XLOC_004022 (gene) - C. hemisphaerica

Overview
NameXLOC_004022
Unique NameXLOC_004022
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000074:62675..73013-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004022 ID=XLOC_004022|Name=XLOC_004022|organism=Clytia hemisphaerica|type=gene|length=10339bp|location=Sequence derived from alignment at sc0000074:62675..73013- (Clytia hemisphaerica)
CGAGGAGGAAGAACGTGGTCCCCATGAAACAGCAGACGCATCAACTGTTG
ACCACATGTTACCAAAAGGATATGTCGGTGACGAGCACCATAGATTAGAC
GATCGTATCCATCACGAAGAATCTGAAATGCAACATCTCTTTGATCACGA
TGTTAAACATCATGATCTCGGTAAACACGAAGATAGAGCTGAGGATGACT
TCATTGATAAAATGCAAAAGTTAACAGAAACTCCTTGGGGATTGCAAAAG
AAATCGAAGACAATGAATACGACTTTGTCTCTAACGAATACTACGACTCA
TGATCCTGTACCAGCTGAGAGAAGAACCAACCTACTAAGGACGGTACAAG
ATATTCCAAAATTGCTTTTAGGAAAACTATCATCAACTAAATTGAAAAAT
GACACTGGTGATAGAAGAACACTTGCAGATAGGAAACAAACCATTGATAA
TTCTTTAGTTAGTCAACCTGCTCCAACAAAAGGAGTTCTAAATGATTTTG
TTACAAATTCCATGAACCAACAAAAAGGATTTTATGATAATTCACTATTA
GCTGATGAAAATGGACGAAAGAATTCAGACTTGTCAGGGTCTGATATATC
ACTATTGAAATCGTCTTTCAATCCAGAAGGGCAAGAAAATCAGAAAGGGA
ACCATATCTCTCTGCCACATCTAAATAGCACCTTAGAACCTGGCTTCGGT
CAAATCAATCACCAGAACAGAAGCTTGGATGATAGCCCCGAGGATATTGG
TAATCCAAATGACCAAACAGTTACCCATATATCACCTGAAGATGACGAAG
ATCCGATATCATTGACCAATGAAAAAGAAGATAAAGATAGTCAAGTAAAC
CATTATATGCATGACGTCAAAATGGAAGGTGAAGATCCAATAGCAGATGA
AAATTATTATGGTCATAAAGACTTTGAACATCATGAAACTGAGAACCATG
AACGAGAGCATCAACAACACAATGTTCATATGAGTCAACATGAATTTGAT
GTTAATACTGAAGCACATGATCATTACCATGATACAAACGAAGGTAAAGA
GCATCATAAACATAATCATGGTCGTCATCACGAGCATGCGCACAACGAGA
AAAACCACAATGAAGATGCTCCTAGCGACCAATCTGATTATGACAGCTTA
GAACAGGTACCATTCGCATCAAATAGAGATAGCGGTAAGAAACATGGCAT
CCCTGATTTGGTTCAAAGTGTATTAAGCAAAGATGCAAGTTCAGTCAAAT
TCCATGGCCTCAATGCTGACCCTTTTTCCAGCGCACAGAATAAACAGAAT
TTCAAGCAGTCACTCAATGCTCAACAAGGAGAACAAAACAAACTGCAGTT
AGATGTTACCAGTAATGAATTCGGTGANAAGGAGAACAAAACAAACTGCA
GTTAGATGTTACCAGTAATGATTTCGGTGAGCTATCAACACCATCTGAAG
AAAGTTCAAGGAATCAAGAACAAACATCTGAAGCTACCAGACATGATGAT
ATCCATGACTACCATCATGAAAAAGGAAAGCATGCTCATTATGGTTTGAA
TGGTCAATTACTTCACTTCGACTCTTATAATGATCATGATAGATTTGATG
AAAATGAAAATGCAGATTATCATGAAGAAGATCATCGACATAAAGAAAGT
AAGTGTTCTAATACTACACCATTTAACGAGCGAAGTTAAGCAAAAAGTCA
TTTTCAACATGAAACCGATACCCCAAAACAATAAATGGAATAACTGAAAC
ATTTAGACCTTGCAAATTTGAAATTATAGACAGCCTCTTTTTTAAATCAC
AGAAGGAGGACCTTGTTACTTGTTTTTCAAGAGGGCAACTTTTCAAGCTC
AAGTTGGATTTAAAAGGAAGAATTTTCGCAAAGGTCTTTTTTTCAATTGG
GATGTGCCAACAGGCATTGGTATGTTCTGATAATTCACTTCATGGTCCGT
TATCCCTTTTAAGTACATGACCTTTTAATTGATTGGTTGCATAATTAAAT
TCGCTGAAAAACCTCGACCATTCATTTCTAGGGATTCTAGGAAAGGTTGA
TATAACTTTCGATTTATAACTTTTTAATGATTTCAATTTAGTTGACCATT
ATGGTAACAAGAAAGCAGACGAAGCTGCAATGATAGCACATGGAGACGGT
CATCAGGGGATGTTTGGACATGAAGGAAAAAGAAAACACTCTGGAGAGCA
CCATCCAGAAGGTGAGCACCATTACAAAGACACTTACAAAGACACTTACA
AAGATAATTACAATGACCATTACAATGACCATTACAGTGATAATTACAGT
GATAATTACCAAGACACCTACAAAGATACTTACAAACATCCTGAGAAAAG
TGCTCACCACCATGGCGAATCTTCATATAAACATTTGAAACATCATCCTA
AAGAAGATAATACCTGGTTCAAAGACCATGAGCATAAGGAGGACTTCAAA
CATTCCAGATTCAAAGATGGAGAACACGAAGATGATGGAATCCACACTAA
AGGGTAATTTTTATATTCCGATCTGTTTGAAGCTGGGTCTGACCTTAAAT
CAATGATTTTTTTACAGGGAAAAATATTTTTAATTGAGAATTCAAAGAAA
CGATGGAAAAAATCGATAGGATATTTCAGGATCCCAGAGCTCAGAATGAG
ATAAGGTAGTGTTCCAAATCCTAGAGAATTTTAATTTAGACTTATTTCAA
GTCAAACATTATTTTCTTTGTCATATAAAGTTTTTGCATGAACCTTGCAT
TTGATTTGTTCTTCAGGTATATTGGTAAACACAAGGAGGAGCAAGATGCT
GAAAGTAGAGATACCTTAAGCACTGGTCATCACCATGAACCAATACTGGA
AAGTCACAATCACGACACGGAAAATGGAAACAGTCATCGAGGGGGTAGCG
AAAGTGAAAGCTTGCTTAACGGTTGGGTTGGATATACTAAAGATAATCCA
AACCCTACTTATGATGCAAGATTCATTGATTCATTGATACCAAAGAAACT
GGTGAATCTAGAAAATGCACGTATAGGTCATAAGGTTGATCGGGAGACAA
AAGAAATTTACAACCTTTTTCACGATATTAAGAAACACAATGTTAGAGAA
CCAGAACAAAGATTAATTGGTGAACTTTCAAGGTTGATCTCTTCTAAATG
GGGTTTGAATGGAAATCTTGGATATGAAGTCCCTTATCCACATATACCGA
AAGGATTAACTCATAAATATCGTAAAATAGTTGTGAACCTTAATACTGAA
GGTTATCCAGGGGGAGCTGTAGAGGAACCACCCTCGCCACAGAAACTACA
ACTTCATGATAATCATCTACATCATCATCACATCCACCATCATCACCATA
TCGATGATGAAGACGACGAAACCGGATCTAGGAGAACCAATTTACCTTCA
GATGCCCATAGTGAGACAAATACAAAAACCTTCGTTAATAAATCTGGAGA
TACTACAGTAGTACCTGGTAATTCCTTTTTAGATGACATGGCTTCTTGGG
AAATGCCAATAACCAAAGAATCCTTTGCGAGTCAAAAGGAGTTTGAAAAC
TTTGCTACAGCTCTGAAAGAAGATTATGATCATATCAAAAATACTGCATC
TACAGTAAAGAGAGAGACCATTTCAACAAGGAAATCAAGCTTGAGCAAAG
CAGGTAAGCTCTATAAATCAAAATTCATCTTTAAATATATCTCTGTCTCG
GTTATCAGGTTAGAATTCTAAGCAATGAGGATAAATGAAGGAGATAAATG
AATGGAGATTTCCACTTCGATTAGATTAGCCATAAGTGTATGACAAACTA
ATCTAGAAAATAAAAACATCAGCTCAGAACTGTAGTAAGGCTTCTAGAAA
CTGGTATATTCTTACATTGGAGTGCTCTTCTGGTTTTCTCTAGCGAAGAA
GGAGATCGTCAACAGGGTTATGGGTTGTATGCATAGATGTAAAAATGCAT
AAAGTCTACAGATTATTGATTTCCAGGTTCAGCGTCAATATCGACATTTG
GATCTCAGAAGGACAATTTTCAAGAAAGCCCAACATTTTTAAAGAAGATG
TTTCAAAGCAGTGAGATAAGTATAAATGAGGGTGAACGGGGACTTGAAAA
AGATTCAAGTCATAACTTGATGGAAACAGATGATGATGACGAAGCAACTC
GGCGTGAAGATATTAATAATGAAGACTCTAACGAGGAAAGAGATAACAAT
GATAGCCAATCAGATGGAGAAAGGAGAATTCCATCTGAACGTAACAANTA
ACGAGGAAAGAGATAACAATGATAGCCAATCAGATGGAGAAAGGAGAATT
CCATCTGAACGTGACAATGAAGAACAGCTTAACAGTTCAAGAAATGACGA
TAGCGATAATGCAGATACTAAGGGTCTGTCTCAAGGCACAGAAGAATCTT
CAAGAAGAGATACTCAAAACGAAGGTGAAAATGACAATGCCTTGGAAAAT
GATAACCAGAGGAACTCAGATAATGAAAGACCGAATATTGACGACAACGA
AGGAACTGAATCACCAGAAACAAGATCAAATAACTCAAGAGAAGAAGACG
ATGAAAACCCAAACAATAAAATCAATGATGAAACTGAGTCACCAGAAATA
AGGTCCAACGATTCAAAAGAAGATACTGATGACACAGAAGGTGATACAGC
AGAAACAAGGGAAGCGAAGAACAACGAGCATGAAGAGTTTAATAATCATG
GCGAACATCCATTTGGTACTGTTGGTCATCATAAGATGCCAAAAGCACAA
AAGATTCTTGATAAAATGCTCCACGAAGACAAATTCCTTGACGGCAGCTC
AATTCGTGAGTTGACACATAACATCCCTGCTTAAGCTCCCCCAATGGAGT
TTCAAACGTCACCCTAAAGATTTGTAAAATTTCCAAATTTGACCAGAAAT
AAGAAATATTTTCCCACTGGGACTGATTTGACAAGGGTACTGATACAGAT
GTGTTATGTTACAAACATTTTAAATAACCGATAGAGCTGTGAACCCCTTG
ATTTGTTCTTGAAAATATTTTCGGCTATCACAAACTGAGTTTCTCTAAGT
AGCCTGGGTCCAGCTTAAAATTACCTTATTTGCATTTCAGAGATTAAAAT
TTCTGACCCCTGCTTTTATTCGGACCCCCTACTATTCGGAACCTTAGAGT
AATACAATTCTGCAAATATGAAATAGAATGAAAGGGAAAAGATCACTCAA
AACTGTTACATTGATCTTTCATTCTTTAGATAAACACATGAACAAATTAG
CAAATTTTCTTCACAACGGTGGTAAAGAGACAACATTATACAAAGTTCAT
GGTTTAGCTGATCAAAATCTGGCTGGGTATGACATTACGAAAACTGGAAA
CGGAATTCATGGAATAGCTGGGCATGGTAAAGTCCTAAATCCTAGTCTAA
ACTGCCGACTTTCTGAAAGTTGATCCTCCAATTACTTGGCTTCAAACTGA
CATACATGCCTGTATCATACAACCATCTGGTTAACTATGTTGACATTTAA
TGAAAATTTAAGTAACATTTTTCAACAGATGGTCACTATTCCTAGAAACA
AGGTTTTATAGATAAAGTCTATCACGCAAGGTTGGTGTTGAAAGAACACT
GTGTCTCGTCGATTGCCTTTATTACAGGGCAAACTACCGAATAAATGCCT
CTTTATAGTTTCTTTTATCAGAAATCCATTTCAATCTTCCAATAGGTGGT
CACCATTCAAAAGAAAGTGGATTAGATGAGATGGATGAACACAAGATGAT
CAGTGGACATTACCACGAGTTATTGGAAAACGATCCACACGGTTATGAGA
ACTCACATGGTACGCTAGACGATAAGTTTCACTACTGGATGCAAAGGGCA
CGTAATTATCACAAAATACCACGTGTTGGCTTCTCACTTCATCATTTAAA
AGGTCCAGAAATCGGATTCACTAAAAACGAGAATACAAAAAACGGGTATG
GTGGAGATCACAATTTCGGACATCGTCATTTAAATAGTTATGGTGAACAG
TTTGCGGGTGGTGATACGTGGATGGGTCATCAAACAGGTTTGGATGGATA
CCATGATAGCAGTAGTGCTCATCAAGGTGGAGGAGGAGGTGCAGGTGCAG
CTTTGGGGTATTATGGTGATGCAGGTGAAGGGGATGACAGCCACAGTATT
GCGACTAATGAAGGTGAGCCTACATTTGTTTTTCGTTCTTATTCAGTTCT
GTTCAGAGTGTAAAGGCAACTTAGATCCTCGCTATCTCAAAAATATTTTA
AAGTATCTGCTATAATTTGAACCAAAAATTTGTGATTTGTGATTTCTCTT
TACTTTTCGCTCAGGCATACTTATTACCTCAAAATTAAACACCCAAAGAT
TTCTAACTTCAATTTACTTATAACATTAGCAACATTAGCTATCAAGTAAA
TTATCAGGTAATCACGTTTCGATCTTTATGATACGCGTCTTTATGGTGAA
TGAATATCTTTAAGGGCCCCAAAAGGGTCCATTATTGATTTTTCGACAAT
TCATATCAGAAAAAGTCGAATTTCACTCACCGGAACGTTCGTTGTTATTT
CCCTTATATAAGGTCATCACGCACCGATCTATCTTTATGGTACACATGGT
CACGGTGATCATTATATCCACCATCACGATAACGATCACGGTCACCACGG
ATTGGCTGAAACATTACCATTAGACGATCATCCAGCACATCATCTCTTCA
AACAATTCGCTAATGGACATTCGTTGAGTCAGGATGACTATGAACACAGC
TTGGATGATCATATCGCTCACCATATGATGCACGAAGGTTCCTTGCTGTT
CTTTTTTTATTTCCAGTCGTGTTTTTTTACCTCTATCAGCTGCTAAAGAG
TGATGCCTGCTAGACACATACTTTTTTTGTAGCTTGCTAAGGCTCTAGGG
CTCAGATTAATTTGCCAATTCTTTTTTACTATCTTGTAAAATAAAAGCTT
TATATGTCTAACCATGACAGACGATAGCCTGACCTAATAATCATAAATAT
GGTATAATGTCAGAGATAGTCAAATGAAGTTTTTTAGAAAATTAGCTAGA
ATGCAAAGCAACCCGAGGGCTAACCCAAAATTGGTGTTACTTATAAAAAA
TGTCCACAACGCTACATCAAAATCATTATGGAAAGCGCTTCATTATTATT
ATTATTATTATTTTGATCATTTAGGACATCACGGTCACGATTTGGAAGGT
CATCACGGTCACAATTTGGAAGGGCATCACGGTCACCATTATGATGATTA
TGCACATCCTTATCATGATCACCACCATCAAGCTATCCATGAGTTAGAAG
ACACTCTAGATCATCGTCTCGCCAATCCACTTGATTATCACATTCCACAC
TTTCCGAGTAGACACAACAGTGCGCATATGAATCATTTCTTCAGACATGA
AGTAGATCGAATTGCGCAACATGTCAATGAATTTCCGTTGATTTCCGACA
AACAAAGCGTTCACCCAAGTGTATTCCATGATCAATTAAATGTCTTGCCA
ACTGTCAATGATGTTTTAACGTATGGTGGTAGATTGATGCACGCGGGAGG
GCGTTATGCAGCCGGTGGTGCCCTCATTGGGGCGGGTACTGTAGGATATG
GAGCTGTAGGCAGGCCAGCTATTGGTATTGGTCTAGCAGCAGGTGGAGCC
GCAGGACCAGGTGCCATAATGGGTGGTAAAGAACCACCTTTACAAGCTTT
GATGTCAAAATCTACTTCTCAAGGATTCTTTGGTGAAAGCCATAGCGATC
ATCATCATTTTGATATGTGTCATGATCTTCATGTACCATCCATCCATCTC
ATGGAACGTTGTGGTGATATTCACCATTTTATACCACATTTCGAAGGAGA
TGGGTGTCATCTTGGACATGGAATTGGAGGTATGATATTTTGAATTAAGA
TCTGTTGAGGATAAAACTTCACAATATTATAAAAAGCCACCTCTGTTCTC
TAAGTGCCTGTAATCTGAATTTTAAAGGGACCCCTCGCATGTTTGTGATC
TTTAGGAAATCAAACTATATTGGTCCAAAAACCCCCAACAACATATTCAA
AGAAAATAAAACTTACGGCTAGTTCCTGTAGATATATCGAAAGATTGCTC
TGAAAACAGTATGGCGTCTCCGTCTGACTGAAACCAACACAACCGGGGCT
CATTGGGAGTTCTGAAGCCGATACCGATTCTCCATAAACCCGCAACTCGA
CTCCAAGCAAATGGTTTTTCTTAGGAGAAGAGCGCAGATTCTAGACTGTT
CGAACCAGAGCTGGCCTCAACACTCCTACTGTGATTTTCTGGCGCATTTG
AGTCGACAACTTGGTGCGACAAGAGCGCGAGAAAATTCGAAGGCCTTCAG
AAGCCAGTTGAAATTTCTGAAAGTTGAGTGAACATCAAAGTTTATAATAA
GAAAGAGTTTTGCATGCTAATACTTTGGGAAGTTGCTTTTCATATGCTTA
TGAAGTATTTATGAACAGCCAAATATTTCAAGTTGTTATGATATTATTAT
TTCTATTAGGTCCATGCGGACATGGAGGAGCCTTAGATGTCAGTTTTAGT
GGAGGATTTCATGGTGGATTTGCAGGTAATGGTGGATTTGCGGGTCATGG
TGGATTTGCGGGTCATATCGCCGCTTTTGAAGAGGAACACCACGAAGTTG
AGGCGCCTCCACAGCCGCAAATTAACCCCAAGGTATTATCAAACTTGATT
TTGCATTTTCAGGATTTAGAATTAATTAAACAGCTTAGTAAAAAGAGAGT
TAAGTCTTTGCAACATTTTGTACTTCTTTCTACTTCTTGTAGGCCTTGCA
AGAATATTATGTACTCTAGGGTACCTAATAGCAGGGGGGTTTAGAATAAG
CAGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGG
GGGGGGGAGGGGATTGGAATAAAAATGTCCTGGGTGGAAAATGTTCGAAA
AGGAGGCTAATACAGCAGAATTAGGGCAATAGAGGGAACTTTCAAAATTA
TTTTGAAAGGTTGGAATAAGAACGTCTTGGGTGGAAAATTTATTAGCAGG
GCTCTCTGGCTATTAGTCCGAGAGTAGGCCCTTAACCCTCTACATCTAAG
GAATATAGTTTTAGAATATAGCTGTGGAAATGGCTCAGCTATCCATGAAG
TGTTCTGCTCCGAGTGACCTTACTTCATACATCAATGTTATTTTTTTTTA
CATTAGGTCTTCCAGTATCTGACATCAGAGGATCGTGGTGAAGGCATCAA
AGCAAGTTTGATCAAAGATAAGAGTAAACCAGCACCTTATGTCGATATCC
TGACCTCAGAATCAGCGTCACCAGGAGCTGCTCCAACCAAAGTACCAGCA
GATTCCCCACCAGCTATTGGCCCTGATCCAAAACCTTTGATCATCAAAAC
ACCTAAACTACCACCAGAGGATTCTGCACCTGGGATAGCTCCTGATCCTA
AGCCAAAGATTGATCCTATTGTTCCTGGTGGTGGAGGTGGTGGAGGTGAT
AAAGGTGGTGGCGGGGGCGGTAAACCACCTGCCAAAGGTAAACCGAATCC
AGCCGAACGAGTCACTTCAGACACAAAACCGAAATGCAAAAGAGAACTTT
TAAATATGTGTCTTAAATTGAGTCCCAAGAATCCCATTCAAAATAAATTG
TTGATGATGCTAGGTGATAAACAATCTAATCAAAATAACTTGCTGATGTC
ATTGACTGGGAAGAGTCCAGTACAAAATAAAGTGTTAATGGCGCTAGCTG
GTAAGAATCCTATTCAGAATGCGCCGCTGATGGCTCTAACAGGGAAGATT
CCCTCCAAAAATAAACTCTTAATGGCTTTGACGAAGATGAACGGTCTGAA
GTTTAAAAGAAAGTAGTTACGAATTGATTGTATTAGAGTTTCTTCTTTTA
TCTCAAATTTGAAAAATGATTTTTCGATAATACCTTGAATCATGGAGGTA
TAAAGAAAGACAGGAGAAGTATGCTATTGTAACCAAGCTCGCCCTACGAT
TAAAAAAGTTACGATGTATGCATGCTCATAATCTCATAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007169TCONS_00007169Clytia hemisphaericatranscript
TCONS_00007168TCONS_00007168Clytia hemisphaericatranscript
TCONS_00007167TCONS_00007167Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000074supercontigsc0000074:62675..73013 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.01	0.02	0	0.09	0.11	1.4	1.63	0.47	0.63	0.87	0.47	3.57	3.37	1.89	4.79	2.4	2.42	0.13	0.21	2.04	1.78	1.22	1.59	8.75	10.14	0.38	0.28	0.2	0.18