XLOC_003674 (gene) - C. hemisphaerica

Overview
NameXLOC_003674
Unique NameXLOC_003674
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000067:680409..684043+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003674 ID=XLOC_003674|Name=XLOC_003674|organism=Clytia hemisphaerica|type=gene|length=3635bp|location=Sequence derived from alignment at sc0000067:680409..684043+ (Clytia hemisphaerica)
AAAtaactttatgaaatttcatCTATTTTCTGTGGCGTTGTGGTTTAGTA
ATAAAATGTGCCGAGAAGCTTATTAACAGCGCAAGAGGAAACTACTATAT
TGATTGTTATAGAAAGTGATAACCTTTTTAATGTTCATTGTCGCTACAAT
TTATTGGAGATGTTCGATTAACCGCTTGCTTTTTTTGGAAAGTGAATTAA
ATAGATTAAATCAATATTCTACGTGGATAACCTAATGATCTTGGTCTTTA
AGACGATTCTTTACACGGGGTCTACGGCTAACCGTCTAGGCTATCTATGA
ACTTAACGTGATATTGAACGGAGTAGGAATTCGAACCGGACGCTCTGTTT
TATGGTCGTCACCACAGACCAATCAACAATCGCCTACAATGAATTCTAAG
CGATATCTCTTATTTTTCCTGTTGGTACTTGTCTCCTATGGACTTTTGTA
CTTGTTTTCTGCTTACACGAATGGTAATGATACTTTCGATTATGCAAGGT
TGAAATTCTTTATTAAATCTGGCATGCAATTGAGCAATGCAAGTGAAGTC
GAATACCCGAGTAAtaattcttcaattttaaaaatcaccCGTGAACCAGT
GTTGACATTTACAGCAACATCAAAACCTTCAACACAAAAACTAAAATCGT
caacaatgttttcaaaaacaacagTCAACGCTCATTCTACAACACCCACC
AcgtcaacaaaaaatacaatCAACGCTCATTCTACAACACCCACCACGCC
AACAAAAAATACAGTCAACGCTCATTCTACAACACCCACCACGTCAACAA
AAAATACAGTCAACGCTCATTCTACAACACCCACCACGCTAACAAAAAAT
ACAGTCAACGCTCATTCTACAACACCCACCACGCTAACAAAAAATACAGT
CAACGCTCATTCTACAACACCCACCACGCCAACAAAAAACAAGTCCACGC
CCGAAAATCCAACATCTTCGTCAACGCCCAAACCAACCACCACTGGACCG
CCCGATCTTTGTCCCCATCCAACACTCCCACACAAAATTGAAATCCAAAC
CAAAGACCAAATTAGTTGCAAACCTTACATACTGACCCCAAAATCTTGTA
AATACGTAGCAAAGGAATATGTTTATAAATACAAAGACCACAAATGCGGG
TCACAGAATGACGGGATAGAAAACGTCGATATTTGCCAATTCGTTGAAAA
AGATGTTAAATTTAAATGTAACTTTGAAGCATGCGGTGGCAACAAGGATC
AACAAATTTACATACACGTGTTCAAAGACGATACGGGGTGGCATGAAGCT
GTCAAACCTGGATTGAACAACTCCAAATCACTCGAAAATGCTTTACTAGA
ACACGTAAAGAAATTGAGAATAGCAAAAGATTTTGTATTCTTAAGTTGTG
GTGAAAATAAGACTAGAACACAACTGGTACACTTTGACTCATCGCATTTT
AAAGAAACCAAGCCACAAAAAGAACGTAAAAACATTAACGGATCTGATCA
TACCGCTAAAGTTAACATAAATGTTGTTTGGTTGGATTCACTATCACGTC
GTCATTTCTATCGTTCATTGCCGAAGACGATACAGAGAATCACCGACATA
AACAGTGACCCATCAACCAAAACTGAAATATTAGATTTCGAAATGATGCA
AGCTGTCCATGGGGCCACCCACGAGAATTTAATTGCATTCTTTGAAGGTC
GTGTTTTACCTAAAGAAAAGAGGAGTAGACAACCACACCTTGACAATCTT
TTGAACTTCACGAGACAATCTGGATATCGGAATGTGTACCAGGAGGACAT
GTGCTATAAGGGAGGATGGGGATTCAATGGGAGAGCAAAAGCTGGTGGAA
AATGGACAAATATTGTTAAAGGGATCAATAAATTTGCCATAGACGATACA
GGTACATAATTTAGCTCTGTAAAATTAGTTGAGCCCGCGCCTACACATTG
GTTCTGTCTCTCTTGTCtttctatttttgtttcagtATTCATCATATATT
TGTGCTCTCAGAATCAAACTTATGTTTAAAAGCAATTTCAAAAAGTGGTC
ATTTCGGGTTTAtcataaaaacatttgaaagtaTTATACTGTAGCCATCA
TTTTCTACACCAGTACCAACCCGGATGCTGTTTCCTTTAATTAACCTTCA
ACAGCTTAAAGTTTCGTTGTTCTTCTGTTTCAGGTTTGACATTCGCTTCC
TGCAAAATGATCGAGTCCTATCACAATAGTTTAAGCATTTTCCACGACGA
TAAAGACTTTTGTTATAACGGACTCAACTACAATACGTATTACGTACGTC
ATATCGCTAAGAAACTGAAAACCACGGCTTCGAATTTATTCTTGTTTTCT
ATACTGTGTATACCGCACGATTACGGTGGTTACCGTGTACAAGGAGCTGA
TCACGGTCTCGCGGAATTTATCACGGATATGAGCCAACTTGAGAACACGA
TCACGTTCTTATTCGCGGATCACGGTAACACGTATACGAGATACGCTAGT
TATACATTAGACGGACGTCATGAGCAATTTAATCCTCATTTCTTTACGAT
CGTACCGGGAAACGTTATCGGGAAAATCGGTAAATCATCAATGGATGCTC
TACGTCGAAATCGCCTTCGAATGGTGACTTTGATAGATCTCCACCACACT
GTTAAACATCTCGCTAATACCAATTACCAAAACAAAGGTCTTTTAACAGA
AGTTCCTACAAATCGAACGTGTAGCACTGTCGAGTTATCGACTCCCATTT
ATTGTATTTGTAAAGGTTGGCGTAAAACTGAGCATAATAAAACCTTATTT
TGGCCTTTCGTTGAATTCGCAGTTGGACAGTTGAATAATGTTATATCCGA
TGCGTCACCCAAGGGGCGTTGTAAATGGTTAGTCCCGTCCGGTTTTGAGA
GCCTAAGTACTGTTTTAGCTGGTTCGAATATAGACTTATCATTCGATGTG
TTAGCAAAACCAGGTCCTGGATCTAGTAATACGGAAGATAAATTCTCCTT
CCACATCTTGTACCAAAGAAATATGAAACAGAAGACATTCAGCACTAAAC
TCGTTTCGTATTCACGTCTATCTCCTTACTTCGGATATGAAGAATGTAGT
GATACGAAACCAAAAGATCTCAGGTTGTGTATATGTAATTTGAATTTCCC
ATCCAATAAAAGTGCACCTAAATTATTAACACCTTATAATCTGTTACCAG
CAAGGACAGACTATGTTTCCACAATCAAGCGTAAAGACTTCTTTTCCAAT
GAAAGTATCTCAAATATAGATAAAGAATATTTGAGTCTCATAAAGAGGGA
TATTTACGAGGAACCGAACCAGAAATCAAGGATTTCAACAACTTTCGAAG
TTGTCAATTATTCGTCTCACAGAACCTATGAAGTTAGCATCAATGTTACC
AGACTGGATAACATAAAACCGATGAGTGACCACAAATGTAATGACACTGT
CAAACCAAACTCTATCAGATATTTATGCACTTTGGGTAGAATTGAATTTT
CAGGTCATGGGACATTTNCATCAGATATTTATGCACTTTGGGTAGAATTG
AATTTTCAGGTCATGGGACATTTGACTATAAAGTGAAATACAAGCTTATT
AAAATGGTCAACTTAAACTGACATTTTGATTTAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006446TCONS_00006446Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006446-proteinTCONS_00006446-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000067supercontigsc0000067:680409..684043 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.2	0.13	0.27	0.22	0.07	0.07	0.25	0.27	0.14	0.16	0.23	0.09	5.86	3.62	0.65	1.14	0.52	0.62	10.48	8.05	0.83	0.75	0.55	0.85	0.52	0.96	0.06	0.05	1.15	1.29