XLOC_003799 (gene) - C. hemisphaerica

Overview
NameXLOC_003799
Unique NameXLOC_003799
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000070:502958..510579-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003799 ID=XLOC_003799|Name=XLOC_003799|organism=Clytia hemisphaerica|type=gene|length=7622bp|location=Sequence derived from alignment at sc0000070:502958..510579- (Clytia hemisphaerica)
AGCGATTGGACATCGTGGTCCTCGTGTGAAAACAATCAGATGAATCGAAC
ACGTTTTTGTAACGATCCTGCACCAATTCCAGCTAATTATTTGACTCGAT
GTTATGGTCTTGATCAACAATTAAAATCCAGTGAAACTCAGTATTGTACA
GATTGTTCAGGCTGTGTCTGTAAGTTTGTTTTCATTTTGTTAAGAAATAG
ACTAAATCAAGTATTAAATCATTTTTCCCGGGCCATTGTCATTCAGATTA
TATGAAAAGATGAAATTCAGGAAACTGTTTGCCATACCGATAATGTGTTG
GCATTGGAATTGATTCTTGTCATCAGATGGAGCATGAAAACGGAAAAAAT
ATTTACTTACAACAAGTCTTGTACTCAAACACACTAAAGGTAATGGTCAA
GTTCGAAATCCTGTCAAATCTTTTACGTTTTGACTACTACTACTATCTTC
AAACTTCAAAATTTGACTTCTCCGTATGGCAGAATTCTGAACCTCAAATG
CCTGTATCTCAACTTGATGTTGTACACTTCATTGATCAGAACTTTAGTCT
CTATCCGATTATTTTCATTGAATTCAACTTTGAAAATTTGCAAGGCCTTT
CTGACGTGCTAAAATCTACTTTCGAACTAATCACACGTACTCTTAGGTGT
CAAATAAACGGGGGCGTTCGAATAAACGGAGGGGGGTTGGAAAGTTTTCG
AAATTTTAATAAACGGGGCGGGGGAGACCTAATTGCCGGGGGGGTTTGAA
ATTGTACTTCTGAAAACCCCAAAATAAGGTAAATATAGGCTAAAATCAGG
CTTTTTGGAGCAAAATAAGGGGACTTTTGCCAACTGAAAATATTCTTAAA
AATTAATAAATGGGGGTCCTAAAAAGGTCTGAGGGGTTGGAAAATTAACA
AGCGGGGGGGGGGCGTTTATTTGGCACCTAAGAGTAGCCGGATTCCGTCG
GATTCAAGTCACAGAATTTTAACTCTTCGAACATCTTCCTATTTTTTACT
AGGGGAGCATCTTAGGGGGAGGGGCTTGAGCCCCCCTTAATATCTTAAGA
TTGAAAAGTGCTATGACCTTGAAATTTAATGATTTACAAAATTTTGGTTC
GGCCACCTATATGGTTGGTATTTTGCAGACCAAAATGTAAACTTGACCAA
AATCATGTATTGGCTGATTGACTCGTTTGATTTGACTGAAATTTGTTCCT
GAAGGCTGATTTGTCAAATAAAAGAGAATACTAACTGAAAAAAGTCGTTG
CCATGAGTATTTGATACTTTGCACACCGGTCTGTAGAATACTAGTTGACC
AGCTGCCGGAACTCGGGAACTAATTAAAAGTTTGAAATTTTCACAAGTGA
TAGATATTTACCATCTAAGACAATGTAAAAAACAGGTGGAAAAAAATTGA
CCCTCTGCCCCAAAAAAACATGTCGTGTAGAGTAGACTGGCACGCCAGTC
GGGCTGGAACGGTATCACGCGGGAAAAGTGAGCGTAGGAGTTAGGTAAGC
GTAGGAAGAAATTTTGTCGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTATTGGAAGTGCTAC
AAACTTTTGTGAATATCTACCTGGTTATCCCTTTGTTTTGAGTTTAATAC
GTACTGTATCTATCCCTATGATAAAATTACCCAGTTTTGAGGAGAAATAA
AGTCATGGTAAAGCGGCACTGACAAATTTCTCCAAAAAATATTTTCTTTC
AAATTATGAAATATTAAAAGTCTTCTTACATCTAAAAATGATTAAATTTT
TTCGCCATGCTTATGTTTTACTCAATTCTAGTATTTTTTCCAAAACTTAT
ATATACCTACGTAGAGGGAAAATTAAAGAATTCTCAGTTTGGCAACAAAA
ATTTCTCAAACGTACTGTACACATAGTACCTACTATAACTTTAAACATTT
ACATATTTTTAAATTGCCAGATTAGTGTGGCAAGAACAAGTGGATTTTTC
ATTCAGCCATAAATCTTCAAGTGTGAAGTTAATTTTATAGTACACATACT
TACAATTTACAGAAAAATGGGTGATAAGTATATGTCACATGTTCAACAAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTTGACAATCCACTTGTTCGACAATCTATATAGTTGTTCAACAGACCAG
TTGTTTGAGAGAAGAGTGTCGAACAAGTGGTCGTCGAACAACCATGCAGT
CGAGCAAATAGGTGTCGAACTAGTAACTGTCAAACAACCGGTCTAACAAA
TGTACCGTTGGACAAGTATACTGTCGAACAAGTGGGATTTCCCCAAAATT
ATAGTTGTACGTAGATGAAAATTTGTCAGAATTTATATTACGGTGAAAAT
TCAGAATTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AAAATTAGTGTGGCAAGAAAACTCCCAAAAAAATTTAGCCATAAATCTTA
AAGTGTAAGGTTAATTTTTCAGCATTTTTGGTGTGACAAGAAAATTCTTC
AGTGCATAGCCACAGTCTATAGAAAAGGTCAGAATTTACAATAATTCTCT
TCTCATGACAAAAATACTGCATTTTTCTAAAATCATGAATACGTGTACCC
AAAAACTTTTCTGTCACCATATAGACTCTGGATTTTCTACCAGAGCTATC
TTATCACAGCACTAAATTCTGCAAATTTCAATTTTTCACAAATTAAATTT
GTACATGACAGATGTTACATTTTTCATTCGACAGACTGAAAAACTTAATT
ATAATAATACACTTATAATAATAATTATGCACCAATGTGTCATTGTTTTG
AGGTTGGAGTTTTAGTTTAAGTTATTCAAAATATGACATCTTAACTATTA
AAAGTAAGTACTTTTCTGTAAGTTTTCCATTTAATTTTCTATGTGTACGT
GTAATTTTCCTGTGCTTGGCTGGTACGTTACATNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCAGT
AATGACATTGAGAGTGATGAGAGGGATAATCTTTGGAGTTTCTTTAAACT
AACCAGGAAACGCTGTTTATTCTCACGATAACCTAAAAATAGTTTTCAAA
CTGTACCAAAAAAGTTTTTTCTTGTAAACCTGTGTTAGATTATCGTGAGA
TATTAAAAGTGTCAGAATTATTGATTATTATGATATGTTATTATTCTTAA
AATAGTGTCAAAATTTTTTCAAAAAGGTTATTTTGTGGGGTACTTTTGAG
CAGAGTTCCTGCCTGGTTAGTGTTACTGTTGTATTCATAGAAAAGAGTGT
TGGAGGGGTTCACTTAGCCACAATGAGACTAGAGTAATCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGCCACAAT
GAGACTAGAGTAATCAAGTTCCTTAACAAGTAGTCTGTAAGTACTAAAAT
AAAAAGCAAAAAGTATTTAGGTGGAACCAAAATAGAAAAAATATTTCTTA
CCTTGAATCCTAGGCTAGCAAAAAGCCACCAACCTGCATAGGGAAAACTG
AATAATCCTTGTACGCTTTTGATGATTGTAGAAAACTGAAGCTAAATTGC
AAATACTTACCTTTCTAAGAATGTATGAATAACAAAAACAACTANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCACCAACTTT
TGCTCGCTCTCCTACGCAGCTCCTATTTTAGCAAACGCCCGCCGCCTTTA
TGTTCCCGCCCTCTGACATGATTAATTTACAGACTAGTTTGCTAGTCTAC
GTGTAGAGTTACCTCACAAGATTTGGGCAAAAAAATTAAAGCGAAAAAAA
AGTTAGAGGGTTTTTCGGTTTTTCGGTATTTTTAAAGAATGATGACATCA
ATGATGCTGAAATTTTCACCAATGATGCCGATTCATATTTGGGTGCACGC
AAAATGTCAAATCAATTCGATAAATATTTGAAAAATTATACAAAAACTTC
ATTCTAGGGAGTTGCCCCCTCCCTGAGATGCTTGAAGGGTTAATGTACAT
TTTTTAAATTTTAGTACAATCACACATCACGTGGATCGACGGTGGCACCA
CACAATACGAATCAGTTGATGAAAACATGCCACCACTTCAATACGTCCAT
CGTGTCAATACCGTCAAAGTGTGCCATAGTGTGCAATTCCGAATTCAAGG
CGGTGATGAACATGGGCAATTTTTTATTGATAATACGGGCCGTATCTACA
CCTCGACGCTCTTGGATCATGAAACAAAATCGCATTACAGCCTGAGTATC
AGTGTTTACTATGACAACGATGTAAACAAGATTGCAACACCTAATGATCC
TATTGTGAACATTACAGTTAATGATATGAACGAAGCTCCATATTTCAACA
CAATACATTACCAAATTCATATCTGCTACGAGCCGGTCTTTAATGAATCC
ATTGATCATGTGACTGCTCTTGATCAAGATGCAAATTTCACCAATAATGT
ATATACTGGAAATTCAACAATGGATGATGTATTTTATATCAACGAAACAG
GACACATCTTGAAGGGACATAAAGATTTAAGATTGGTTGACGCTGATGAG
TTTTTGATCATGGTCCAAGCATTTGATGCGTCAGATGCAACTCTGGCGAG
TACTTTGGTTCCTGTACATATTCATTGGTGTGACGTCAACATTCCTGAAT
TCGTACAACCATTAACTCGTAACTTCAGTATTATTGAGAATGACGAATCT
TTCGTTTACCAAGTCCAAACCACAACTGCAGATGAACATTTTTATATTGT
AGAAGGGAATGAAAATGATTATTTTCACCTCACTGAGAAAGATGGTAATC
TTACGATAAAAAATCCTCCTGATCGTGAAATAAATGATTTTGCACGGTTA
ATCGTCCAAGCAATAAGTCTTTTTGGGAACGGTGTAAAATCTACAGCAAA
CCTGACACTCAATTTCCATATTCTTGACACCAATGATAACATACCTCAGA
TCACCTCAATAAATGATCCAAGGATATTTTATACAAATGTAACTTACATT
AATGCCACATTTCCAGCTTTTAACGCTACAGATCCGGATCTTGGTAACAA
TGGTACTTTAACTTATGAAATTACGTGGAATCAATTGATTTTTCCATCTG
TCTCTTTTTTACCTACTGGACAGCTCCGAGTAAATGGTCAGTTTAACATA
TCGATGAACATGCATATATATGTCAGTGTTTGCGATCAAGGATTACCACC
AAAATGTCAGTCCGCCTATATTGGGCTCAGTAAGTTTCACCTTTCCTCCT
TTGTTGAAGTTTTAAACCTACTTCCCATTTTGTCTTTTTTCGTCAGGACC
AATCTGGTTTTCGATACTAATTAAGAAGGATTTTCGCCGACAAAATATTA
CATATTCAACTTTAATGAATTCGATCATTCATTTAAAGTGATTACTATCA
GTGCTAAAGACCTCCATTATTTTTTTACCTCCCCAAGTCTTTCCAAGGCA
GGGTTACAAAAACAACAAAAAGTCTCTCTCCTCACTTACATAATTTATCC
ACTTGAAAGTGATGGCATTGTCATATCTATCCACTTGTCGTTTGCCAATT
GAATCATTTTAAGTCCACTGTTTTTTCGATGACCTTATTAAGTGTTTTTC
GTTGTCGACCTCGGATTTTTTTGAGAATTTTCTCTCTTAGGGTAAGTTTT
CGCAAAAACTGTTAGTTTCTCTAATTGTCGGTTTTCAGAGGTTTGATCCG
CACATACCTGACATTTATCAACTCTAACAGGAAATTTGAGATATATGATA
CGAGCCCTCAGAATACATTCGGGATGTGTCCTACCCATGAAGTAGTAGGA
ATCACGGCGCTGACAGACACTGTGACTTGGCAGACGTGAGCTGTAAAGCC
ATGGCGTATACCATGACACTCGAACGACACTGGGAGAGCGATGCTCACGT
GAGGCCGAACCTTATGAGTGCCATGGCACGTCGCAATGTCTATATAATCT
ATCCACACTCTTGTATCAGAGTAATGGTATCCAATTCTCCTCACATGGCA
TGGGTTGCCCCGGGCGAAGGTATATTCACTTGCCAAGTGAATCGTAGAGA
TATGGGGAGTATCGAACTCAGGCCTCCCAGGCGAGAGTCAGGGATGATAA
CCACTATACCACTACGCTTATACGGGAAATTTGATGCGTTCAATAATCTT
CATTTTGTAGGAATCGACAGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006797TCONS_00006797Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000070supercontigsc0000070:502958..510579 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09	0.12	0.03	0.03	0	0	0.04	0	0	0.03	0.06	0.02	0.42	0.35	0	0	0.07	0.07	0.16	0.6	0.12	0.3	0	0.03	0.71	0.32	0.29	0.13	0.07	0.03