTCAAGGGTTGTGCTCAAGTGTATCATTG TCCACATGGTTGTNtcttttttataattttcccgACCATTTTCTCGATGT TATTTTATCCctgacaatttttttaatataaatacCCTTTTATTAACAGC GACTCTTTCCCCAAAATTCCATGTTTTTTGTTCTTGTCTCGCAGTCGGGA ACCCCTAAAGTACTTTCTGCCGAATTATTTCGTCATTCAGTCTTTTTTGC ACGGCTCGCGAAAAACCGCGATATTTTACCAGCCCACCTGCGAAGAAAGG CTCTGTATTTTTTTGAGCAGTTACTTCAAAAGGCCAAGGTATTTCAAGca cggaaaaatgaaagacGCAGTCGTTAGAGGATTAAAAATATCTATATTCA ACGGAGgcaattatttcaaaataaacagaaaatcaaaaaaccagTAACAT TTGAAATACTTATTTTTTCAAGGGTTGTGCTCAAATGTATCATTGTCCAC ATGGTTGTAAAATGAGAGAACTTGGATTAGCCGATCTCGAATGTAAATCG AATTGTCAACGAACTATCAATTCAGGGTGCAGCACTATTGTCAATGGTTG GGTTTTTAATTTATGTTCATCATGTGGGCGCGATGGCTGCTCATCTAATA TGCCCGCAATCACCGAATGTGAAACCGGTTGCACTAGCTTTTAGAATCAA TCCACctatttttttttctgtaagaACAAATTGACTTTTTGGCGTGGATT AGGAACTTTTAatattgttcttattaaaaacattataataataaaacaaa ggtactctcgggtatctaatagacgggggtttggaataagtaGGGGGGTT GGAACAGATTAATAagagggggggttggaataggaatgtcctgggtggaa aattttcgaaaaattaattagcggcccCCGGCTatcaggtacccgagagt atatgAGCGCTTCCGATCGGCATATAAGTGTCCGATCCATCATTATGTGC CCCCCCATGCAGACATTTTCTTTCTACAAATACTAAACCTCCAAAGCTTG GGAAAATTTCAACATCCGAAAGGTTTATTTTGCGAGGGGATTGTCGGTTC TAGCTGCATTTCTTCAGTATTTACGGATTAGAGCGGTTTAGCACAAAAGG GGATGCAGAATATTAAAACGCGACAACCATTTCTCTCCGATGCAAAATTG GCCATCTCCTTTAGAGTTTTAGCGGGGCGGCCGAAAATTCGCCATAGGGA TATCACGTAGTTCAACTAACATTAATTGGAAGTTACGTACGTTGGTCGAg ggacaaagtaatgagccattCCGGGACTAGGCAAACAGTAGACTAGTGGA GTCTGCTTCTGATtaaactttgctttctgatgattttgatggcgccgctg agtccagtgaagtagactagaggatatcgccatcttgaattttttcactt tcgttttcaaaaattatatgcaaaaaatcaaaacaataaaatgttttcta aaattccATCAAAGTTTAGGAAactataataaaataaaaacaagaaaata cctCCAAATTGGTCTATTGGTCATGGTTTTCTGTtcgtttttcttcaaaa aaaggactggatctagtggtaCGGATACCTTGGTACCTACCACCTCGAGC AAAGCAAAAAAATGGAGCCTGCCAAGTTACACCAgaccacttatcagcgc catccagtctatcaaaaaccCCGGGCTAGGCAAACAGtagaaacatgttt ttttttcacggCGACATGCTTAATGATGGGTGTAAGACAAAGTGCGTAAg atgaaaatttcaacaaatgatttgaatatatttaatttaTGAATGCACGA CACATTGAATAAGTAAATAAAGTAttgttttttcttatataaaaacatat aaaaaaggACTATCATGATGGGAAAATCCCTCATTTAACCCACATTTTAT TAGGCTTAACGGTAATCTCTGCCACTAGCttgatcgggaagattcttccg aattGGAAAGAAACTTATCGAACGGTAAGAGTAATAAGCAAGAATTTTGT AGAATATTATCTGCGCCCCCTTTGGGAAGATTCTGTCTCAGCGGgaagtt gaaactttttcacAAATGACAAATTCCtatctaaaatgttgaaaaaaaga tGGCCTTATTATctacaaataaaaaagttaaattcttAAGtcgttcttaa tattttggccattgaaggcTTTTTATGTTCTTAGCTtgtacttataaaaa aacgtgtatatgttATGtattatacaccttttcgaccgtagccgcttATT TCCGCGCGGGCACTTTTTGTTATGAatttaaaagatttgaaaatatatat ataaaacacGTGAAACTTACTGTGCTTTTTTCTTTCCTTGCGTATTTCCT CTCTAGCAACTTTCTTTGCTTTTGTCCAGTTTTGAGCTGCTCTTTCCTGC T
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005600TCONS_00005600Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000054supercontigsc0000054:712246..717396 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.89 0.81 1.28 1.42 0.85 0.25 0.37 0.35 1.17 1.16 0.68 1.04 5.78 4.92 2.7 2.29 1.9 2.81 11.33 11.94 3.71 4.06 1.56 2.27 1.24 2.61 1.21 0.83 0.28 0.38