XLOC_003720 (gene) - C. hemisphaerica

Overview
NameXLOC_003720
Unique NameXLOC_003720
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000069:34936..43758+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003720 ID=XLOC_003720|Name=XLOC_003720|organism=Clytia hemisphaerica|type=gene|length=8823bp|location=Sequence derived from alignment at sc0000069:34936..43758+ (Clytia hemisphaerica)
ggaaaatatttcaaaatcaatttctccTTTTTCAGGATGAATTTAAATAA ATAAtgaccaaaattaaaaataattgaaattgaagCACTAAAATGTTGAC ACTTACTTTATTCCTCCTCAACACTTTCGTTGCATTTGGAAGCTCTGGAA AAGTAGGGGACAACTGCAACACTTGCAGAGATATTGTCAAGAACTTCAAA AAGGTAATTGTGTTCAATTAGCAAGTCTTACGTGAAAATATACAATGTCA TAATTACTCTTTACAGCCTTAGTTTTATCATATATTCCTAATGTTGATCT TTCCGTCTGTCATTATTGATACATATAAATCCTTATATACTTATTAATAT GTGGAATTAACAATCAtcataattttcttttattgaCTTTTGTTTTTAGG GTTTAGATAAGACAGCCAAGGACCATTTTGGTGGCGGCGACACAGCATGG GAAGAATCAAGACTTGGAAGTTTTGCTAGAAGGTAACTGTCAAACTCTTT TAGAAAGGTGGActctcaagttttttttttttttttatagattttgtctt tttgaccCTGAAAATAATTACTTCTATCATTGTCACTATAATCTGTATTG AGATTTCCCTTTCTGGTACTTTATGTAGTGAAACAAGGCTTTTGGAAATC TTGGAAGGTGCTTGCGAAGGAGCAGCTAAAGAggtaattttttgattttt tttaaaaggaaGGAAACACAAGGAGTTTTCTACTacatttttctgaaaac ctAGTAAACTTTTCATGTGACTGTTTAAACTAACAGTAATTTAGGATGTT TCAAAGGCTCAAAGTTGTGATTATTGATATTGAATACCTATAATTTTACT TTAGTCGAGATGCCATGCCATAGTAGAAGAATACGAAGAGAAAATTGAAG AATATTGGTTCAACAAGTGAGTGGTGCCTTCTACTCATCTTTTAAGAAGG TTATTATTGTGTGTGTGTTGTATTAAGGGAAACATAATTACAATGGAGTC Tccgtagcctgggaatccaagcgttaaactttttcatagtctagtttatg atatttttgctgctggtttaaggcttggcgcaggtaactcgcctgcaggg acatttttccctgcaatgcaggttcggcctgattggccagcttttggcgt attacttagcagtactttcgcgcgcattttgataatttcgatgcgtgcgg ataatttatggaaaaagctgactcggcagaaaaaaggaaaacaaatgaaa atgaaaacatagattcatttcgaaacaaaatggctgttggctggaagtct aaatacatgtggctgatgttttgatgtggtttttagtagttttgaaagtc tttagagcttgtgaaagaatggtaagttgattatgtgtgtttgcctgggt ttccaaagttcagcaagtctgtcaacaagggttcacacacaaaCTGTTtt taacattctgtgtcagactaatctacctgcaccaagctctataattttag aactttgtgaggtgaggtattttttgttttttttcaaagattatgagctt ggattcccaggccagagtctccgtaactcgaacacgcacaggGAACATAA ATNTTcaaagattatgagcttggattcccaggccagagtctccgtaactc gaacacgcacaggGAACATAAATTTGCCAGAGCTATGAATTAAGAAtttt aaggcattgttaactaaagtgaccataaaacttgttgttcgagttaagga gacattcgagttatagacgTTCGAGTTAAAGTGACTCCAATGTACACTGC TACTAAACCTCTTCGAAATACTAAGTGTGCAGAAAATAGGTTAGCCTATT TCAAGTGAATTCTTTTGCGTTCTTTTAgtttttaaaatagaatttCAGAA GTTTGACTTTCAAAAGGTAACACACCAGGTATTTCTTGAATGATATCACT GTTGTTCTcctttatcttctttttttttaccctTGTGATTGGAACGGAAA GTTTCACAGGAACtgtgaaaactttttttatttctctgtTTTAGACATAA AGAGTTGGACCAACTAGAGAAATATTTATGTATAGACACCATGCAAGGTA TACACTAACCTTTTACATGCTAGCTTTAATCCTCTTACAAAGTTAAAGCA ACCTGCTAAAATGCCATAGTATTCAATTTCCCCCATTCGGAAGCTcagta ggctacgtcatatcttccttcgtttcgagcgtaaaactcctactcttcgg gctatgagcactcctcttgttttgaatattgaaattctctaGATNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctagtggccgcct atagcagtgcctatagaccaagagtaaggcctaaaagcctggatctgtct attgtgtagactagaagCTCAGGAGACATtgtaaagaaacaaaaaaaaca acagcaaatctaacaaaaacaaatcaattcGAAAAAAGCACCTCCTGGAT ATTTTGATTCCATTATCAAAGTATTCATTCCCCAGCTGCTAAAAGTcgtt tcattaaatttttttcattttagcatGCTGTCCGGAAGGCCAATACGGAA AGGAATGCAAAGGTatgttctcattttcatttgaataTGCAAAGTCATGA CACTTACCTAGTTTTAGTATTGGCTCACTTGAAAAGTTAATAAAATATAA TAGTGATTTTTTCTAACTGAATAATAAGttttaagtttgttttttttcga tttcctTTTTGTTCAGATTGTCCTGGTGGATCGAAGTCACCTTGCAACGG TCATGGCACATGTAAGGTCGGTTTTcgaaaatcaaacttttttatttcat cgCGTGGGAATCTCTAAATGGGAAAGTTTCCTGGCTGTCCAAAGTCGAAG TGGCCTATCAATTTTTTCGTAGTTATAAACGCTacttaaattttcattta tctGAAGGTAAAGATGATAAAAACCACTTCATTCATATCGCTCAATGCTA AAGTTTGAGTGTATAATCCGCCTATTTTAATCATTCTTTCTAAAAGCATC CGGTTTATACCACTTTAAATCAAATAGTCAGGAGTTACGACCTATAGTCT GAGACTGAGTCTGagtattttggcttgttttggacgcatatacgcgtccc tcgtggtctaagggttaattatattttattttatttttgttgtagGGTTC TGGCACACGTGAGGGAAATGGAAAATGTAAATGTGACGACGCATACCAAG GTGATCTGTGTGATGAATGCagtgaaaaatattataaagaCACAAATGGC TCTTGTTTAGGTAAGTTTCACTTGTAAAATATACTCCTCACGAGATGCAT GTAATAAGATAAGACGATAATCGTAGAGAAACTGAAGTANCCTCACGAGA TGCATGTAATAAGATAAGGTAATAATCGTAGAGAAACTGAAGTAATCACT ATTACAACGTCTTTTTATCAGCTCTTTCGGAATAGTGTTTTGATCGTAGA TACGTTGCAAACGAGATCTAATTTCTTTCATGTATCTCATGAAAAACATA CTTCGGACTGCTTCGGATGAAGAGAGAAATGGACTTAGAAGATATTCCTT ATGGCATTTAACAaattttgacattaaaaaattgtatttctattttctaa CTATTTCCCCCTTTTTCTTTTCCACAGCGTGTGACGAGTCGTGTGAATCT TCATGTAGCGATGGTACGAATAAAGGATGTGATTCTTGTAAAGAAGGTTA CGTACAAGACGAAGAGCAAGCTTGTGTTGGTAAGAAAAATATATGAATAA AGACCTGGGAATGGGATGTGTTTGCTAGCAGGTTATCTGGTTCATTCAGA AGGATATAGGTATAGATGGATTTGATGATGATGGTTGGTTTTATTGGTTA TTGGAAAGAAAACATATAGAGcgctttctttaatttttaactCTTTCTTC CTTTTCCAGACAAGAATGAATGCGATGAAGACGACACATGTGTCGAAGGA AAATTTTGCGTCAATTCTAAAGGATCATATGAATGCAAAGGTGGGGCAAA AAACAATCGCTAAATATTTTATTCGATTAATCGCTTTGAAATACTGACGA GGGAGGGTGTTTTTGGGAAAGAGTAGGAAGTTGTTGGAAAATGCAACCCT TTCTAATTCAGTGTCATCACACAATGAATGAATAAACTTATTAACCAAAT TTTTGAACCTCAATACTACATACTGTCAGCAAGGATAGGTGCATGAAGCG ATGGATTTGAGACAAACTCTGCTTTGTTTAATCCGGAAAATCTTCAATGT TTTAGGTCAATCCACTCACAGTTAATTTATATCTCActtatttctttcaa aatgatccATCAGTAATTTTGACTATTTTATTGATAGATTGTCACGCATC CTGTGAGGGTGGATGTACTGAAGCTAGTCGTTTCAATTGTGTACAATGCA AAAGTGGATGGAAAGCTATAGAAGGTCAACAAGGATGTGAAGGTATTATA ACAAACCTTTTCCTACTAGTCTTAGAGCGTTCATGGGTGATCGTTATGAG TATAACTTCTTACTTTACAATATAATtgtgaagaaataaaaaatttctgt cCGACTCATATTCACTCATGGGATTTGGGTGGAAGAGCAGCATAAGCATT TCGTCTTTATTGGGACTCATCAGCACTGAATACTGCGTACTGCGTACTTT ATATATTTACATAACTTGAAAGGCACGCAACCAATGCTCGGGGatcgggt tttcgaaaacaaaggGAGGAATAGACCCCCTTCGCTCTATGGAAAATTCT TCACGAACTTTCGAAGAGGGCTTGGGTCAAATTATATCGGAGGTCCTAAA AAGTCAAATTTGCGACGCTTATTGTTCCATCCATGTTGAAAAGGGGGCTG AGAAGAATAGACCATATTCAGACGTTATTGTTTAGCATCGCTTCggtagt ttttttataaaattggaACAGCTCCATTCCGATGAAAAAGTGGACCTTAG CTGTTTCGATCCGTTATGCTTTGTCATGTCTTATGTTTTGACATTTCGAA CTTTCGGTGTCTACACAGTGTTTCGGAAGTGTTTCGTTTCGAATCATAAT GTCTCATGTTCGCACGTGAGGATTCCGTTTGGCTCCGAAAccaaatgaag ccattctactggttagaagtgacgtaaaacttgaataTAACCATTAGAAT GTCTTCATTCCGTTTCAGAGCGAATCGGAACCAtagcgtgtgaacgtggt ctGAACATAGTCTAAATCTCTGTCCCTCGCTTTCTTTTTACAGACGTCAA CGAATGTGAAGGAGAACACGGATGCAGTGCTGGTACATACTGTAAAAATA CTGATGGTAAACACGAATGTTTATCTTGTCATTCTTCGTGCTCCACTGAA GGTATTTATTTATGTAATCTAACGTTTTTAATTCTTGTTCTATTTTTCCG TGTTACTTGATCCTGTCACCATGTTATTACGTTAACAAACATTAATGCTT TTTATTTTCAACGTTTTCCATTCCttatattttcgttattttcgaCAGTA TTTGCTTATAAGATTCAAGAAAAAATGACCAAGAAAGTCGAATCATTAGA ATAATCGCTGCCGACTACGAGTAATACTCGTAATCATTCGTTTAATTACT GATACGGTTTCAAAGGGCCATAGCTTTTTCTGCATTATAACTTCTTCATT GCAATTTACAGTTTATTAAGGtttaaattttataagaatttgaagcaaaa taacaGGCCCTGGATGCCAGACTTGTAAAATAACTCCAAGTTTTCAGTTT CCAATCATTGGAACCCTTTCCTGATCCATCATATTCAATGTTTCCTTTTC aataagggctacttagactacacaatatattgaggAACAATATTTGTACG GAGTAAACAACAGGtactctatttataaaaagtaattttctttctttaaa aatccccctatattgttggaatattgcaaatcgagctgacattATATCGC GGACACCTTATCAATATATTGCTGGCACTGAGCAATATATCGTCAATATA TTGCCAATATGTTGCCtggcaatatattgtgtagtgtatgtagccctatA CTTATGAATCCAGAAAACATAATTAACAGAAATCTGTTTATGTTTATCTT ATTCAGGTTGTACAGGTGAAGGTCCAGACAAATGTTTAGTCTGTAGCAAT GGATGGGAGATGAACAGTGAGGAAGGTACAGGCTGTGTTGATGTTGACCA ATGCAAAACGAAAGAAGTGCAATGTAAACATGGGGAAGTTTGCGTTAATA GTGAAGGCCCTGATAAATGTGAAGGTaagatattattattattcagTGGC AGTAATTGTTAGCACAAggaagtctctttaactcgaaactATAAATCGAA TGTCGGGTTTGGGNTTGGGTCATGATTGGATGATGTCAAATATGCGAAAT AAAAGTCGACCAAACCCCATATATTCCTACCTAATCCCATAAATTTCTGT TCAACTCTTAGCGGCACGGTAATGCTTTAAATGTACATGGAAATTCTTTT CAACGACCTTATCGAAAATATAAGTGTAGGAGTGCTAAGAGTTGATTGGT GTATTGCGGTGTTTAGAGTTGATTAGATTTATCTTCAATCTTTGTCTTTC ATTCTTTTCATTTAGCCTGTCATGAAACGTGTAAAGAATGTGTTGGAACA GAGGCTGGTAATTGTCTCAGTTGTTATCCAGGCTTCGCACTCATAGATTC CAAATGTAAAGGTAATTGAATctggtttaaaaatttttggtttgCAATGC TGATTTTAGCAAATTATTGACTGAAGCCTTTACCGTACTTCCTCAAATAA GCAACTAGGCGAATTTGATCGATTCACGGTTTGAATCACTATCAAATTTA GGGGCTCTATTCTGTGGCTTAACGCACGATGAAGAATCGACGGATCTGTG ATGTTTTTCCTCCCTTAcgtaaagaaataaaaagcatTAGTTAGTAGTAT TATTTTGGTCTATTTATTTTGTCGCTAAACTATATTACCCGTTAAAGTTG ATCTTGAAGGGGTtgctcaaaaatatttgaagctaAAAGGGGGAAACGGA AGAGTGGacaatattcttttttttttctcttttaataaTTTTACTGTAAT TTTGGTATTCTTTTCCTTGAAGATATAAACGAATGTTCGAACGACCCTTG TAATGAAAAGACGGAGAACTGCAACAACACTCCTGGCTCATATTCCTGCA AATGTAAAAAAGGCTGGGTACGAACAAAACAGGGTGActgcaaaaagaag aaaacaaaatcaaagaagaaaaataaaaaaggtacGAAGAAAGAAAAATC GTGGAAAGATGATCTATACGATGATATTATGTCAGGGAAAGCGTTCGAAA AGGAGGAAAATTTCCGTAAATTTATGTACGGTCATGTTGTAGTGGCTGCA TTCTTGATGATCATGTATCGCTACAGGTGTTATAATTTGTTAGCACTCTC TGTGGGTTGTTATGCAGTTGTTGCTAGTTATGTTTATACTAGACATggga agaatattttttgatgcATTGCCTGCCATTGGAAGGATTTTAGCAATCAT TAGTGTATAATATTTCACATTTCGAGGCATATAGTACTATCATGCATTTT ATGATGTTCAGTATTCTCAGTAAAGCCAAgcctctctctctaattcgagt cTTCAacgtatctcctaccatttgctgacacagcatttttaaacaacaaT CCCCCCATACCGCGTTGCGTGACCACAAATATTgagaattcttttgttta ttttgcattATCAGTTTTAAAGCGAATATTTTTTATGATTCGAACAAAAG CAACActttaaaattgattaaaaaagctTTGGGTAATTCGAatcattgaa attgaaaattgaaattcaagaGAGCTGACTGACTTTACAgtgaatgaatt ttgaaattaattttgatctGTAAATATTAAGTAAAGTACTTTTTAAACGT AGAATATAACTATCTATACGATATCTATACGATATCTGTCTTTGTGTGTG ACGAAACCCACTGAAATTGTTATTTAGCTACTAGGAGTCTCGTATTCAGT TTAGTAGTTTTGTATACTTTATCAGATTTTAGGTTATTACAGATGTTTTA GCCTTAGCAGGCCTTAGTAATTTTATGTCGTTTTGCTGACGGAGTGTCTT CGAaagatttaattcaaaaaacttgattgtaacatttaattttcatttat ataTAATTTCAATTGACgacagttttattttattttcagaaatttaattt ctttttcatttcatttaattttcattcatttggatttttattttttcgtt ttttttttctgtttgtaGGTAATACAGAAGATACTCCCAaacaaaacgaa agtgaaagtactgTGACGTCATCTGATAAGGAAGATCCTAAGAAGACAGA GTTATAGTTCATTCTtagagttttttttaatatttcaaaaaatttcattc atacttaggattttcaaattttgtttaaaaaatataaatttcataaaaaa taattttgttaaaattgaaaAGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006562TCONS_00006562Clytia hemisphaericatranscript
TCONS_00006563TCONS_00006563Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006563-proteinTCONS_00006563-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000069supercontigsc0000069:34936..43758 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CRELD2PREDICTED: cysteine-rich with EGF-like domain protein 2 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
116.33 107.97 77.06 62.59 35.22 29.01 99.35 106.75 42.01 44.74 33.67 26.2 30.4 25.57 35.85 36.37 54.59 46.24 14.42 30.89 21.28 21.37 44.35 42.89 26.42 30.33 34.16 24 50.67 39.57