XLOC_003925 (gene) - C. hemisphaerica

Overview
NameXLOC_003925
Unique NameXLOC_003925
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000073:99831..102818+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003925 ID=XLOC_003925|Name=XLOC_003925|organism=Clytia hemisphaerica|type=gene|length=2988bp|location=Sequence derived from alignment at sc0000073:99831..102818+ (Clytia hemisphaerica)
CTGGTCTACACTTGAACAATCTTGATACATTGATCTATACTGCAAAAATG
AATTCTTTTCTCGTTTTCACTTTACTTGTTGTCaccatgatgacgtcatc
agttttcgGTCACGGTTACATGAGAAGTCCACCAGCCAGAAACAGCATGT
GGAGATTCGGCTTCCGGCAAAATGGAGCAAATTATAATGATAATCAACTG
TGGTGTGGAGGTATCCCTTTTGAATGAATTCCAtcgttttgcaatttttt
tatatataggGGTACTCTTACCCCTAGCGCACCCAAGATGAGTTTCAAAA
TACCTTTATAAGTGCATCAATGATAATCGGTCCCAATGAGGCCATTCCGC
TTTACGTCCATCAGGGGGGTGGATgaatatttccagggggtctaaaagag
tttttcatttttccaggcgGTTTTTTTTCAGCAgttaaaagactgatttt
agttcaactaccgtcactttaaggtatgaaaataaatttcataaagtttt
ttttagcaAGTTTGTcactttccagggggtatccacacaagAAATGCTTT
TTACGTGAAAAGGTTCGTCAACCCTCCCTACATGGAAATTTAATAGAATG
GTGTAAACGCCCTTAAGTAAAGTACTGACCATTCGGTGACCCTTACTGTA
CTGattgtcaaaacaaaaaaccgattttcgtaagctttgttttctttttc
aatgttATTAGGGTTTCAAATCCCCCTCCACTCGACGGTTGTTTCTCGAT
TTTATCGATGATATTTATTCCACTACAATCGCAATTTTCAGGCCGTTCAA
CACAAAGGAGAAACAAGGGTCGATGTGGCGTCTGTGGAGATCCTTTCGAT
GCAAAAATTCAACCTCACATGTAAGCACCTTTTTATGTTGTGGTTACATC
TTACCCCTGTTGATTGTCGAAAGAAACAtaggaattttttttctattcta
aTCATATTTTAGGAAACTTTTAATCACATTTATTTTTttcggcgagaact
aattttggcaaatttggcgAGTTTAGACAAATTCACCAAAGTTATCTATT
TTACTCACtcataaaattttcaagattttagctcctcgccaaaattagtt
attTTAATGTAGAAAGAAAGTATTGCAAGGTGGCTTTAGGAATACCATAA
CGAAAATCGCAAAATTGATTTCTACATTAAATAGAAAGAAGGAGTTTGAA
ATCGTCAATTCCCGACATTTACATTTTTCAGGGATGGAGGTCGTTTTGGA
AACCGCNTGAGTTCTACATTAAAAGAAAGAAGGAGTTTTAAATCGTCAAT
TCCCGACATTTACATTTTTCAGGGACGGAGGTCGTTTTGGAAACAGGATC
ATTGGCAAAACCTACAAAAGTGGAGAAGCTATTAAAATCAACGTCTTGTT
GACTGCAAGCCATTTGGGATACTTCGAATTCCGTATCGGAGATTTCAGCA
ACAGTGATACTTCTGGTGACAAAGAAGGAAAGTTGAAAGGAGTTCTCTTA
AAACAGGTGAACATATTTGGCCACAGTCTTTGAATataccttatcggagt
ttttgatttttctaaaaaagtgatgcattgagggattgtttcgagtgtat
tacaataggattccctcgaggaattcctagagagatttctattgtaatac
tctgtaaacaatcccacaatgcatcgcttttttagaaaaatcaaaaactc
cgataagatctattgtcTTCCAACATTACATCacgaacccaacagctgat
tggtttaaAGTGACGTATTGAATGATTTTACATCTTTTACAACAAATAGA
CTGTTTGATGTATGATGTGATGTTAGAAGAGATTGCATTGGTGAATTTTA
TGATTCCACACCCATTGCTACTTCTAACCAAAGGCTGCCTGTTTTATTGA
AAGGGCGGCTTCGGTACCACCCGTTTTCGCAATCaagtttaatttacttt
tatctttcaatctttttcgcGAATGTCTTAAACGCGGCTTGTCTGGTTTC
TTGAGAGAATCTTTATGTGCCATTCCTCTTTAAAAAACGCGCAGTCTCCT
TAAAAACTcacttttattgcaaaaaagaGAGAGCTATATCTCATAGAAAA
AAGTGTTTCGAACGAAAAAAAGTAACCTGAGGCACATGATATTGTCATAT
AATGATGAAAACAGCAAAAATGGGTATCCTAGAAATTACTTAACTTCCCC
TTTAAAAATAACATTGGTTTCAAAGCTCCGAAGAGGCTGGAATTGAAACT
CTTGGATTGGAAGTTAAGCCACTTACTTTAGTacaaagtttgtacgccta
aagtattttcCATCCAACAGCAAGATTCCTAAATTTCAAGGCTTCACATA
TTTTTTCTCAATAAGGGTTAAAGATTCTTCTCTAGCcacttcggggcttt
aaactcaattatAGAGACTTGTACTCTTATGTTCCAGATAAAATGGGGGT
TCGAAtaaattcgaaatttttataAACGGGGGaggcctaattgccggggg
gttggaaatgtACTTTTAAAAACCCGAAAATAAGGTAAATCAGgttattt
agagcaaaataaggggccttctctttgacagctgaaaatattcttaaaaa
tcatTAAGTTACTCTTAGGTAAACTTAACAAGCGgtggccgtttatttgg
aacctaagagtaaccgTGATCGTTTCATCATACAGGTTAGTGGATCAACG
AAATATTACATTCGCTCAGCTGGCGCAAGATCTCACAATATCCACTTGCA
ATTACCTACCAACTTGGCTTGTGAACGTTGTGTGATTCAATGGTGGTACA
AAACTGGCAACTCTTGGGGATGTGATGCTGAAGGCTGTGGTATGGGCCAT
GGATTTCAAGAAACGTTCGTCAACTGTGCTGACGTTCGCGTTGAATAAGA
AGCCGTTCCTTTGGTCGTCAAAATTTTCGTCTGGTATTGTTATAATTTTG
GTGATAGTAATTCTTAAAAGTAATTCTTTAAGAAAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007011TCONS_00007011Clytia hemisphaericatranscript
TCONS_00007012TCONS_00007012Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073supercontigsc0000073:99831..102818 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06	0.39	0.37	0.07	0	0	0.21	0.15	0.24	0.27	0	0.06	57.86	89.7	0	0.31	15.97	14.11	1195.57	1057.39	140.52	138.74	570.83	529.32	1139.31	1287.55	0	0.25	0.17	0.54