XLOC_003888 (gene) - C. hemisphaerica

Overview
NameXLOC_003888
Unique NameXLOC_003888
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000072:605995..613211-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003888 ID=XLOC_003888|Name=XLOC_003888|organism=Clytia hemisphaerica|type=gene|length=7217bp|location=Sequence derived from alignment at sc0000072:605995..613211- (Clytia hemisphaerica)
CTCCAAATATGGGCCGATCCAAAAGTTATTGGTTGTCACTCGTTGCTCTA CAATTGATATTAATGGCATTGCCAACTTGGTGCTATAGCTGTTCAAAGGA GACTGTCACTGGCTCTTTTGGCTCTTTGTCTGGTGGAAACAAATATGGTT GCTCTAAAAAGACTTATGATATCAACCTTGGTACTACAATGGCTGTCAAA ATGACTTGGTTGACTTTTGATAATATCCCTGGAGATATGCCTTACTGTAG CGATGGTTATATCAAAGTTTATGCTGGGTATGTTTTAGTCTTTTGTGAGA GAGGGTGTACGTTTTACGATACACGTTTTTTATGTATTGCGGCCAAAAAT CTATGATGGTGGTGTTTTGAGCATTTTCTTAAATTTTTTGGCCATTTTCA TCATGGGTATTCTTATATAGAGTATATTCTTTTTTTTTAAAGCATATGCT AAAGCTTGACATACAACATCATTTCAGCATTCATTTACATTTTGACATTT GATTCTGTTAAATTAAATGACAAAATCCTTTAAATGGACTTCTGAAGCAT CAAGACTTTTTGCTTTTGAAGGCTTGGGAACAAGAGTAGTTTTTTTCGCA TTTGTGCTATGCAACATGCTCCATCCCACCAACCTGAAACGCTTTATCGT GTCTCCACACCATTTTTCGTTCTACCAATAAAAGTGAAATCTCAATTTTG TCCCTGGGACAAGATCAGCGTGTTTCCCACACTTTTTATCCCATGAAACA AAAAAAGGAAACCATATGGGACACACACTTTTTTTCTTGTGTTGGTTGGA TAGAGCATGTTGCATCGCAACAACGCGAAAAAAAACTTCTCGTGTCTCCA AGCCTTAAGTATTGAAAGTTTTATTTTTAAATAAGAGTGATATCGTTTGC TTACTCGTCAATTCTAATTTACAAGCTTTTTTACATTGAATTGACAATGT TGTGGAGCAAGATTGATCAGAAAGAGGAAAAGAAAAACAATTTTTTGTTT ATTCAGCACAGTATAACAATAGGGAGACACTGTCCTGATATGAAATATGT GTCTGATATGAAACGGCAACAGTTATGTAAAAATAAAACCTTTAAAAAAA ACTTTGTTGTTTCATATTCATGATATTCATGACGTAATGTTTTCTACGGA AATATCCCGGTTTTAGCCAGTAGTGACACTTTTAAACTAGACAAAAGGTA TATAAAAGTGCCACTACTGGCAAAAACCGGGGTCTTTCCGTAGAAAACAT GTCATGAATATCATGAATTCCGTCTCTTTTTTTAGATGTGGACAATATTC ATGGGACCGAACAGAGATCGCAGAATTTTGTTCAGGAAACATGATTTCAT CTCTCCCTCACGACATTTATGCGTATACAAATTGTTTGAGATTGGAATTG AAAAGTCCTTACAGTTACTCACCGAAAGGGACATTCTCAGTGACTTGGAG TCAATATTCGTATGGTTTGAGCTCATGCACGACAGGCTTAGAGTAAGTAA AGAGTAAGTCTGCGACCGCAGTCAGAGGCGACCTGAAGGCTCCTCTTTCG ATAGCTATTTACCCGAAGGTAGGGGAGGGCGCCACTCTTTCTCCCTGGAT TGCTCCACTTACCCTTGATCCTTTTCTTAATTGTTGAGTATCTAGTAGAT AGGCATCAAGTACCATTTTGGGAATCTTTGGTATGACCCGGCTGGGGGTT GAACCCACAACCTTGCGCACCGTAGCCGGATGCTCTACCACTGTAGTACG GTCGCTACTGCGGTATAGCAAGTATTCACGATATTCATGACGTAATCTTT TGTACGGAAGCTCTGAAAATAGCCTAGGCGTTTGATACTGATTTTATTGT TTGGATTCAAATTACACGTTTTTTTTCTTCATAAGAAACAACTATGTAAG AACACAAGGCTCAATGGATATTTTAAGGCTTGGTGGACTCAAAAACACAC TATTTCTTAGGAAAATTGTCAAAATAAAAACATGTTGAGAACATTTTTAG GCTTAAAAAAGTTAAGAACATCCGAAAGCTTCAAAACTTTTGGATACTCT TATAATAAAAAATGTTCAGTGGCAACCACCCGGGCTATTTTGGGTGCTTT ATTATACATTGTTAACCAGTTACTTTTCTGAAGAGGGCTACACAGCTTTT TGTGCAATACAATTGGTTCTTTTTGCATGACGACGGGCCTACATTGTCCA GAGTTAGGAAAATTCATTTTTGTGACGTCACATGAATATCATGAATAAAG GCTTGGTCTAGATCTACAATCAGCACCGAAATATATGTTGGCAATTTTGG GTATTTTAACGTATTTTAACGAATTGCAGTTTCAGTATTTCTACTTAGCT TCATTGGATTTTTCGATTTAGGAGGGGTTAAGTGGCTTCCAGGCTATATT ATCTACCTTATTGGAACATTTTTGAGCTTTTAGATCCTGAGATCCTAAAG TCTTAAGTGTAGTGTTAAAACTCTACTTCCGAACTGTACTTCAAAGCACT TAAAAATCACATGCGGTTTTAAAACTTCCCCGTAAATTTCCCCTTTTTCT CAAATATTATGACCTTGATTGTAAATCTATAGATAGTATTGATAGATTAC TTGGACCTCCAAGGAAAACCTAGGACATTTTGACACATTGTTTTTGATGG GGTCTGCGTTTTTTAGACTGAACGGAACGTGGGAGGAATGGTGTTCTCAT TGGGATAACGGCTTTGCGACCTGAAATAACTTTGGATATTCTCTGTAAAT CGAGATCTCTTGATCCCATTGCTGCTATTAGGACCGTTCGTTCGTTCGTT CGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCG TTCGTTCGTTCGTTCGTTCGTTCGTTCGTTTGCTACCAGACTTAGATTAT TTCTGATTCAAATACACAATGATTGAAAATGGTGATGTTAAAAAGAAATT TCTCCGAGATTTAATCATAATTTTTCTCATCTTTTTTGTTTTCACCTTTT TAGTACTAAAACCTCATCAACCGGAGTCATGGCAACACCAAACTGGCCAT CATCCTCTACATATCCTTCAACCTGCTCCTGGAAACTTGATCGTTCAGAA TCTAACGGATATCTTATTCACGTTATGGACATTAAAGACCAAACTTATTC TTCTTATTGTTCCTCTAGCAAACAACAAATAACGATCAAAGGTAAGTTTC CAATACAAAACTCTGTTAAGTGTGTTTGGGACATCGAGGCATTTAAAACC AAACCTATTCTATTCTTATTGTCCCTCTAGTAAGCAACTTATAACGATCA AAGGTAAGTTTTTTGTTTTTCATAGAAATCTTTGTTAAGTGTGTTTGGAA CATCGAGGCAAATGTAAAATCAAACCTTTTCTTCGTTATTGTTCCTCTTA TGAACCACAAATAACGACCAAAGGTTAACTTTCTATACAAAACTATGTTA AGTGTACTAAATAAGAGATTAAACTTACGCATTTTTATCGTTATGGCGAC CAACGAATGACGATAAAATGTGAGCTAGTGAAATTGAGGTCCAGACCAAA ATATACCAAATATGGTAAAATGACAAATCTAATGAAATAAAATTTATTTA AAATCAGACCATCGAGTCTATCTTACCGCCATAAAATACGAGGACAGTTT AATAGTGGATACAATTCAAACTTCTTTTTTTTTAGACGAAGACAGTTATT CCTACGGGAAAGACATTTGCACCCGGGATAACGGGATTACTAACTATTAC AAACCTACTGTCAAAATTACCTACAAACGCGGGACTGATTGGAATAAGCG AGGCGTTGTCGTTGGATGGGTTGCTTTCAATAACCCTTATTACAGTAAGT AAACCCAAACAAAAAGATTTTAATATTTTCGTTTGTATGTCCTATCTTAG CCTGTACCAACCCCAGACCACTGACCTTTATATACCGTGGACCAAGTTTT TCAATCCCGGCCAAGCAAAATTCTTTGATCGGAGTTTTTTGAAAAGTGGT ACCCTAATGGCGGCACTACTCAATAGCGGTGTATATGCATCAAGAGCGCT AGATCTACTTTCCCTCGAAAACTTTTGATGATGTAGCGCCGTTAGATGTT AATTTTTAACACTGCAATGGCTTCTTTACGGATACCAATTCAAAAAAAAC TTCGATCAAAGATGGCGGATATAGCTTGGTCCAGGGATATATAAAGGTCA GTGCCCCAGATGCACATGGGCGATTTTCGCTTTTTGGTTGTCGTGTGTCG GTCTCTTACGGTTAGATAATTTTTTTTTCGCGCTAGTACCAGTCGAAAAA CAGGTGCGTGGGAGTGTTCTTTTGAAAGCCGCAAGAATTCATGGCACTGA GGTAATATCACTTTATTTAACGGGATTTGCTTGTTAAAAATAGAACACCA CTCCACTGCAGAAGAAACAAGAGACTGAGAATATATCTCAGTTACAGAAT GGTGCCTAACCGTTACAAACCGCACTTCGAAGTTGTTTTTTTTTACGAAA AAGAGGTTGGCAGAGACTACTAATTTTATTTTAGATATGTGTCTAAAATA AAATTAGTATAGTATAAAATGCCTAATATTGTAAAAGATTTATATTGAAT TGTAAAATTTAAGGTGCTTTCACGACCTGTCTTTTTACACATTTTTTATA AGAACGAACTATATAAGGCTTTGATGGCAAAAAATGTTAAGAACAGGTTA AGAACATTTTGATGCTTTGAGGACTCTCAAAACACTTTATTTCTTAGGAA AATGGACAAAAAATACTCCCAAAACGAGAAAAAAAAACATGTTAGTAACA CTTTTGGGCTTGAAACTCAAATGACACAATTAGAAATTTATGTTTGTTAC CAGTTCAGTACCATGCTGAGCTGCCTAAAAGCTCAGTCGTTATTGTCAGG GTTCGAAATACCGTTTTCCCGTTAAAAACCTTTGCTTAATCCCGGAATCC CGAAAATTGAAAAAAAATGATAACACCGTCACACCGGTTTATAGAGGTTC AAATACCGGCATAATGACAAAAAATAAGGCTAAATACCGTCACCGTCTAA TTTTAAAATACCGTTTTCCCGTCTATTTTTTCGTCAAATCCCATAATACC GTACTAAAAAAGAGCCAATCCCATCACTTTTACGGAAGTACAAACCCCCA TTCCCACTTAAAATATTAGTCATTATTTTTATACTATTATTAAAGTTACG AACATCCCAAGGCTTCAAAAAAATTTTGATGTTCTTTTTTTCATTCCAGC TAACTATGGATCTATCGGAGGGTATATTGCTGCCGGAATTCTTATTCCTT TGGTCCTTATTTGTATCATCGTGTGTGTTTGCTTGAAACAGAAGCGAGGC TATGTGTTCAGCCAAAGAGCCGCTTTTAATAACATGACACCACAAGGGAA CAACATGACTGTCGTCAACAACCAAACAGGTATTTCCATTGATTCTTTTT TATAACAAATAAAATAAAACTTAATCCTAATAAGCTCATCTTCTTGATTT CGGCATTCAAAATACAAAAAAGAGAGAGATGGTGAAATTTCTGAATATTT CGACTTCTTTATCGAGTCATTGTCAACACTGTCAAAATAGTCGAAATATT CATAAATTCCCTCTCTTTTTTGTATTTTGAATGTCGAAATCATTAATTCG GATTAAGTTTTCTTTTGCTATGAAGTGCCCTGGAGTTAGCAAGTATTTAC CTCGCCAAAAGCCGTGATTTTTTCCATTCCGTTTTTTGGCGAGTTACACT TTTGCACATTAACCATATTATTCATTTTATTTTTTGAATATCTTTTCCTT AGCAACGAATACAACTTCTCTTAATGAGGGAGCGAAGAATTATCCCGCCC AACAATATGTTCCACCACCCCAGCAAGGATATCCACCTCAACAACCAGCT TACCCACCACCCCAACAAGGTGCTTACCCACCCCAAGGTTATGCCCCGCC ACCTGGAGCTTATCCTCCACCAGGAGCATATCCACCGCCCATGCAAGGAT ATCCGCCCGTCTCTCAACAAGGATATGCTCAACCACCCTCCTACCAAGAA TCTGTACCAGCTCAACCACCTGCTCAATAAAATCGCTTAAAAGATCTAAT ATTGTCGGTACAGTCTATAGTTTTTACTATTTTTATTACATTTGTCAGCT AAGGGAACTCCTGCCTGCTCAGCTTCTTTTAGTAGAGAAAGTTGTTTATA TTGTGAACACAGTCTTCCAAGCTTGGAGGGTAAAAATAGTACGAAACAAT GTTTTTAATTGAAGAAGGGATTAAATATATATTATATATTATTATTATTA TTTTCTTATTTGAATTTTTGACTTTTTCTCAAAATGGCTACCGCGTCAAA TGCTCCTAATCTAGTACTTCACTGGTTTTAGATTTTGTAGAAATAGATTT GTAATTATCATGATTTTTTTATTTTAGATAATTTTGCATAATAAGAGTTT TATTTTATAAGAGTGATATAATATTAGATGGTTTACAATATTATAGGTTT GGTTTTTAAATAAGAGAGATATCGTTTGCTTACTCATCGATTTTAATTTA CAAGCTTTTTCACATTGGATTGACACGAATGTGGAGCAATATTGGTCAGA AAGAGGTAAAGAAAAACGTTATTTGCTTATATCAGCATAACATAACAATA GGCAGACATTGTCCTGATATGAAATAGGTGTCTGATATGAAACGGGAGCA CACTTATGTAAAAATAAAACCTAACATAATGATTTTTAAATTGCACACTT TTTCTATAAGAACAAAGTTACAAGAACACGAGGCTGAAAATATTGGTAAA AACCTAAGAATATCGTAAGAATATATATAAGCCAAAAAATTAAGAACATC CCAGCCTGAGTCAAAATTTACTGGTTTTTGTAAGAAAAAGCGTGTATAGC ATGAACATATAAAATTATAGGGACCAACTGAAACGCACAGATACAATTAT ACATTGTGCTTACAAATAATATATTATTATGTTTTATGTAAGAAAGACTT TTAAAGATTGTAATGTTATTATAATGATCCTATACACGCTTTCTTTATAA GAACATCCAAAATCCTCGAAGTCTTTGGATGTTCTTAGTTTCTTTGAGTT TTAAGCCTAAGAATGAATGTACTTATACGAGTCCTTATAAAAATGTTCTT AAATTTTCACCATTTTCTGAGTAATTTTTTCTGTATTTCCATTTAAAAAA TTAGATGTCTATAAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006964TCONS_00006964Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000072supercontigsc0000072:605995..613211 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.65 3.81 14.86 19.47 3.45 2.82 2.74 2.93 3.16 5.45 8.7 3.65 27.42 26.27 24.73 33.75 20.81 22.12 34.58 31.2 25.82 29.78 18.56 20.71 21.24 19.37 13.29 13.97 54.05 43.62