XLOC_003732 (gene) - C. hemisphaerica

Overview
NameXLOC_003732
Unique NameXLOC_003732
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000069:19758..25957-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003732 ID=XLOC_003732|Name=XLOC_003732|organism=Clytia hemisphaerica|type=gene|length=6200bp|location=Sequence derived from alignment at sc0000069:19758..25957- (Clytia hemisphaerica)
CTGCACACGTCCATCACGTGATCAAGTCGCAACCAATCAAAGCAAAACAC GATAATTCAAACTTTAAAACCTTTAAAATTCAGAGAATCGGCAAAAGTCA ATTTGTAGTCGTGTTGTGTAGTGGAAACGTGGAACTGAGTTGGACAAAGT GTCATACACAGTCATCCACAATGGCATCAAGAAAATTCTGGATGTTTGGT CTCTTGGCCGTCCTTTTTTTGTCATGTTAGTATTTCATTTTATTTTTTGC CTTTCTTACGACTGTCTCCTTCTCTTAGGCGCTATTTTCAAGGGAAAATG TTTCCTAGAGTTTTTTACAAAGATACATTCACATTGAATTTCTATCGTGT TAAATGTTCACAATAATTTTCACAACAGTTTAAAACTATTATCGAAAATA TTTACAACATGTTATAGGTACCTAGTCATTCATGTCTTTCACATATTAGT TTCAATATTGCTTGTTAGGCCCTTTATTGGGGAAACTGTAGGAAAGTCAA TTTCTCTGGGGTTTTTAGTTTATATCCAAGAATGGGTAAGGTCTATATAA CTGGAGTTTCTAGCTGTAAAGCTGGAAGTGAAATTCACCAATACATATGG TAATGCTTTCTATATTTATCATAGAATAGTCTTTCAGTGTAGGTATGAAT AATTGGATTTTATTTTTCAGGTTCAGTCAAAGCTGAAGAAAGTGATGACG CTGAAATCGAGACTCCCAAAGTTGATGAAGATGTAGGCAAGAGTCGTGAT GGTTCAAAAACTGATGATGAAGTTGTTCAAAGGGAGGAAGAAGCTATCAA CATTGATGGCCTCAGTGTTGCAGAAATGAAACAAATGAGAGAATCTTCTG AAAAACATGCTTTCCAAGCTGAAGTTAGCCGTATGATGAAACTGATCATC AATTCCCTTTACAAAAACAAAGAGGTAATTTTATTTATGTTGGTGAAAAA GTGCTCAAATTTCTATGAGAAATCACGAAAATATAGTACTTGTATTATTC TGGAAAATGCATCTCAACATTCAACACATGTTTCATTTCCTTTTTTTGAA TCAAATAAATTGCAGGTCATTAACTTAATTGCTTATAGATATTTCCTCTT TTCTCCTGCTTCCAGTTTTGTACTTATTAATTACATTTCAAAAAAATTGC AACTAGCAGCTGTTAAAACAACTTATACAAGTCTAGATAAATATTGAAAA TATCAATATCAAGATATATCAAACTAAATCTAGACAGAAGAGATTTCTTT CTATATGTTGTCATAATAGCAAAATATTTTTGGTGCTTTCTGTTTTTAAT TTCTTTGAATTATTCTAAAGAGCTTCATTGCTTTCATTCATTTCATGTTT GTTTTGAAAGCCAGAGGGCTTAAATGAAAAAGGAGTTTAGCACCAGAGAA CAACACTTTATTTTGCTACATAGAAGATAAAAGAGTATTGTTAAACATAG ACATTTAATGATCTTTTCTTTATAGATCTTCTTGAGAGAATTGATTTCCA ACTCCTCAGATGCTTTGGACAAAATTAGATTCTTGTCTCTTACCGACACA GATGCATTGGCTGCTACAGATGAACTCTCCATCAAAGTCAAAGCTGATAA GGACAACCATGTTCTACATATCACTGATACAGGTATTGGTATGACCAAAG ATGACCTTATCAAACAACTTGGTACCATTGCTAAATCAGGAACCAGTGAA TTCTTCTCCAAGTTGCAAGAAGCAGGTAAGAATTTTTTCTATTTTTCATG GTTCTTTTGTCATTTTTTTTATTGTGGCCGCATTATTTCATTCAAATAAA ATCAAACTTGAAACTAAGATATGTGTCAATTATTATTTTATTTTGAATGC TTGATTTTGTGTTTGAATGTAGAACATTTTCAGTACCACAATTGCTATGT TGGATTTTGCTGTTCATTTTCATTACTATATATTTCACTTTCAGGAACAA CTGATCAAGCCAGTGATTTGATTGGTCAATTTGGTGTTGGTTTCTACTCT GCTTTCTTGGTTGCCGATAAAGTCATCGTCACATCAAAGAACAATGCTGA CAAACAACACATCTGGGAATCTGACTCTGCTGAATTTTCTGTTGTTGAGG ATCCACGTGGAGATACCTTGAAACGTGGAACCCAAGTCAGTTTGTACTTG AAAGAGGAAGCTCGTGATTTCTTAGAGCCAGACACTTTGGAGAATTTGAT CAAGAAATACTCTCAATTTATCAACTTTAACATCTTCTTGTGGAAATCAA AGACTGAAGAAGTCGAGGAACCCATTGAAGAAGCTGCTGAAGAAAAGAAG GAAGAAGAAACTCCAGAAGAGGTAAAGAGATCAGAATTCAAATCCCTATT TTGGTAATTTTTACACTTTTGGCTAACTCATTTCTAAAGTCCCAAAATTT AAGTTCAGCTTTCATCCATTACAATAAAAAGAGTATAGGTTAAAAATCAT CCTTAATATTACACAATATATCCACTAACTTGTATACTTTTTCAGTGCTT CCTGAATAAGCTATTTTTCAAAATAGCTTTAAAAAAGTAGCACAAAGCTC CAAATATCTTTCAGAGAGCGTTTGTTTTAAATTTTGAATTTTTGGCTTAA CGCATTTCATTATTTTATGATTTAGAAGAAAGATGAGGATGATGAAGCCA AGGTTGAAGAAGAAAAAGAAGAAGAAAAACCAAAAACCAAGAAAGTCTCC AAGACAACATGGGATTGGGAAATAATGAACTCATCCAAACCAATCTGGAC CAAAAAACCAAAAGAAGTTACTGATGATGAATATAACGAGTTCTACAAAG CCATGACCAAGGTAATTTTCTAATCACAGTCTGTAGAATTCAAGTAATTT AATCACCTGATACCTTTCCCACATACTCATTTTATTGTAAAAAGTAAAAT TGTTAAAACCTGTCAGATTTTTCATACATCTTGGGTTATTTTGACCTTTT AAAATTTAATATTACTTAACATTTTTCCTTAGGAATCTGATACTCCAATG GCCAAGACTCACTTTGTTGCTGAAGGAGAAGTTACCTTCAAATCCATCTT GTACGTTCCAACCACCTCTCCACATGATATGTTTCAAGACTATGGAAAAC GCAGAGAACAAATTAAATTGTTTGTTAGGCGTGTTTTTATCACAGATGAT TTCCAAGACATGATGCCTAAATATTTATCTTTCATCCGTGGTATTGTTGA TTCCGATGATTTACCTTTGAATGTATCTCGTGAGCAACTTCAACAACATA AATTATTGAAGGTCATTAAGAAGAAATTGGTCCGAAAAGCTCTTGACATG ATCAAGAAGATCCCAGATGCAGACTACCTCGATAAATTCTGGAAAGAATT CAGTACCAAGTAAGTTCCCTCTGGAATACAACATGAGATCTTTTTATCCT CAAAACCTGCTTGCGGTATATAATCTTGATTTCTCTCTTGCTATGTGAGG AGTTTTTTGAAGTGTCTCATTTGGTTCTAAGTAAGTAACAGCAGCAATGT TTGAAATAACTGAAAGGTATGTTTATGAACCTTTATTCAAGTCAAATTAT CTTTTTTTCCTATACATCATAAAATTTGTTTCTTTAGTATCAAACTTGGA ATCATGGAAGATCAAGCTAACCGAACCAGACTTTCAAAATTGTTGCGTTT CAAATCATCAAATGATGCTGAAAAACAAACTTCATTAGCTGACTATGTTG CAAGAATGAAGGACAAGCAAGAACATATTTATTTCATTGCTGGATCAAGC CTTGATGAAGTCAAGAGCTCCCCATTCGTTGAACGTCTTTTGAAAAGAGG TGTGTAAGACTAAATTTAGAGCATTTATTTGTGTATTAAAATCAAAACCA AGTTCGATCTGCAACCTTCGTTGGCAAATTTATGGGGTATGAGAACTAGA TTAACTTTTGACTATAAGTATTTATTCTGACTGATGTTCGTTTTTTTCTT AGGATACGAAGTCTTGTACTTGACTGAGCCAGTCGATGAATACACCATGC AAAGTTTACCCGATTTTGAAGGAAAGAAATTCCAAAACGTTGCCAAAGAC GGTCTCAAAATGGGAGATGACACAAAAGAAAAGGCTAAGGTTGAAGAATT AGAAAAAGAATACGAACCACTCTTGAAATGGTTGAAAGAAGACAGTTTGA AAGACTTGATTGAAAAAGCTACCGTCTCTCAACGTTTGACTGAATCACCA TGTGCCTTGGTTGCCAGCTCTTATGGATGGTCTGGTAACATGGAACGTAT CATGAATTCACAAGCTTACGCTAAAGCTAAAGACCCAACTCAAAAGTAAG TTCATTGAACGATAAGAATTTATAACCACCTCTGTTTTGTTCTGACAAAA TTGTTCTGTAAAATCTATTTTCGTCTGAAATGAAAATTCTTTTTTGCTTA CTAAAGGAATATCTTTCTTGGCTATCCCTGTAGTATAATCTTGTTGCGAA TAAAAGTTGAAACTTAGTGGGCATAAATTTACAAAAATAATATACTTCAA GTTTGGAAGTACAGTTTCTCTATATAGCTATTTTAAACTATTTTTTTCAG CTTCTATGCTACCCAAAAGAAGACTTTGGAGGTTAACGTATACCATCCAT TGATCAAAGAATTGCACAAGCGTGTTGGTGACAACAAAGAGGATCAAACT GCCAAAGATCTCGCCCGCGTCATGTTCGAGACAGCCACTATGAGATCAGG ATACGTCATCAAGGATAGTGCAGATTTTGCTGGTCGTATTGAACGCATGT TGAGACTTTCAATGGGTGTTGATTTGGATGCTAAAGTTGATTTACCAGAA GAGGAAGAATCTGCAGAAGAAGAAGCTACTGAAGAGGTTGGTTACTAATT CGATTTCCACGGAGTATACAATTTTCATCGAATAGTAGAGCGTCGTTTTT GAGAGCTTCTTGTTGACGGTGACTTTTAATTTTATCGAATAATGGAGCAT ATCGAATAGTAGAACGTCGAATTAGAGAGCGTCAACTGTACTTTTCAATA TCGTATCATTCGACGTTATTCAAATTTCACCGAAGTTAGTTCTCGACAAT ATTAGTTCGTTCCCTCTACTAAGGTTAATCCTGGTTAATCGTGTAATTCA TTTGGGACGAGACAGGAATTCTAGAATTCTGTGCTTGTGGCCTATTACCT GTTTTCTCGGGTTTTTTCGTTTTAAGAAGTGTCCGAGGTTTCAAAACAAT TTTTACTTATTTCTCCAGGTCAATGCTGACAACGAAGAAGAAGATACTCC AGTCGATATTCCTGAAGACGCAAAGACAGCTGATCCAGTTGATGCTAAAG AAGATAGTGCCGAAGGTGAACAAGAAGCACCAGCCGAAGCTAAAGATGAA CTATAAAGTGTTGCTTTGCTGCCTTAGGCCTTTTTTCAAAGAGAGTATGA ACTTAATATAGTTGGGTTGTTACCAACTTGTAACTCGCGATCTTAGTACC ACGCAAATCAGTTCAAGAAGAACCTGTTGAAGTTATCCTATCAAATGCAC AATATTTGGTAAATTCGTTAATGGCTTCTATCTTTGCTCGGGAGTTACAT GATAACATTTATCGTTAGTTTAGTAGAAGAAATTTGGAAACTTTGCACCG GCTTTTTGGACTGATTTGCTATTTATAACAAAATATAGAAACCTTTTTTT ACAATTTTAATATTATATTACCAAAGCCAATTTCCAAAAAAAGCAAACAA TTTGTACAAAGTATTATTTACAATTTTTAAAACCATTACAAGGGGGAATA TTATTTTGAAAATCAGTCAAAATCTATTTTCCGCTATAATTCTTTTGAAA TTTCACGTTCCGTTTTTCCTTGCATTTTCATATTTTCCCACATCAAGTTA GTTGTTAATTTATTTCAATTTTATTGTTGTCTTTCGTTTATGTGGTAAAT TCATTATAATGGACGTGCTATTAACAGAAAAAAATATTGTACAGAATATT ACATTTAGGATAATGAAGTGAGAAATTGGGAAAAAAAAACTTAAATTTCA AAAAATCTAAATCGTTATTTATCTTTGGTTCGTACCAAAACGGAATTCTC ATCGATAGTTTGGGGGAATTTGTTTGATTTTTTGAGGTCGCTCGACTTTT TTAGTCAAAGCATTTGTTATACATTTTTGGAAAGTTAAGGGATAGGGGAA TCAAAATGACAGGTGCCAATTTTTTTTCTCGGTCAAATATGACGGTCTGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006607TCONS_00006607Clytia hemisphaericatranscript
TCONS_00006606TCONS_00006606Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006607-proteinTCONS_00006607-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000069supercontigsc0000069:19758..25957 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
HSP90B1endoplasmin precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
292.52 256.67 182.3 159.27 97.9 79.14 499.81 521.25 247.26 266.42 246.3 200.53 223.58 151.77 214.83 232.7 316.82 265.7 69.82 201.08 115.76 127.06 246.92 257.11 185.04 242.35 207.51 135.49 225.03 168.83