XLOC_004156 (gene) - C. hemisphaerica

Overview
NameXLOC_004156
Unique NameXLOC_004156
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000076:718216..722069+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004156 ID=XLOC_004156|Name=XLOC_004156|organism=Clytia hemisphaerica|type=gene|length=3854bp|location=Sequence derived from alignment at sc0000076:718216..722069+ (Clytia hemisphaerica)
GCAATCCAAGGTAATATATGTTTGAGTTCGAAATAGATAGTCAACTGTTT
ATATATTAAGTCATTACTATTTTCATGCAAGGAAAATTTGAACATCCTGC
TTACAGAATCTGGTGCGAACCAAATCTCCAAAACTTAACTTTCAGGCCCG
TAGCAACCGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggggggggggggtgcac
aaGGGCATTTTCCCcccaaagatttttccaaaagttagtagctttgaaaa
atcttgtattaatggcttcattttgagcataattttttaattagatgcGT
TTTCcagcaatctagacaccttaaattgcgaatttttttctctcggATCA
AACCATGGCTTACCCTCGGTTTATATTTCTCACTTTGccccctcaaaatg
aaaatgcttcctacgggcCTGACTCTTAAAGAGATTTTGGCAGATAACGT
TTATACTATCTGTTTCATCCATGAATTGATAGCCCTTAATAGGTGATATA
tacagttttttgaaatataactttatgAATTTGCTCTACGAAGAGTATCG
AGCACTCTCTGCTTTAATGTTTAAAGGTGATTTATTTGTCATCTTTTAGG
AACTGTCGCAACAATGACCAAAGAATATCGTGCCTTTCTATATGAGATTG
TCACGCCCATCTTGGCGGCTGGGATAGTGGTCCTAAACATTTTAGAAATG
TTTCTCATTCGAAAGCAAAAAGGACGAAAAGGTAAgttataaaaatgttt
tataaTAGTCCAAATGTTGTGACAAAACTTAAAAGGGTTTTTGGTGAGAA
GATAGTAGGCGCTGAACTTTATCAACCAttgaccaagctatatccaccat
ctttgatcagAGGTTTTAGAATGGTAACACCACTTAAGTTAGTGAGTCTC
ATTATCTGGTGGCTGTCAGTGGATCCGGAAGTGAGGGAGTCCTTTACTAT
TTGCAATAGACCTGGGATATTGAATACTGAGGTGGAGCACCACACCTAca
ctcagctcccagtaacttaccgacCAGATAAGACTAAtttgttgcagatt
atttcaaggtattctagttatgtatatacagtacattttgggggtcatat
tgaatatttctgacattacttctttatgattctacaaaagggagtNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNATAAGACTAATCAATCTAAAGCTACTAATCC
GCTATGAACGATAATTTGACGTATTCTTGATACGATATTGATTCAATTTT
TAACTTATTCTTTTGAAGGTGTTGGAAGTGTTTACATCGTCAATCTCTGT
ACATCCGATATTTTTGTCGGTATTGCAATGATCATACTCAAAATCATGAC
ACAATTCCAAAAAACAACACTCAAAGATGATGAAATCGCAAAGGAGTTCT
ACAACATTATCCGATATTGCGTAATCCGAATTTCACTCTTCGTCTCCGTT
TTCAACCTATCCGCTTTAACCATTGACCGGCTTTTTGCCATCAAATTTCC
ATTTANATCGCAAAGGAGTTCTACAACATCATCCGATATTGCGTAATCCG
AATTTCACTCTTCGTCTCCGTTTTCAACCTATCCGCTTTAACCATTGACC
GGCTTTTTGCCATCAAATTTCCATTTATCCACCGGAAACAAGGGAAGAAA
TTCGCATTCAAAATCTGTATCGGCGTCTGGGCTCTTAGCGTCGTTTTATG
TAGTATCGTGTATTGCGTCACACGGTTTTATCTTAACAACATCGGCCGTT
ACAACAATTTGGTTTTCCCGATCGCAACATATTCAGCTTCAATCATCTTT
ATCATTTCATACACAATAATTTTCATTGAGATGCGAAAGAGCTCCAAGAA
TGTGGGGGCTGGGTCGAGGAAGGGAACAAAAGCTGCATCGGAGCAGGATA
AAGCAGAGGTAACAACtgacttttttatttaactGTTCGTCTCCGACACG
GGAAAAACAGGAAGATTCTTCTTGAGAAATTTTCTGAAATGGGCAAATGC
ATCTTCATGAATGTTTTCGTACTAATTGTTGTGAGGTTCTTTCCCCTCTG
TTTAAATAGCTTGACATTCACGCTTAAATGTTTTCGCTAATCATCCTACA
TCTTAGATTCTTCTCAAAGAGGCAAAAAATTACTTATTTAAAATTGTTAT
TTAGTACCGTTTCCTGAAACTGGCTATCAAGACTGTCGCCGTCTTCATGA
TCTGCTGGATTCCTTTCTCAACCTGTAGTCTACACATGGCCATCACTGGC
ACGTGTGGCGGGCGAAGCGTCGAATATTCTCTCTTCACACTGGCCTACAT
GAATTCTGTGATCAATCCATTCATCTATTTGACGCATGCACAGAAAGCGA
TTTCCCAAAAGATGAacaaaatgattcaatttttcattccaAAGAAAGAA
GAAACGATTGAAAAGAATTTGAGTAGTGCTGTTACTAAGGATACCACGGT
TGCTATGGCTACAGGAAATGAGGCTGCTTAAACATCATTGAATGATAACA
TGAAATGGTCTGGGTCAGTAATAAGAACATATCATCTCCCTGAATATAGT
GACCGCTCCTTCTCAAAAGATCTGCAAACAGCCTTGCACGTTACATGAAA
AACTTAGTCTCAAAAACAGAATCCTTATAGGACAATGCAGTTTCCAAAAT
GTTCACTTATCTCGCAAATAACATTCAAATTTTCCTAGCTCGAACCGAAT
TTAGTATATTTTCAACTTCCTTTATGTACAATCAAGGTCGAAAGGTTCCA
TGAAATATCTAAACAAGCTTTTAAAATCCATATTTATCTAAACtccaatg
ttgtttctattaATTGCTTGTGAGCTTTACTGCAAATTCTATAGACTTGA
GGGAAAATTCAAAGATCCAacttcaaaatgtttaaaaagaaaGCACGATG
GGCAAGATTTGATGAGGATGCTCAACTTCATTGAGCTTTAAATGACTGTG
TACTTATATagcttttaatttaatttctaaTTTCATTTGGTGTAAATTAG
TATTTATCATGTAGCGAAGTTACCGAACGATAGAACCATAGCATAaagct
ttcttatactatgatagaactttaacacccctgtgtcacagacccgctgg
gaccccagtccaacaggaaaatttggcaaaaatttcgtccccggttgGAA
AATACTCagcaatttcagccccactgggaaattgactttgattttatccc
cattcgaaattcaatgtttaaaaattgccctccaaactggattttttaac
cttggaacaatagaatttttatctccATAGGAATTTAAATAGGAGTtatt
atccccactgaggaaaaaagttctaccggggctgtgagacaggggtgtac
tttAGTTTGAAGCCGGGAGTTCGAATGACTTGGAAAACTCCATACAACCA
TACTTtcatttgaactttttgaaagaggttttgcgagaaaaaaaagacat
tttagTCAGTTTGGAAACAGTAAGCTCTAACAAAAACTGCTTGAAAGTGT
AAACGAGATAATACcattaaaagattttcctatttttcacgGAAAAATCC
TCCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007388TCONS_00007388Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000076supercontigsc0000076:718216..722069 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.08	0.09	0.2	0.11	0.18	0.16	1.58	1.71	6.25	3.28	0.5	6.49	0.03	0.07	0.03	0.05	0.78	0.84	0.12	0.11	3.89	5.63	0.49	0.5	0.87	0.99	0.03	0.06	0.06	0.02