XLOC_003664 (gene) - C. hemisphaerica

Overview
NameXLOC_003664
Unique NameXLOC_003664
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000067:364658..368470+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003664 ID=XLOC_003664|Name=XLOC_003664|organism=Clytia hemisphaerica|type=gene|length=3813bp|location=Sequence derived from alignment at sc0000067:364658..368470+ (Clytia hemisphaerica)
CTGCTGAACTTCGGTCCCATTATAGGTTGAAACCAAGCTCTTCGATGTGG
ATTTCTCACATCATAGGCTTGAATACGAATCCAAGTAATCTTTGAGGCAg
gaattttgctatttttgagtTGAACTTTTGTTCGGTAGTCTTCGTGAAGT
TTGAAATAACCTCGATGGCATGTGATGACTGGTTTTGATTTGGATTCATC
ATAAACTTCAACGGTGTACTGCCAAACAATGTGCTCAGCGATCCGCTGTT
TTTTAACACCTTTCACTTTTTGAGCTTTGGGCATTATGAAGGCTAAACCC
TCAGTAGAAGTGTCAGTGTCTGGGAAACTGTCGACTGAACAATCTGGTTT
TTGTTTAGTGTCGCCAATCTGGATGGGGTAATATTGCTGAAAGTTGTCAT
CATCGTCACGGTAGTTGAAAATATCATAAATACCTGGATAATTGAGAAGG
ACAAGAATTTattatgctgaaaaatattgtttgtttAATGATTTGTCTAT
GGTGATCTTTTTACCCTGGTTAGANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgctcgacgacggtaaaaaac
accaaaataccgtcgtctgtttaggtgagcaaaggcgatatagagccgta
catcaactatcgactttgttttgtatcatttcgcttaccgtcgccctcga
tatcttccgatacataaactcggtaatgttCTAAATGGTTGCCCGTTGAA
ATAAAAGATAGCACAAAACGGGCTTTTCAACTTCAACGAGCTTCATTCTA
AAGGCCTTCAATGCAAGAAGTTTAAGGGAAAATGACTTTATAGCTAAAAT
CAGGAAACTTCAAACATCTGAACAATAAAAGCACCAAAGGACAAtaagtt
catttttttttcctcacttttcatcttcattttcgaaaatttaatcTAAT
CTATAAGTTATTTTTCCCAGAAATGATACTGCTCTGAATTATATTTTCAA
CGGTATATAAATGTTAGGCGGTGCGCAGTAGTACAGTAGTTCACACTTAA
TGCGAAAGGACGTTGATGATGATGTTTACATACCTGTGTGTCCAAAGAAA
CGTCCCTCAATCATGTATTTGATCATTTGAAACTCCCCTTCATCCAGGTT
GGCAACTTGTTGAATATAATCATGTGATCCATAAACTGTCTTCTTCAACT
TCAACTCTGGATCAATCAAAGCCGTATATCTGAAAGATATAAATTCATAT
TAACATATACGTCGACTGTGTAATTCGTAGTGAAACATTGGCCCCTTCAG
CTAAAAAGAGTCGTATAAAATTTTCACTGTAAATCAAACCTTCTTTAATT
CGAAGAAAACTTTTAGCTCCATTAAGATCGAATTAGGGAAACCTCATTAC
CTATAATGTCCGTTGTTAAGTTAAGTAAGTTCAAAGACGGCTATTAGTAC
ACCATTCACTCGAAAGCTTTGATTCCTGATCTTCATATTTGATCACTCAT
TTTGTCGCTCCCGTACTGATATGCACCACCCCATATTTTCAATAACCCAT
CCGAATAGCAAGCCAAGTCGAGATTGGCTTATTTTTTCTTAGTTGGTAGT
TGGTATTTGAAATAAAAAATGTGTGAAAATTTGAAATACGGGTCGGTTAA
ACAATCGATTTTCTGGTATTGAAGAGGTGCAGGGAAGCTTACCCAAATAC
GGTTTTCTGTTCGTAAGGCATCGAGCCAAGGAAATGTAAATTATCATTTT
TCTGCTTATACTCCACAGCTTCTTCTTCACCACCTTCGTAAGAGACGAGA
TCTTTACGAAGACTTCGAAGCTCAGTCATTTGTCGGTTGTGGTCAGTCTT
CAGTTTGCTGGTCAAATGCTGACGTGGTTCACTTCTAGTAGATTTTGTAG
CAACCGTCCCCGCATCTAAAGAAATAGAAGAccagagtctacttttggct
gaactttgctttttgataaaagaatgagtccagtgaagtagactaggagt
gtttggcgaggtcgccattttgagagaaaatgttaaaaatccaaaaacta
aAATcttaagcaaaagcatattaccatatactaccagGCCACTTAATCGC
ACCATCCattctatcaaaaagctttaactTAAGTGGAACCCGGGctaaag
aaatagaagaaatgATGAGCGACTGGTTTAAGCTACAATATTTACGAAAC
AAAGATTACTCCTAGTTGGAATTCCTCCTCCTCATTCGATGGATGAGCAA
GCTTTCCTCTGACCATGCGTAAACAAAAGACTGTCTGGTAACTTTTGGAA
TATTTATattaattgaaattttgcaagtgtGCACTTATCATTGATGACGT
AATCAATATTTGAAAATGCTGAGGAAAAGGACCccttttttcactttatt
ttttttttgctaaagttTTGTGACATGTATTTTTGAGACAGCGGATCAAT
TCTTTGCACTTTCTAGTATcgtatattttacagaccaaccAAAAATTGCC
CATGTCCCTAAATGAGCCCTAAGTTACTGTATTAAGGGATTGGAAAATGC
TATTGACATGAACTTTTGATAAATCTTATGTACTGATGAAGCTTGCAgtc
aaatttcagcaaaatcagaCCAGCGGTTACCTTAAGTGAAGTAATTTTTT
CGCGGTAGACAATTAAAAACGAAGAAATTaattccgcgaaaataagttct
gcgaaaattagttccctttagGTATGCTAAAATAAAACACTTACTTCGAT
CGACAACCACTGTTTCTCGGACATACATAGCATCGTTAGCGGACAGTATT
TGCATATAACTTCCGTATCTCAAGGAAGTCTCCACAAGGAATTCACCGAA
CTCCAAAGGGTATGTATCAAACCAATGAACATAATTGTTGGGCGTTCCTT
CTTTGTCATGTAGGAAGCCGTTACCGCCTTTCCAGGGGTCATCCTTACCT
TCATCCAAGGGAGATGCTGAATAATAATATCTAAGTAAGAGATAATGGGA
AATTCAAGTCATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006425TCONS_00006425Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000067supercontigsc0000067:364658..368470 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.86	0.99	1.14	1.08	0.69	0.28	0.34	0.52	0.45	0.2	0.91	1.85	4.3	3.89	35.24	37.18	3.38	2.3	2.21	2.59	0.17	0.31	0.39	0.47	0.5	0.64	0.16	0.06	0.2	0.28