TCONS_00006446 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006446
Unique NameTCONS_00006446
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3353

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006446 ID=TCONS_00006446|Name=TCONS_00006446|organism=Clytia hemisphaerica|type=transcript|length=3353bp
AAAtaactttatgaaatttcatCTATTTTCTGTGGCGTTGTGGTTTAGTA
ATAAAATGTGCCGAGAAGCTTATTAACAGCGCAAGAGGAAACTACTATAT
TGATTGTTATAGAAAGTGATAACCTTTTTAATGTTCATTGTCGCTACAAT
TTATTGGAGATGTTCGATTAACCGCTTGCTTTTTTTGGAAAGTGAATTAA
ATAGATTAAATCAATATTCTACGTGGATAACCTAATGATCTTGGTCTTTA
AGACGATTCTTTACACGGGGTCTACGGCTAACCGTCTAGGCTATCTATGA
ACTTAACGTGATATTGAACGGAGTAGGAATTCGAACCGGACGCTCTGTTT
TATGGTCGTCACCACAGACCAATCAACAATCGCCTACAATGAATTCTAAG
CGATATCTCTTATTTTTCCTGTTGGTACTTGTCTCCTATGGACTTTTGTA
CTTGTTTTCTGCTTACACGAATGGTAATGATACTTTCGATTATGCAAGGT
TGAAATTCTTTATTAAATCTGGCATGCAATTGAGCAATGCAAGTGAAGTC
GAATACCCGAGTAAtaattcttcaattttaaaaatcaccCGTGAACCAGT
GTTGACATTTACAGCAACATCAAAACCTTCAACACAAAAACTAAAATCGT
caacaatgttttcaaaaacaacagTCAACGCTCATTCTACAACACCCACC
AcgtcaacaaaaaatacaatCAACGCTCATTCTACAACACCCACCACGCC
AACAAAAAATACAGTCAACGCTCATTCTACAACACCCACCACGTCAACAA
AAAATACAGTCAACGCTCATTCTACAACACCCACCACGCTAACAAAAAAT
ACAGTCAACGCTCATTCTACAACACCCACCACGCTAACAAAAAATACAGT
CAACGCTCATTCTACAACACCCACCACGCCAACAAAAAACAAGTCCACGC
CCGAAAATCCAACATCTTCGTCAACGCCCAAACCAACCACCACTGGACCG
CCCGATCTTTGTCCCCATCCAACACTCCCACACAAAATTGAAATCCAAAC
CAAAGACCAAATTAGTTGCAAACCTTACATACTGACCCCAAAATCTTGTA
AATACGTAGCAAAGGAATATGTTTATAAATACAAAGACCACAAATGCGGG
TCACAGAATGACGGGATAGAAAACGTCGATATTTGCCAATTCGTTGAAAA
AGATGTTAAATTTAAATGTAACTTTGAAGCATGCGGTGGCAACAAGGATC
AACAAATTTACATACACGTGTTCAAAGACGATACGGGGTGGCATGAAGCT
GTCAAACCTGGATTGAACAACTCCAAATCACTCGAAAATGCTTTACTAGA
ACACGTAAAGAAATTGAGAATAGCAAAAGATTTTGTATTCTTAAGTTGTG
GTGAAAATAAGACTAGAACACAACTGGTACACTTTGACTCATCGCATTTT
AAAGAAACCAAGCCACAAAAAGAACGTAAAAACATTAACGGATCTGATCA
TACCGCTAAAGTTAACATAAATGTTGTTTGGTTGGATTCACTATCACGTC
GTCATTTCTATCGTTCATTGCCGAAGACGATACAGAGAATCACCGACATA
AACAGTGACCCATCAACCAAAACTGAAATATTAGATTTCGAAATGATGCA
AGCTGTCCATGGGGCCACCCACGAGAATTTAATTGCATTCTTTGAAGGTC
GTGTTTTACCTAAAGAAAAGAGGAGTAGACAACCACACCTTGACAATCTT
TTGAACTTCACGAGACAATCTGGATATCGGAATGTGTACCAGGAGGACAT
GTGCTATAAGGGAGGATGGGGATTCAATGGGAGAGCAAAAGCTGGTGGAA
AATGGACAAATATTGTTAAAGGGATCAATAAATTTGCCATAGACGATACA
GGTTTGACATTCGCTTCCTGCAAAATGATCGAGTCCTATCACAATAGTTT
AAGCATTTTCCACGACGATAAAGACTTTTGTTATAACGGACTCAACTACA
ATACGTATTACGTACGTCATATCGCTAAGAAACTGAAAACCACGGCTTCG
AATTTATTCTTGTTTTCTATACTGTGTATACCGCACGATTACGGTGGTTA
CCGTGTACAAGGAGCTGATCACGGTCTCGCGGAATTTATCACGGATATGA
GCCAACTTGAGAACACGATCACGTTCTTATTCGCGGATCACGGTAACACG
TATACGAGATACGCTAGTTATACATTAGACGGACGTCATGAGCAATTTAA
TCCTCATTTCTTTACGATCGTACCGGGAAACGTTATCGGGAAAATCGGTA
AATCATCAATGGATGCTCTACGTCGAAATCGCCTTCGAATGGTGACTTTG
ATAGATCTCCACCACACTGTTAAACATCTCGCTAATACCAATTACCAAAA
CAAAGGTCTTTTAACAGAAGTTCCTACAAATCGAACGTGTAGCACTGTCG
AGTTATCGACTCCCATTTATTGTATTTGTAAAGGTTGGCGTAAAACTGAG
CATAATAAAACCTTATTTTGGCCTTTCGTTGAATTCGCAGTTGGACAGTT
GAATAATGTTATATCCGATGCGTCACCCAAGGGGCGTTGTAAATGGTTAG
TCCCGTCCGGTTTTGAGAGCCTAAGTACTGTTTTAGCTGGTTCGAATATA
GACTTATCATTCGATGTGTTAGCAAAACCAGGTCCTGGATCTAGTAATAC
GGAAGATAAATTCTCCTTCCACATCTTGTACCAAAGAAATATGAAACAGA
AGACATTCAGCACTAAACTCGTTTCGTATTCACGTCTATCTCCTTACTTC
GGATATGAAGAATGTAGTGATACGAAACCAAAAGATCTCAGGTTGTGTAT
ATGTAATTTGAATTTCCCATCCAATAAAAGTGCACCTAAATTATTAACAC
CTTATAATCTGTTACCAGCAAGGACAGACTATGTTTCCACAATCAAGCGT
AAAGACTTCTTTTCCAATGAAAGTATCTCAAATATAGATAAAGAATATTT
GAGTCTCATAAAGAGGGATATTTACGAGGAACCGAACCAGAAATCAAGGA
TTTCAACAACTTTCGAAGTTGTCAATTATTCGTCTCACAGAACCTATGAA
GTTAGCATCAATGTTACCAGACTGGATAACATAAAACCGATGAGTGACCA
CAAATGTAATGACACTGTCAAACCAAACTCTATCAGATATTTATGCACTT
TGGGTAGAATTGAATTTTCAGGTCATGGGACATTTNCATCAGATATTTAT
GCACTTTGGGTAGAATTGAATTTTCAGGTCATGGGACATTTGACTATAAA
GTGAAATACAAGCTTATTAAAATGGTCAACTTAAACTGACATTTTGATTT
AAG
Run BLAST on NCBI

protein sequence of TCONS_00006446-protein

>TCONS_00006446-protein ID=TCONS_00006446-protein|Name=TCONS_00006446-protein|organism=Clytia hemisphaerica|type=polypeptide|length=971bp
MNSKRYLLFFLLVLVSYGLLYLFSAYTNGNDTFDYARLKFFIKSGMQLSN
ASEVEYPSNNSSILKITREPVLTFTATSKPSTQKLKSSTMFSKTTVNAHS
TTPTTSTKNTINAHSTTPTTPTKNTVNAHSTTPTTSTKNTVNAHSTTPTT
LTKNTVNAHSTTPTTLTKNTVNAHSTTPTTPTKNKSTPENPTSSSTPKPT
TTGPPDLCPHPTLPHKIEIQTKDQISCKPYILTPKSCKYVAKEYVYKYKD
HKCGSQNDGIENVDICQFVEKDVKFKCNFEACGGNKDQQIYIHVFKDDTG
WHEAVKPGLNNSKSLENALLEHVKKLRIAKDFVFLSCGENKTRTQLVHFD
SSHFKETKPQKERKNINGSDHTAKVNINVVWLDSLSRRHFYRSLPKTIQR
ITDINSDPSTKTEILDFEMMQAVHGATHENLIAFFEGRVLPKEKRSRQPH
LDNLLNFTRQSGYRNVYQEDMCYKGGWGFNGRAKAGGKWTNIVKGINKFA
IDDTGLTFASCKMIESYHNSLSIFHDDKDFCYNGLNYNTYYVRHIAKKLK
TTASNLFLFSILCIPHDYGGYRVQGADHGLAEFITDMSQLENTITFLFAD
HGNTYTRYASYTLDGRHEQFNPHFFTIVPGNVIGKIGKSSMDALRRNRLR
MVTLIDLHHTVKHLANTNYQNKGLLTEVPTNRTCSTVELSTPIYCICKGW
RKTEHNKTLFWPFVEFAVGQLNNVISDASPKGRCKWLVPSGFESLSTVLA
GSNIDLSFDVLAKPGPGSSNTEDKFSFHILYQRNMKQKTFSTKLVSYSRL
SPYFGYEECSDTKPKDLRLCICNLNFPSNKSAPKLLTPYNLLPARTDYVS
TIKRKDFFSNESISNIDKEYLSLIKRDIYEEPNQKSRISTTFEVVNYSSH
RTYEVSINVTRLDNIKPMSDHKCNDTVKPNSIRYLCTLGRIEFSGHGTFX
SDIYALWVELNFQVMGHLTIK
Run BLAST on NCBI

transcript from alignment at sc0000067:680409..684043+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006446 ID=TCONS_00006446|Name=TCONS_00006446|organism=Clytia hemisphaerica|type=transcript|length=3635bp|location=Sequence derived from alignment at sc0000067:680409..684043+ (Clytia hemisphaerica)
AAAtaactttatgaaatttcatCTATTTTCTGTGGCGTTGTGGTTTAGTA
ATAAAATGTGCCGAGAAGCTTATTAACAGCGCAAGAGGAAACTACTATAT
TGATTGTTATAGAAAGTGATAACCTTTTTAATGTTCATTGTCGCTACAAT
TTATTGGAGATGTTCGATTAACCGCTTGCTTTTTTTGGAAAGTGAATTAA
ATAGATTAAATCAATATTCTACGTGGATAACCTAATGATCTTGGTCTTTA
AGACGATTCTTTACACGGGGTCTACGGCTAACCGTCTAGGCTATCTATGA
ACTTAACGTGATATTGAACGGAGTAGGAATTCGAACCGGACGCTCTGTTT
TATGGTCGTCACCACAGACCAATCAACAATCGCCTACAATGAATTCTAAG
CGATATCTCTTATTTTTCCTGTTGGTACTTGTCTCCTATGGACTTTTGTA
CTTGTTTTCTGCTTACACGAATGGTAATGATACTTTCGATTATGCAAGGT
TGAAATTCTTTATTAAATCTGGCATGCAATTGAGCAATGCAAGTGAAGTC
GAATACCCGAGTAAtaattcttcaattttaaaaatcaccCGTGAACCAGT
GTTGACATTTACAGCAACATCAAAACCTTCAACACAAAAACTAAAATCGT
caacaatgttttcaaaaacaacagTCAACGCTCATTCTACAACACCCACC
AcgtcaacaaaaaatacaatCAACGCTCATTCTACAACACCCACCACGCC
AACAAAAAATACAGTCAACGCTCATTCTACAACACCCACCACGTCAACAA
AAAATACAGTCAACGCTCATTCTACAACACCCACCACGCTAACAAAAAAT
ACAGTCAACGCTCATTCTACAACACCCACCACGCTAACAAAAAATACAGT
CAACGCTCATTCTACAACACCCACCACGCCAACAAAAAACAAGTCCACGC
CCGAAAATCCAACATCTTCGTCAACGCCCAAACCAACCACCACTGGACCG
CCCGATCTTTGTCCCCATCCAACACTCCCACACAAAATTGAAATCCAAAC
CAAAGACCAAATTAGTTGCAAACCTTACATACTGACCCCAAAATCTTGTA
AATACGTAGCAAAGGAATATGTTTATAAATACAAAGACCACAAATGCGGG
TCACAGAATGACGGGATAGAAAACGTCGATATTTGCCAATTCGTTGAAAA
AGATGTTAAATTTAAATGTAACTTTGAAGCATGCGGTGGCAACAAGGATC
AACAAATTTACATACACGTGTTCAAAGACGATACGGGGTGGCATGAAGCT
GTCAAACCTGGATTGAACAACTCCAAATCACTCGAAAATGCTTTACTAGA
ACACGTAAAGAAATTGAGAATAGCAAAAGATTTTGTATTCTTAAGTTGTG
GTGAAAATAAGACTAGAACACAACTGGTACACTTTGACTCATCGCATTTT
AAAGAAACCAAGCCACAAAAAGAACGTAAAAACATTAACGGATCTGATCA
TACCGCTAAAGTTAACATAAATGTTGTTTGGTTGGATTCACTATCACGTC
GTCATTTCTATCGTTCATTGCCGAAGACGATACAGAGAATCACCGACATA
AACAGTGACCCATCAACCAAAACTGAAATATTAGATTTCGAAATGATGCA
AGCTGTCCATGGGGCCACCCACGAGAATTTAATTGCATTCTTTGAAGGTC
GTGTTTTACCTAAAGAAAAGAGGAGTAGACAACCACACCTTGACAATCTT
TTGAACTTCACGAGACAATCTGGATATCGGAATGTGTACCAGGAGGACAT
GTGCTATAAGGGAGGATGGGGATTCAATGGGAGAGCAAAAGCTGGTGGAA
AATGGACAAATATTGTTAAAGGGATCAATAAATTTGCCATAGACGATACA
GGTACATAATTTAGCTCTGTAAAATTAGTTGAGCCCGCGCCTACACATTG
GTTCTGTCTCTCTTGTCtttctatttttgtttcagtATTCATCATATATT
TGTGCTCTCAGAATCAAACTTATGTTTAAAAGCAATTTCAAAAAGTGGTC
ATTTCGGGTTTAtcataaaaacatttgaaagtaTTATACTGTAGCCATCA
TTTTCTACACCAGTACCAACCCGGATGCTGTTTCCTTTAATTAACCTTCA
ACAGCTTAAAGTTTCGTTGTTCTTCTGTTTCAGGTTTGACATTCGCTTCC
TGCAAAATGATCGAGTCCTATCACAATAGTTTAAGCATTTTCCACGACGA
TAAAGACTTTTGTTATAACGGACTCAACTACAATACGTATTACGTACGTC
ATATCGCTAAGAAACTGAAAACCACGGCTTCGAATTTATTCTTGTTTTCT
ATACTGTGTATACCGCACGATTACGGTGGTTACCGTGTACAAGGAGCTGA
TCACGGTCTCGCGGAATTTATCACGGATATGAGCCAACTTGAGAACACGA
TCACGTTCTTATTCGCGGATCACGGTAACACGTATACGAGATACGCTAGT
TATACATTAGACGGACGTCATGAGCAATTTAATCCTCATTTCTTTACGAT
CGTACCGGGAAACGTTATCGGGAAAATCGGTAAATCATCAATGGATGCTC
TACGTCGAAATCGCCTTCGAATGGTGACTTTGATAGATCTCCACCACACT
GTTAAACATCTCGCTAATACCAATTACCAAAACAAAGGTCTTTTAACAGA
AGTTCCTACAAATCGAACGTGTAGCACTGTCGAGTTATCGACTCCCATTT
ATTGTATTTGTAAAGGTTGGCGTAAAACTGAGCATAATAAAACCTTATTT
TGGCCTTTCGTTGAATTCGCAGTTGGACAGTTGAATAATGTTATATCCGA
TGCGTCACCCAAGGGGCGTTGTAAATGGTTAGTCCCGTCCGGTTTTGAGA
GCCTAAGTACTGTTTTAGCTGGTTCGAATATAGACTTATCATTCGATGTG
TTAGCAAAACCAGGTCCTGGATCTAGTAATACGGAAGATAAATTCTCCTT
CCACATCTTGTACCAAAGAAATATGAAACAGAAGACATTCAGCACTAAAC
TCGTTTCGTATTCACGTCTATCTCCTTACTTCGGATATGAAGAATGTAGT
GATACGAAACCAAAAGATCTCAGGTTGTGTATATGTAATTTGAATTTCCC
ATCCAATAAAAGTGCACCTAAATTATTAACACCTTATAATCTGTTACCAG
CAAGGACAGACTATGTTTCCACAATCAAGCGTAAAGACTTCTTTTCCAAT
GAAAGTATCTCAAATATAGATAAAGAATATTTGAGTCTCATAAAGAGGGA
TATTTACGAGGAACCGAACCAGAAATCAAGGATTTCAACAACTTTCGAAG
TTGTCAATTATTCGTCTCACAGAACCTATGAAGTTAGCATCAATGTTACC
AGACTGGATAACATAAAACCGATGAGTGACCACAAATGTAATGACACTGT
CAAACCAAACTCTATCAGATATTTATGCACTTTGGGTAGAATTGAATTTT
CAGGTCATGGGACATTTNCATCAGATATTTATGCACTTTGGGTAGAATTG
AATTTTCAGGTCATGGGACATTTGACTATAAAGTGAAATACAAGCTTATT
AAAATGGTCAACTTAAACTGACATTTTGATTTAAG

Coding sequence (CDS) from alignment at sc0000067:680409..684043+

>TCONS_00006446 ID=TCONS_00006446|Name=TCONS_00006446|organism=Clytia hemisphaerica|type=CDS|length=5832bp|location=Sequence derived from alignment at sc0000067:680409..684043+ (Clytia hemisphaerica)
ATGAATTCTAAGCGATATCTCTTATTTTTCCTGTTGGTACTTGTCTCCTA
TGGACTTTTGTACTTGTTTTCTGCTTACACGAATGGTAATGATACTTTCG
ATTATGCAAGGTTGAAATTCTTTATTAAATCTGGCATGCAATTGAGCAAT
GCAAGTGAAGTCGAATACCCGAGTAAtaattcttcaattttaaaaatcac
cCGTGAACCAGTGTTGACATTTACAGCAACATCAAAACCTTCAACACAAA
AACTAAAATCGTcaacaatgttttcaaaaacaacagTCAACGCTCATTCT
ACAACACCCACCAcgtcaacaaaaaatacaatCAACGCTCATTCTACAAC
ACCCACCACGCCAACAAAAAATACAGTCAACGCTCATTCTACAACACCCA
CCACGTCAACAAAAAATACAGTCAACGCTCATTCTACAACACCCACCACG
CTAACAAAAAATACAGTCAACGCTCATTCTACAACACCCACCACGCTAAC
AAAAAATACAGTCAACGCTCATTCTACAACACCCACCACGCCAACAAAAA
ACAAGTCCACGCCCGAAAATCCAACATCTTCGTCAACGCCCAAACCAACC
ACCACTGGACCGCCCGATCTTTGTCCCCATCCAACACTCCCACACAAAAT
TGAAATCCAAACCAAAGACCAAATTAGTTGCAAACCTTACATACTGACCC
CAAAATCTTGTAAATACGTAGCAAAGGAATATGTTTATAAATACAAAGAC
CACAAATGCGGGTCACAGAATGACGGGATAGAAAACGTCGATATTTGCCA
ATTCGTTGAAAAAGATGTTAAATTTAAATGTAACTTTGAAGCATGCGGTG
GCAACAAGGATCAACAAATTTACATACACGTGTTCAAAGACGATACGGGG
TGGCATGAAGCTGTCAAACCTGGATTGAACAACTCCAAATCACTCGAAAA
TGCTTTACTAGAACACGTAAAGAAATTGAGAATAGCAAAAGATTTTGTAT
TCTTAAGTTGTGGTGAAAATAAGACTAGAACACAACTGGTACACTTTGAC
TCATCGCATTTTAAAGAAACCAAGCCACAAAAAGAACGTAAAAACATTAA
CGGATCTGATCATACCGCTAAAGTTAACATAAATGTTGTTTGGTTGGATT
CACTATCACGTCGTCATTTCTATCGTTCATTGCCGAAGACGATACAGAGA
ATCACCGACATAAACAGTGACCCATCAACCAAAACTGAAATATTAGATTT
CGAAATGATGCAAGCTGTCCATGGGGCCACCCACGAGAATTTAATTGCAT
TCTTTGAAGGTCGTGTTTTACCTAAAGAAAAGAGGAGTAGACAACCACAC
CTTGACAATCTTTTGAACTTCACGAGACAATCTGGATATCGGAATGTGTA
CCAGGAGGACATGTGCTATAAGGGAGGATGGGGATTCAATGGGAGAGCAA
AAGCTGGTGGAAAATGGACAAATATTGTTAAAGGGATCAATAAATTTGCC
ATAGACGATACAGGTTTGACATTCGCTTCCTGCAAAATGATCGAGTCCTA
TCACAATAGTTTAAGCATTTTCCACGACGATAAAGACTTTTGTTATAACG
GACTCAACTACAATACGTATTACGTACGTCATATCGCTAAGAAACTGAAA
ACCACGGCTTCGAATTTATTCTTGTTTTCTATACTGTGTATACCGCACGA
TTACGGTGGTTACCGTGTACAAGGAGCTGATCACGGTCTCGCGGAATTTA
TCACGGATATGAGCCAACTTGAGAACACGATCACGTTCTTATTCGCGGAT
CACGGTAACACGTATACGAGATACGCTAGTTATACATTAGACGGACGTCA
TGAGCAATTTAATCCTCATTTCTTTACGATCGTACCGGGAAACGTTATCG
GGAAAATCGGTAAATCATCAATGGATGCTCTACGTCGAAATCGCCTTCGA
ATGGTGACTTTGATAGATCTCCACCACACTGTTAAACATCTCGCTAATAC
CAATTACCAAAACAAAGGTCTTTTAACAGAAGTTCCTACAAATCGAACGT
GTAGCACTGTCGAGTTATCGACTCCCATTTATTGTATTTGTAAAGGTTGG
CGTAAAACTGAGCATAATAAAACCTTATTTTGGCCTTTCGTTGAATTCGC
AGTTGGACAGTTGAATAATGTTATATCCGATGCGTCACCCAAGGGGCGTT
GTAAATGGTTAGTCCCGTCCGGTTTTGAGAGCCTAAGTACTGTTTTAGCT
GGTTCGAATATAGACTTATCATTCGATGTGTTAGCAAAACCAGGTCCTGG
ATCTAGTAATACGGAAGATAAATTCTCCTTCCACATCTTGTACCAAAGAA
ATATGAAACAGAAGACATTCAGCACTAAACTCGTTTCGTATTCACGTCTA
TCTCCTTACTTCGGATATGAAGAATGTAGTGATACGAAACCAAAAGATCT
CAGGTTGTGTATATGTAATTTGAATTTCCCATCCAATAAAAGTGCACCTA
AATTATTAACACCTTATAATCTGTTACCAGCAAGGACAGACTATGTTTCC
ACAATCAAGCGTAAAGACTTCTTTTCCAATGAAAGTATCTCAAATATAGA
TAAAGAATATTTGAGTCTCATAAAGAGGGATATTTACGAGGAACCGAACC
AGAAATCAAGGATTTCAACAACTTTCGAAGTTGTCAATTATTCGTCTCAC
AGAACCTATGAAGTTAGCATCAATGTTACCAGACTGGATAACATAAAACC
GATGAGTGACCACAAATGTAATGACACTGTCAAACCAAACTCTATCAGAT
ATTTATGCACTTTGGGTAGAATTGAATTTTCAGGTCATGGGACATTTNCA
TCAGATATTTATGCACTTTGGGTAGAATTGAATTTTCAGGTCATGGGACA
TTTGACTATAAAGTGAATGAATTCTAAGCGATATCTCTTATTTTTCCTGT
TGGTACTTGTCTCCTATGGACTTTTGTACTTGTTTTCTGCTTACACGAAT
GGTAATGATACTTTCGATTATGCAAGGTTGAAATTCTTTATTAAATCTGG
CATGCAATTGAGCAATGCAAGTGAAGTCGAATACCCGAGTAAtaattctt
caattttaaaaatcaccCGTGAACCAGTGTTGACATTTACAGCAACATCA
AAACCTTCAACACAAAAACTAAAATCGTcaacaatgttttcaaaaacaac
agTCAACGCTCATTCTACAACACCCACCAcgtcaacaaaaaatacaatCA
ACGCTCATTCTACAACACCCACCACGCCAACAAAAAATACAGTCAACGCT
CATTCTACAACACCCACCACGTCAACAAAAAATACAGTCAACGCTCATTC
TACAACACCCACCACGCTAACAAAAAATACAGTCAACGCTCATTCTACAA
CACCCACCACGCTAACAAAAAATACAGTCAACGCTCATTCTACAACACCC
ACCACGCCAACAAAAAACAAGTCCACGCCCGAAAATCCAACATCTTCGTC
AACGCCCAAACCAACCACCACTGGACCGCCCGATCTTTGTCCCCATCCAA
CACTCCCACACAAAATTGAAATCCAAACCAAAGACCAAATTAGTTGCAAA
CCTTACATACTGACCCCAAAATCTTGTAAATACGTAGCAAAGGAATATGT
TTATAAATACAAAGACCACAAATGCGGGTCACAGAATGACGGGATAGAAA
ACGTCGATATTTGCCAATTCGTTGAAAAAGATGTTAAATTTAAATGTAAC
TTTGAAGCATGCGGTGGCAACAAGGATCAACAAATTTACATACACGTGTT
CAAAGACGATACGGGGTGGCATGAAGCTGTCAAACCTGGATTGAACAACT
CCAAATCACTCGAAAATGCTTTACTAGAACACGTAAAGAAATTGAGAATA
GCAAAAGATTTTGTATTCTTAAGTTGTGGTGAAAATAAGACTAGAACACA
ACTGGTACACTTTGACTCATCGCATTTTAAAGAAACCAAGCCACAAAAAG
AACGTAAAAACATTAACGGATCTGATCATACCGCTAAAGTTAACATAAAT
GTTGTTTGGTTGGATTCACTATCACGTCGTCATTTCTATCGTTCATTGCC
GAAGACGATACAGAGAATCACCGACATAAACAGTGACCCATCAACCAAAA
CTGAAATATTAGATTTCGAAATGATGCAAGCTGTCCATGGGGCCACCCAC
GAGAATTTAATTGCATTCTTTGAAGGTCGTGTTTTACCTAAAGAAAAGAG
GAGTAGACAACCACACCTTGACAATCTTTTGAACTTCACGAGACAATCTG
GATATCGGAATGTGTACCAGGAGGACATGTGCTATAAGGGAGGATGGGGA
TTCAATGGGAGAGCAAAAGCTGGTGGAAAATGGACAAATATTGTTAAAGG
GATCAATAAATTTGCCATAGACGATACAGGTTTGACATTCGCTTCCTGCA
AAATGATCGAGTCCTATCACAATAGTTTAAGCATTTTCCACGACGATAAA
GACTTTTGTTATAACGGACTCAACTACAATACGTATTACGTACGTCATAT
CGCTAAGAAACTGAAAACCACGGCTTCGAATTTATTCTTGTTTTCTATAC
TGTGTATACCGCACGATTACGGTGGTTACCGTGTACAAGGAGCTGATCAC
GGTCTCGCGGAATTTATCACGGATATGAGCCAACTTGAGAACACGATCAC
GTTCTTATTCGCGGATCACGGTAACACGTATACGAGATACGCTAGTTATA
CATTAGACGGACGTCATGAGCAATTTAATCCTCATTTCTTTACGATCGTA
CCGGGAAACGTTATCGGGAAAATCGGTAAATCATCAATGGATGCTCTACG
TCGAAATCGCCTTCGAATGGTGACTTTGATAGATCTCCACCACACTGTTA
AACATCTCGCTAATACCAATTACCAAAACAAAGGTCTTTTAACAGAAGTT
CCTACAAATCGAACGTGTAGCACTGTCGAGTTATCGACTCCCATTTATTG
TATTTGTAAAGGTTGGCGTAAAACTGAGCATAATAAAACCTTATTTTGGC
CTTTCGTTGAATTCGCAGTTGGACAGTTGAATAATGTTATATCCGATGCG
TCACCCAAGGGGCGTTGTAAATGGTTAGTCCCGTCCGGTTTTGAGAGCCT
AAGTACTGTTTTAGCTGGTTCGAATATAGACTTATCATTCGATGTGTTAG
CAAAACCAGGTCCTGGATCTAGTAATACGGAAGATAAATTCTCCTTCCAC
ATCTTGTACCAAAGAAATATGAAACAGAAGACATTCAGCACTAAACTCGT
TTCGTATTCACGTCTATCTCCTTACTTCGGATATGAAGAATGTAGTGATA
CGAAACCAAAAGATCTCAGGTTGTGTATATGTAATTTGAATTTCCCATCC
AATAAAAGTGCACCTAAATTATTAACACCTTATAATCTGTTACCAGCAAG
GACAGACTATGTTTCCACAATCAAGCGTAAAGACTTCTTTTCCAATGAAA
GTATCTCAAATATAGATAAAGAATATTTGAGTCTCATAAAGAGGGATATT
TACGAGGAACCGAACCAGAAATCAAGGATTTCAACAACTTTCGAAGTTGT
CAATTATTCGTCTCACAGAACCTATGAAGTTAGCATCAATGTTACCAGAC
TGGATAACATAAAACCGATGAGTGACCACAAATGTAATGACACTGTCAAA
CCAAACTCTATCAGATATTTATGCACTTTGGGTAGAATTGAATTTTCAGG
TCATGGGACATTTNCATCAGATATTTATGCACTTTGGGTAGAATTGAATT
TTCAGGTCATGGGACATTTGACTATAAAGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003674XLOC_003674Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006446-proteinTCONS_00006446-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006446-exon-sc0000067-1491911889:680409..682309TCONS_00006446-exon-sc0000067-1491911889:680409..682309Clytia hemisphaericaexon
TCONS_00006446-exon-sc0000067-1510915933:680409..682309TCONS_00006446-exon-sc0000067-1510915933:680409..682309Clytia hemisphaericaexon
TCONS_00006446-exon-sc0000067-1575043694:680409..682309TCONS_00006446-exon-sc0000067-1575043694:680409..682309Clytia hemisphaericaexon
TCONS_00006446-exon-sc0000067-1491911889:682592..684043TCONS_00006446-exon-sc0000067-1491911889:682592..684043Clytia hemisphaericaexon
TCONS_00006446-exon-sc0000067-1510915933:682592..684043TCONS_00006446-exon-sc0000067-1510915933:682592..684043Clytia hemisphaericaexon
TCONS_00006446-exon-sc0000067-1575043694:682592..684043TCONS_00006446-exon-sc0000067-1575043694:682592..684043Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000067supercontigsc0000067:680409..684043 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.195301	0.132047	0.267732	0.224416	0.0659997	0.0721503	0.245323	0.270864	0.139903	0.16182	0.234329	0.0901831	5.86496	3.62053	0.647356	1.14115	0.521414	0.621519	10.4767	8.0515	0.825725	0.747506	0.54866	0.852037	0.52044	0.962341	0.0618919	0.0495395	1.15123	1.2949
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004245DUF229
IPR017849Alkaline_Pase-like_a/b/a
IPR017850Alkaline_phosphatase_core
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006446 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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