XLOC_004268 (gene) - C. hemisphaerica

Overview
NameXLOC_004268
Unique NameXLOC_004268
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000078:74630..80908+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004268 ID=XLOC_004268|Name=XLOC_004268|organism=Clytia hemisphaerica|type=gene|length=6279bp|location=Sequence derived from alignment at sc0000078:74630..80908+ (Clytia hemisphaerica)
NGTCGAAGGGACGAATGACGTCCataaatttcttcaattttcaggtaCCT
TTCAGATTTTCTTACATTAATCTAACTTTTATGGAATACATCAGGACCTG
GAAAGTTATTCAATGATGAGTCTACCTAGATATGCTATTATTTTGAATCA
AAATGCCAATGAGGAGGACGGTGGTGGAGCAGGACTAGCAAATAGTGCAA
ATTCTGTTGCTGCTGGTAGCAGCAGGAAGACAAATGTTGATGATGTTACT
TTCTTTCAAGCTCTGTCACAACTTGATGCACGTGACCCCACTATTTTACA
AGAGTTCATGGACGTTTACAGATATGTAAAAGTGAAAATCTCTGGAATTA
GTGATTGCATAAGTTTCCATGAAAAAACTGAGGATTCTCCAGATTTTGAG
GAATTTTCCGTTGATTTATGGAAAGAATTTTATATTCAAGAGGGTATCAT
ACAAATTGGTGTTTTAGAAGATAAAGAACCAACTGAGGTATTTgttatat
atgtgaagaaattcaaagaatttctgtccaactatcttctttcaggagat
ttgggtggcagagcagcatatgcatttcgtccttattaggactcgtcagc
actgcatactgcaccctggctaggcagatcgaatagaccttttttcaaag
aggacgtcctattgaataattatgtagtccagccataaaaacaatgatag
agccatgcataattactgtttcatgcatattgtaataattatgcatggtt
ttatcattgtttttctgcttgactacataattattcaacagggtggcctc
tttgaaaaaaggtctattgcctagcatctcacgccataaaactaaaggac
cctgccaacgcaccggactgtccggtgtatttgtccggtggcaaaagtat
cctttcgctacaccggacacaataagtccggtgtcagtccggtgttgtat
acagggaattttggacgccggacatttacgaaacaaaaaattaagaaaca
ccagacgcaccggactggtcatgtccggtgttttgattgccCGGTGGGAA
AAagtatccttctccgacaccggacatccgatttccttaagtccggtgta
gaaattgtccggtggtaaaaaaaattctcattttacaccggactttcgcg
tgtccggtgttcgttaagtccggtgcgtcggcagggtcctaaaACTAATT
GTGGCGCAGACTGAAAGAAGTATATTATGAAAAagtatagtatgaaaata
aaatgttttttcctgtCAGACCTACAGACAACAAAGAGTGGccaaattct
ttttcctcttagagagacgatgttacaataatgaaagggtaattagtcct
ctctgggtccctctgtctttatcctggcttgggacaggctgactgtcatt
taagacagccaggcgacattaccccagcggcctgtacaagatgacaacaa
actccaggtagactgacaggagaagaaaacaaaaaatgtatatatatata
tcaagTGGATGGGGCTGGGGGAAGGGGGAGTCTATGGGGGTTCAGTTCAG
TTACAGCAGTTACTGTAGTAggagggttagggttggagcttgaGAGTCGC
AATATAAGGCTGaagaaggccttcttaggggcccTATACCCTGAGAGTTA
ATCCTAGATGAATAGATTATATATTTATCCTTCTTATCCTAAATATATGT
ACAAACTACAAGTTGAGGTGGAATATGAACACGACCCTGCTGGCGCACCG
GACAGTCCAACAAAATTGACAAACATAAAAGACCTGGatgtttttaagaa
agaaatggaTAAAATATCAATTAGCGATTTTTAATCctattaaaatattc
aaaattttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNAAATTTAGGCtacattcttaatattt
ttcattttattaatcatattttttgttacattggcGAGAATAACTTTGTA
TAAAGTTTTTGCTAATCAAATAATAGAAGTCCAGTGTGTCTGTCCGGTAC
CAGAAAAGTATCCCTCAGCCTCACTGCACCCACCGGACAGTCCAGTGTGT
TTGTCCGGTGCCAAAAAAATATCCCTCAGCCCAAAAGTATCCCTCTGGTG
TTAATTTTTCCACAAACTTCTTGACACTAGACAAAGTTTGTTACTTATGG
TTACTTTTGGTTGTCTTCGAGCATATAGCTCTGGCAAGAACCTTTTGATC
CACACCACAATCTTCGTTAAATCCACATTTTGGGGTTCATTGGGAATTGT
TTTGAGGTGCTTATCCAGTGCAGTTTTGAATTTAGGTGAATTGCAGAAAA
ATCATACAATGTCCCGTCCGCAACAAAAGCACCCTTTATGCTTACAAGTC
AAGATCTGGGAACTAGagcagttaggaacatttggcgagtttctgtacgc
ggccgcaatcaaaaaaatcataaccacactcataaaaaaattaagtttgc
gtctttttttactgttttttgcctagacgatatagcaaacatagtaagta
taagcatcGTTTTTCCTTTATAATTGGATGTAAAAAATTTTTGCGTCGGT
AGAAATTTCTCCAACTTgcaacaatgatagaacacacctatttgaaaaaa
attaaccagcgcattttttatctttctacttcttcatcttcaatgaagct
ctcaaagtcaaatagaattaagcacataagatattcttataattgagAAA
TGTCATTCGCGCTTTCGCTACGATGGAGTGCATggcgtaactcgcgcggc
aacaaaCTGGACTTCTGTTGgctgatcatattgggcgttttggcgttacc
accctcgaaccAACCGGCGCCTTCATCATTccgcaactctgtccaccatt
ttaaatgagttaacaatagatccaaaagggcgccctcatcaagaaagatc
atttgcttcggtctccggctttgggaagtagtaatgttttcgattgtttt
cgatggaaaatggtaagaaacttaagtttacaagtgtcatttatttttgc
tagctgatagaatggcaggatcctggatggtttccctaactgtagAGAAC
ccctttttttgttgttgtgacATACTAAATGGTTTCTTCAGTTAAAGACG
TTTATTATTCAAGTAAtctattctgaattttttaactGGTAAAAACTAAA
ACGGTTCAAAAATTTGTCCCATCCGCAACAACACAAAAgtcttaagagcc
attttttaaaaaaatcttcagaatataGAAAGTCTGATACCTGATCCTCT
Tagattttgaggaaattttgaccaaatgatctatcacacaagaaaataag
accctgaaacTCAAGTAGTTTTGCAGATATAGTGTCtcagataggctact
aagcgaaaattgacccctaaaaatcatgaactctggtggggagcagattt
tgaaagccaatgaacagtctaaagctaatcacaactcttggacttagaaa
ttttgctgtaaagcgcaaattattgatcctaaggcttaggtttttCCTCA
TCTTAAATTCACTGaagaaagcaggaatttgatgcgagagttagattgtc
aacaaagtgccgtaaaaaatcattgaataaaagatagaagaacttaaaat
cttaaatatttttattttgaagaataggtgcaaaaaagtgaaacatagaa
aagtttcattttttattgcattATTCGAAAttggggatttggaaaatttt
ctatgtttagttttttgcacaaacccctgtaactatgggcaagcaccccg
ttgctaagatgttggcttgaaatcgaaaatgaaatcactcaaaacaaaag
taaaatcggcctgtaatcttgatataccaGTTTAAGTCTACACTGACTGA
ACAGCTTTGCACCCTGTTTTGCTAAGGTGCTGTCATGTAATTTCAAATTA
GCAGATCTCAATTTAGGAGGCTGAAGTTTGctatttgaaagaaattataa
aaactaataaatattttcatagaGAGCAAGCCCAATAGCTTGTATCCTAA
ATTTAATCAAAAGGTAAAGGTGCGCCTTACAGTTAATGCGACTCTCAAAC
TCCATCCCTGACCCTTACTGGTAATAAACTAATATCCTCTATAGCTCAAA
ATGACAGGTaaggaaaaaatagaaaaacttcatttttagaGGTTCTGTTT
TTTACATTTAATTTTCAGTCTGTTGGATGTAAAGACAAAAAGGGTATGGC
TGAGATAAAAAAATCTGACTATCATGTGACCCTAGAATGGCTAGATCATA
GCTTGCTTATTTGAATTCGATACGTTTGCCATATTAAGTTGTTGAAAAAA
GATTACAACATTTGTTTTATAAATNCGATACGTTTGCCATATTAAGTTGA
TGAAAAAAGATTACAACATTTGTTTTATCAATTCAAGATGATGGCAAAAt
atcgaaaagcttttgcttgAATTTTTAAAACAGATGTTGTTATCTCTTTT
CATCAACTTGCTTATGTCTTCAATTTATTTTAGGGTCTTTTTGTTGGTGC
CAACTCAGGAAGGGTTTACATTTGTGGGCAAGCAGATGATTTTTCACAAC
AAAAATGCGTTTGTGTTGCACCTAGCCTTTATCAGTTGATCTGGAAAGGT
CCTGAGCAACCTGTTCAATACAAACCAGCTTGTATGTCCAATGGATGCTA
TGGGTGCTTTGATCCTGTCATGAGACATCGCTTGTTTAGATTCAAACAAT
TTTAAACTCTTTATCAACTCTTTACTAGAGTTACTAAGATTTGAGCGCaa
ttttttgatcaatttttgatTCAACAGATTGGGTTTTTAAGTTTTAGCAT
TGTTTGGTGagttatcataccatcataaaCTGATTTTTAGAGATTATTTA
TTAATTATATAAATTCTTTTTGGAATTTCATCCTATAATTTTAAAATCCC
ATTACCAATTTATgtgttttgttaaaattttgtcAGTTCTTTTGcattca
tttttacattttcatatgtaatttttcattttggcaATCTGAAAACATTT
GTATATTTAAAGGTTGTACAATAATTTATCTTGTGAAGTAATTTAATTTA
ACAATGGAGAAAAAGAATTACCTTAAATTTTCTGCCTCAATTGCTGCAGC
TTCATTGAGGCTTTTTCGTGAATGCTacacaatcatggtcgaaataaatt
tagattttttgttttaaggtttttcagaatttagagCTCTgacgagaatt
gctattttagtacttccactttctttcattggatatttcgattttagagg
tgTTCAATAGCTTCTAGgttatattccaagccttattggaacaattctga
tatttttaatccagagatcctaaggtcgtaagtcgAGTCTCTCATGTTAa
agctcagagttaaaactctactttccaactgtagtttatacacacttaaa
aattatttatggtgttcacaattttttttaatattttgtccatgattgta
ggttTTTATGGGGAAATACAGGTTATGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007547TCONS_00007547Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007547-proteinTCONS_00007547-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000078supercontigsc0000078:74630..80908 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
54.3	52.74	26.43	18.64	15.28	10.77	25.17	25.98	36.91	33.37	29.62	33.33	17.37	17.04	19.43	22.37	26.67	25.16	21.88	20.75	22.83	21.75	90.46	79.31	18.63	19.48	24.78	24	49.92	54.48