XLOC_003354 (gene) - C. hemisphaerica

Overview
NameXLOC_003354
Unique NameXLOC_003354
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000061:1000407..1002539+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003354 ID=XLOC_003354|Name=XLOC_003354|organism=Clytia hemisphaerica|type=gene|length=2133bp|location=Sequence derived from alignment at sc0000061:1000407..1002539+ (Clytia hemisphaerica)
CACAAATATCCcaacaaaatcttttattttgccATGCGATTTTTATAGCT
ACCTGATGGAAACCAGGTCTGGTTATCAGAAGAGAGATTTCAAGCACCAG
AGTTATTATTTCAACCATCATTGATTGGGAAAGAACAACCTGGTTTTCAC
ATGTTTCTTGAAAAATCAGTTCAAAAATGCGAGATTGATTTACGTTCGGG
TCTTTATGAAAATATCATACTGGCAGGTAAGATTTAACTTGTGTTACCTC
TCCCTCTCATTAACTCGAacccttaaaggttttatttttacataagtgtt
cccatttcatatcggacacatatttcataccaggacagtgtctccctatt
gttatactGTGCTGaataagcaaaaaattgttttcgttTCCTCTTTTTGA
ACagtcttgctccacatccgtgtcaattaaATGTGAACGAGTAAACAAAT
GGAATCactcttattttaaaaacaaaaccttcaacTCGAAAAAGTTTGCT
CTCTACAGTTAACAATACCTCATAAACTGGGAGTTCGaatacaaatttgt
tcaagttatAGAGACTTCACTCTGTTTATTGAGAAAAATTGGCGTGTATC
AGACTGCTTCAGAGGGATTTTGCACCTGAATTTGCTCGAAAAACTTTGAC
ACAATCTTGCAGAACACGGgagtgcttgaaaaaaaaacgcgAATCTAACT
CTAGCTGTCTGTTATAATAAGGTATAACCGAGAACTAGAGTCTAATCTCA
TATGTAGGATTTAAGGTCATTTATTTCCTACACACGTTGCGCGGCTTgcg
tggttttcatacaaaTAGATTTGAAATACAGTTGAATtcatgtaattcga
actccTATAATTCGGAAACTCACTTAATTCGAACAGATTCTGTGGTCCCC
TCAGAATtgaccttgaaaaccttacaaggaaactcctataattcgaaccc
atgtaattcgaaaaatcatGTAAATCGAACAGATTTTCCAGTCCCAACAA
GAAATTTTaatcatgtaattcgaatttttgaatttttttgagtttttgaa
gcTGACAAACTTGACATTTTGTCCATCGAACGTTTTCGAATGCTTTCTTT
TTTACATTCAATCTCCGAAGAGATTTCCAAGAAACGAGAGCAGAGAtgaa
acaatcaaatcaaagacttttttgaaaaattatcaattaagtatttcatt
attctaactcgaaaatacaaaaaattgctcaaaagtAAACCTGGGAAAGA
CTTTTTTCATCGAATTAGGTCAGAAATACGAAAACTTATCTAGTTcgaaa
ctcatgtaattcgaacaaaaattctcggtcccttgagaattcgaattaca
tgagtttaACTGTAACATTTATCGCTAGAAAtcgaaaaaatgttaaaacg
TGAAAACGAAGAGAAAAGTGGTATATTCAATCTGTCATCCGAAATGCGTC
GCAAATTTTAAGGCATACATTTTCCTTACCTAGAAAAGGtagaagattcc
tctctagtcTTCCGCTTTGAAACTCTCcctaatttgattttaaagggacc
aaaaattttcttcgaattagagaaagattcgaataatagaggttcgaatt
aattGACTTTATTGTTCATTATTTCCAATCTAGGTGGCAATTCGATGATA
CCTGGCATACACGAAAGAATGATGACCGAACTTACAGCTCTAGTTAGACC
AAAGACATCAAGAACCATACGAATTCATGAGAATAAACATGGAATAGATT
CAGTGTGGAAAGGTGCTAGTGTGTTATCATCTTTATCTACTTTCGAAAGC
ATGCTGATAACACGAGAGGAATATTTTGAGTATGGTAATAAGATTGTACA
CATGAAATGTTTTTCATAAAGAGTTTCATCGACATCGACATAGCATATCA
GCATAGTGACTTTGAatggtgaaaaacccgacccttgcCGTCAGCACATA
CTCAGCACCTATTTTTGAAGTGCGATTTTTCTATCGAGTCTTAAATGGAG
AGGAAATCAAAGTCAATAGTCCTGTGGGGCTGAAATGTaacgaaattttg
gtgaaatttttgaatcaaaattttcatatctgtttccaaaatttaagaaa
aagtaCGCAATTTAAgcaaattttaattctttt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005872TCONS_00005872Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005872-proteinTCONS_00005872-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000061supercontigsc0000061:1000407..1002539 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.6	3.41	5.83	3.5	1.02	1.02	4.5	4.46	2.6	3.08	2.43	1.51	2.78	2.46	0.31	0.29	3.66	2.59	5.76	3.66	4.45	4.56	1.97	2.72	3.98	6.18	0	0.4	0.91	0.39