XLOC_003770 (gene) - C. hemisphaerica

Overview
NameXLOC_003770
Unique NameXLOC_003770
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000070:157040..160540+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003770 ID=XLOC_003770|Name=XLOC_003770|organism=Clytia hemisphaerica|type=gene|length=3501bp|location=Sequence derived from alignment at sc0000070:157040..160540+ (Clytia hemisphaerica)
CAAAAGGATGCCAAAGTAAATTATCCGAGATCATTTAAAGGTAATTGATT
ATATAATAGAACAATAGTTTGGGTGCTATTATCTGATTAAAACTTTATAA
CCCCGCATATAATGAGAGCCGTTTTATTTGATACATTTCAATCAATCTTG
CATTTTGAGAGGTACGGGTGCAGATATTTTGATTTGTTCCTGCCGGAAGA
tcaacatgaaattttggattGGATTTATTGGCGTTCTTTTTGTAATCGGT
AAGTTATAAATTGcagaagatttttgaaaaattcatctCAACGGAGGATA
TCTCTTGTTTCACCGATCTTTAGACATCCCTTAAGgcattgtttgaaatt
gttGGAAGTAGCAACCTTCGAGtacaataatatttttcaaaacctttcca
AAAAGCTACAGCGATGCTTTAGTCGaccctatcgtctacacaaggtCACT
ACAAAAAGGGAATAATTTAGGAGGCGGTAAATTTGATGATGGAAGTGGTG
GAGTAAACAGTGATGGTGGTACGTTTTCTTTATCTCTAACGGGCGACAGC
ATTGTCTTTAGAAACTTTGATCGAAAATTTGAGGATTCGTTTTATATTTC
ATTTCGTTTGAACGTTTGAACAAGGCTGTCATTGTTATTGCTTTCGATCA
AACAAGTCGATCAAAACTCTACTTAACATCACATTAACGCAGAATTGATA
TCTTCCTCTTAACTTGCATAACCCCGCATACTAAATACTCtagcaaaatc
tttaaaatcgaATCGTTAATTGGTTTGTGTTTTTCTGAGACCGCAATCAG
ATGTTATTTTAATAGGTGTCCAAAATGAGGAATATTGAATTGCAATTTAA
ATTGCTATAGTTAGGATTTATCAGTCACATGGAAATAGTTTAATAACATT
CTTTCATGAAAAATGATTCGTGAACATGATTCAAATTTGTCCATTGAAAT
AAAAAGACATGTATGTCTCAGAGGAATGTCTAATGAAAACGTGAAAATCT
ACCCCTGTTTACgccattttaaaatttatgattcGATATGCAGCCTTAGT
TTGCTCTACTACgcccatcagtaaaatcaaaaggtTAAAATGTAAAGTAG
TCGCTCTTGATAACGGATGTATTGAGCGGAGACTCTGATGTTAGATAGTA
AAAACGACGCACTCCATGTCTCGCATGCCTCACATATATCTAGGTACTCT
CATCTAACCGTAGCCTATTCTAGACGTCACTCGcattttttctacgcaat
taacagAATGAAAAATCCCGGCTTTTGGTGAGGTGTTCGCTAATCTAACC
ACTGTCTTCCACTTTCTTTTATTTACTACAGATGTCAGTGTTGCATTGAC
AGCCAAACCAGTAACTGGCGTTTCACCTCCACCCATTACTTGTCCAAAAT
CTTTATGTATAAATCGGACGGATGGGAATTACGCTTACCAACTTAACGGT
GCCAAGAATGATCATTATTTTTTACAATGTTCTGGCGGTGAAGCTTCATG
TCAACCATGCTTTCCACAATCGTTGGTTTTCAAAGAAGAATGCAACCAAT
GTTTGACGTCACTTAGATGTAAGTTTACTACACTACACTCTTAACTAACA
ACAACGTCGTTTGAAAGTAAGGAAGTTAGGAATCGAGTTCGTAGCGATGG
TCGAATGGTCAAGGCTTCAAAGCATGAAACCAGCGGGTTGCTGGTTATTT
TAAACATCCATTAAACGGCACCTCTAGACATCCCTGTCTCGCAATGCAAT
GATTGTCTtggacacccctgtctcacagccccggtgaaaatCTAGTAGAG
atgattttggagtgcaatttttaacattgaatttcgaatagggatgaaat
caaagtcaatttcccagaaATTCCAGGCTATTCTTCcaaattattgtcaa
attttccagtggagctggggtcccagcgggtgtGTGACACAGGGCTGTTG
TTGGGAAAATGGGGCCAAGATTTGACCCTGAAACTTCATCCCAAGGTTAA
GGGAATCTAAATTTCGAAGTTAAAAGGCTAGAAGCTTTGGTAATAACTTC
ATATTCTATTTTTCAGCCGAATGTGTTGATAACGGTCAAGGAGTTCCACT
TCCTGAATATTTTTGTCCTGACAAATGTGGACGAGAAGGTCTGCCAGAAT
TCTTCACTGGCAATATCGAAGACCCTTACAATCCTGAACATTACGTTGTT
TGTTTAGCTGGAAAACTAGCTGCTTGTATCAAATGTCCCGAAGGTCTGGA
ATTCAATGAGATGTGGAATGCATGTTTATACAGTGGTAAATATAAAACCG
AACCAACACAAAATATTGTGGACAACGAATCTGACTTTATATAATCCGAA
ACAGGATAGTAAAGATAAGCTATGTCTCAAAATAATGAACTTATAAATAA
CCCATTGGACATATATGTCAAAACAAAGTGAACTTTTCAGGATAAGTAAC
ATCCTATTGATAGAATTGATTGATCATTCTTTAATTTCCCAAAAGGAAAA
GGAATATTAGTTTTTGTTTACTAGCTAATAATGGCTGCCAATCTTTCCAC
CCCTCGTATTTACGGAGCTCCTGTCGGTATGGTGTATTGTGAATATGAAA
AACCTTCTCCCTTGAATACTCTAAAGGACTGACGATTACTTATGTTGAAA
AATGAAGTTCTGCTATAAGGTATTTTCTATAAATCTAGGTAAGTTAGCTT
GTCGTCTGAATCGCGGGACTCTATAAATATACTTtctataagaaactctt
ttcgctagaggattaGCAGAATGCATGTTATAATTTTCAACCTGATATAC
CGATGAATATTTGTGGATTGAGCAAGTTGAATTTTTCTTACGGTAAATTT
AAGTCTTACGGTAATTCTTTAAAGTTATGGTAAACTAGGTTAAATTTCAT
GATTGAGGGTGGTAGGGCGGTGAGAGAGGTAACTAGAAAACGTAAACAAC
TTTCAATAATTGTCATCAGTTGGTCTGGCAAGTGACGTTTTACAAATGAA
TTTGTTGGAGTCACAGGTGCTCGCTAAACAGGGTCGGATACAGGAGGTAG
GCTATCTTATTCATGACATGGAGAGTAATTAGTTTCCATATAAGGtaata
cgataataaagtgcactctcctccattggttatagcctccctctgtatcc
gagcctgctGAAAAGACATTGGTGATTGTTTTCCGTTCAAATTATTAAAG
TATatcttttttttgtaatttttaaataaaCTATATATCcgattatattt
tttgttcatccaATTTTTAGCTTATTTCTTCActtatattttcaaaagaa
tcttTCGATTGGCATTTCTTGATGataatttttctgatatttcAACTAAC
gataaaaagaaaagtatgtAATTTGTATTCTTAAGGTAGTTTTTGTAAGA
TAGCCATAATTTGCCATTTTTTAGAATAAATGATGAATTATATTTATTgt
aagatatttttgaaaatattttgaagaaaattaaaaaaaagttgttttct
c
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006726TCONS_00006726Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000070supercontigsc0000070:157040..160540 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.21	0.13	0.14	0.19	1.91	0.69	0.45	0.45	0.14	0.48	0.06	0.22	8.38	7.7	19.44	5.12	2.01	2.03	0.13	0.26	0.08	0.09	0.07	0.09	0.09	0.04	0.17	0.15	0.12	0.12