XLOC_003696 (gene) - C. hemisphaerica

Overview
NameXLOC_003696
Unique NameXLOC_003696
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000067:694612..697630-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003696 ID=XLOC_003696|Name=XLOC_003696|organism=Clytia hemisphaerica|type=gene|length=3019bp|location=Sequence derived from alignment at sc0000067:694612..697630- (Clytia hemisphaerica)
CTTAGCTTTAAAACTTCACAGAAGAAGAAAGAAAAAAATGAAGGTTGTTT
CTCTGATCTTCGTTATTTCACTGACAGCAATATCATTACCTGCCAACATC
ATCTCACTTATCCTTCTGATAAACGGCCGACGGAAATTCAAGCGGAAATG
GTTTATTTTGGTGAACTTGATAGTAGCTCACCTAATGCAGACGCTATTCT
CCTTCCCAATTTTAATCAATAGTTTATTTCATTCGAAATGGGTGTTTTCG
ATGGATTTGTGTCGAGTGGACGCTTTTGTGATGGCTGTGACCGGCTTTGA
AATCATCTTTACTCATCTTGTGATTACAATCGAAAGGTAACTGGCTGATT
ATTATTGTCTCTATACCAGAACCCAGTTGAGTTTAAATTCTGATCCTTTC
GAATGACGGATTGGATCTAATACTTCCTCTCTGTCATTGAGAAACCTTGG
TGAAATGCTTTTCATAATTCGAAGCTATCATGTAATTCGAACATTTTTTT
GTGATCATGTAATTCGAACATTTTTTTGTGAAAAGCACAGGCCGAAAACG
TATATCGACCTGTGCCGACCAATCCAGATTANGGAAAAATCTTTTCCTTA
AAACTATCTGTTTCCCCAGATCAATATTTCTAGGAGATGACATAATAAAT
TGGGAAACAGAGATCTGATATCTATTTTAGGTTTTGAGGAGAAACAGATC
TTCATTTCTAGGAATAAGATTTTTGACAACAGATCAAATTTTCCGAAACA
GATGTTTAAAACAAGGTCCTCGCTGGATGCTTTCGATCTCTGCCCCTTTA
AAACTCAACAAAGTCAACGAGAATATTTGTCTAAAGAGAACAGCTTTCAG
TATCCTATTTAAATGATTATTCTAAATTGTTGAAGAATTTGATGATGGTC
TAATTAGGGACATTGAAGTCTTTATAATCAGAAAAACCGAATCAAAATAA
TTTAAAGAAGATTGTATTAAGCACAGAATAAGGTATGGTACCAGTCGTTA
TAAAACCAATTTCATTCTTATCTTAGCTTTAAAACTTCACAGAAGAAGAA
AGAAAAAAATGAAGGTTGTTTCTCTGCTCTTCGTTATTTCACTGACAGCA
ATATCATTACCTGCCAACATCATCTCACTTATCCTTCTGATAAACGGCCG
ACGGAAATTCAAGCGGAAATGGTTTATTTTGGTGAACTTGATAGTAGCTC
ACCTAATGCAGACGCTATTCTCCTTCCCAATTTTAATCAATAGTTTATTT
CATTCGAAATGGGTGTTTTCGATGGATTTGTGTCGAGTGGACGCTTTTGT
GATGGCTGTGACCGGCTTTGAAATCATCTTTACTCATCTTGTGATTACAA
TCGAAAGGTAACTGGCTGATTATTATTGTCTCTATACCAGAACCCAGTTG
AGTTTAAATTCTGATCCTTTCGAATGACGGATTGGATCTAATACTTCCTC
TCTGTCATTGAGAAACCTTGGTGAAATGCTTTTCATAATTCGAAGCTATC
ATGTAATTCGAACATTTTTTTGTGATCATGTAATTCGAACATTTTTTTGT
GAAAAGCACAGGCCGAAAACGTATATCGACCTGTGCCGACCAATCCAGAT
TATATTCAGCGCGTACCAATCAACGCAGAGAAAAGTAACCATGACGACAA
TCCAAGATCTATTTCTATTATTGGTCTTCAGAGGTTGATATGTTCTTTGA
AAACTCAACCTCTGATACTCAGGGTAGAACATTTTGGATTCCCCATCCAA
TTAATTTTTGCTATCATCTTTTTGATTATTTTATAGGTCTGTGAAACTAC
ACAATCCATTAACAGAACACAAAATTATTCCAACGAGCCATCTAAAAATG
ATCTCAACAAGTACGTGGCTGGCAGCCATTTTATTTGCGTGCCCTCCAAT
GATTGGCTGGTCAAAATATGTATTAAATGGCGGAATGCATTGCGGGAGTG
ATTGGTCAAAAAGCGCGGGAAATATCAGTTATTTGGTGACATGTATCATA
TTAGGCTTTGCTTTGCCATATGTTATCATTATGATATTGAATATCGCTTT
CTTAAAACGTGTCCGCGAATTGAATAAAACACATCCAGTGAATGTGTCTG
TCTCATTGTTTGTTATTATTTCCATGACAATATTCACTATAGCCTGGATT
CCATTAGTAACATGTGGTCTAGTGGAGCTACTCTTTGATATAAAGATACC
GTTTGAGATTGAGATTGCATCCATGGTGACAAAGATAACAACAGTGACAG
ATACCTTTTTATTCTTGATTTTGAATAAGAACTTCCATGAAGTTGCTCGA
CAAACGTATAGAAGGTACACTTCATCGTTTATGAAAGATACAATTATCAA
GTCTTAATACGCATCACCCAATTCTTATTTTGGGCACTAGTGTGTATTTT
ACAGACCAGAACAAATAATTAGAATCATGCATTGATTGGATGTATCATTG
TTTTTTAAACAATGTTTAAGAATTTCTTGAAAATGTCATTTCTTTTTTGT
TGTCTTTTCAACCAAGGAGCTTGTTTCAACCGCTTTCTTTTGCGAATTGA
ATAGCCAACTTTGTGCAGAGCAGACCACTGATCATTTGATACAGTAGAAA
GTAGTTAACGCTAAAAGATGCCCTGATTTCGTGCAGAGCAAAGCTGCTTA
ATATAGCCTAGCAAGTAGCTGATGCCCCTATTGTAAGGGATGGGTTAAAT
AATCACGCCCGCTTAGCAATTTTTGGATAGGAAGTGCTGGACACACTCGA
TTTATAAAATACCGTATATTCCGCCCAAAGATAGGCCTTTATAATCGGAC
CCTTGCAGTGCAGAGAAAATAAAGCCAAATTCGGGTGAATATTTTGGTAC
ATTTTCTTGAAATTGTTACTCCATTCGAAGGCAAAAATTCGACAGATTTT
TTCAACCCTTAGAGTGCACTTTCTCTCATCTTTGCTCGTTTCGACCCGTA
CAGTACACTTTTTGAAGCCTGAAAACGCACCCTTAAGCATTTCACATGAT
CTTGGTCGCTTTCCTTGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006538TCONS_00006538Clytia hemisphaericatranscript
TCONS_00006537TCONS_00006537Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006538-proteinTCONS_00006538-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000067supercontigsc0000067:694612..697630 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.03	0	0.06	0	0.03	0	0.03	0.05	0.21	0.21	0.02	0.02	0	0	0.02	0.02	0.02	0.06	0	0.03	0.04	0	0	0.12	0.11	0.18	0.04	0	0