XLOC_004365 (gene) - C. hemisphaerica

Overview
NameXLOC_004365
Unique NameXLOC_004365
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000079:131163..142337+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004365 ID=XLOC_004365|Name=XLOC_004365|organism=Clytia hemisphaerica|type=gene|length=11175bp|location=Sequence derived from alignment at sc0000079:131163..142337+ (Clytia hemisphaerica)
cttcacaggaaaattaaatgaaaattttagctcttaattaaaaataagtt atgaaatgtttattttgtcACCCCTTGTCTACTCCAAACATGAGTTAACT ATAAAATGCCTTCATTTAAACAAAAATCACAGTTACAACCAAATCATACG CGATGAAGACTTTAATCATTTTAGCAGCAGTGATAGTTGCCACCTTAGGT AAGATCTCGTGCTTAGCGTATTATCATCTAAACGGGGAAAAAGTTGGCAT CTAACTTTATCAAATCGATTTTAGCTTAATTTTTGTATGTATGATGCCAG TAATAATACACCTATTCATGACacgcaccattgcaatgtcttgtTTGTCT GCCTTGGTTGTAAGTGATGTAAAATCAGTCATTTTCAACAAATCAGCAAA GATTGGCAGATGTTTTACTTTCTCACTTAAATTGTAATTTTAAATGACAT GAACTTAATTCTTTATGATTCACTTTAGGGTGCCGAGATCTAAGCACCTA CTGTCAACGTTGGGCAAGATATTGCAGAACAAATTCATACGTTCAAAAAA AATGCCCGAAAACCTGCAACCGATGCCCCGCACCGCCAACCAGACAACCA GGTAATTAAATTAGTTGGGTTTGGAAAAAGCAGGGTGTTTGGAAAAAGTG GGGTGGGTGGAAAAagtctcaaaacttaataagcggggggggggNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggggggggggggggtt ggtatagaaatgtcctgggtggaaaatctttgaaaaggaggctaatacag cagaattaggggaACATGGGGAactttcataaaattttttgaaagattaa ttagcgggggatgcttattaggtacctgagagtaggTTAAAACATGAAAC CATTTCAAAGAACGTGAATTTCCATTTTGATAATCGATGTACTACTGATG GTTCAGAATATCATCATTGTTTTTTATGTATCGCTTCCGATTACCCGTCT ATGAGCTTTATGAGTCATGAAACGCTAACACACTCCTGTCTCAGATAGGC TGATTGTATATCACTACAGATTTGTGCCTCAAGTAAATTcgtcaaattaa atccccgtcAAAATTTCGACATATCCtcgccaaaaaaaatttctctttca ccaacctttttaaaattttaagaacaaatatcctacaatttatATCTAGA AATAATTCTTGGaagtaaaatatattacaaaaattaatcgatacatcttt tttatttccgTAATACTTATCTTCGTAGCCTATCTTATGTTcaataaatc ttcaattttttcttttcaaaagtatGTACAGATAACCATAGTAGCTGCTC ACGATGGGCAATCATTTGCAAAACCAATGATTATGTAAAAAAACAGTGCC GAAGAACTTGCAACTTATGCGGTGGACCAAACACCCCGGCTCCACCAACC AACCCACCTAAGACAAACGCCCCGGCAACAAACCCACCTAAGACAAACGC CCCAGCAACAAACCCACCTAGAACAAACGCTCCACCAACAAGTGCACCAG GAACCTACCCACCCCAAGGATCATGTGGACGTCCACAAGTTGCAATGTCC AGAGTTGTCGGTGGAAAAGATGCAAAAGCTCATTCATGGCCATGGCAAAT CGGACTTCACCGCAACGGTGGATTTATGTGTGGAGGTTCAATCATCAACA GCCGATGGGTTGTTACTGCTGCTCATTGTGTACATCGAAGAAGTGCTCGT GACTTCAAAGTCAAATTAGGTAAAAGCTTATCGAAAAACAGTTTATTTTG ATATTGAGAACCCTTTTGCTTGTAGGAAAAGGTACAGTGTTTTCGAGCGT gcaacattttctgaaaaatgtgaaaaattttctttaaatcaatttgaaac gtgtatacacgtcaCTCGGGTTTGAAGGGTTAAAGCTAGATTTGAAATAG CATTACATCTCTATCGAAATTGAAGTTctgtaaaaattgttttcaattgT TCAGGTGACCACGATAGACGAAGAAGTGAAGGTGAACAATTCATCCAAGT CTCCAAAATCATCACTCATCAAGGTTACCAAAACAGCAGATTGAACAATG ATATTGCTTTGTTACAATTGGCTACTCCAGCTAAATTCGGACGCAATGTT CAACCTGTCTGTTTACCAAACCAAGGAGATTCTCCACAAGTTGGTAGCAA ATGTTACATTACAGGTAGGACCAATACAGATGATATCTATATAACAAAGG CGAGactaaaataaaatctaaactTCGCTCTCCCCagtgataatattgaa agtacAGTAAAAAAAGAAAGTCCTTTGGTTCGTAGCCAAATACAGTTGAG CCTCAAAAACTTGAACAGCTCCCTTAACTCGAACTTAGCTggccccttca gttaacaatgccctaAAAAACCTTGCCATGATTCGAAGAAATTCCCCCCC CCCTTGCGCGTGGTTGTGTTACAGAGACTCAACTAAAGTAACATTGCTTT TGTTTGATGGCTGCAAAAGAGAGTTTTCCGGTAATTTCAGCAATGTTCAG TGTTTCATTTTAACTTATTACTCAGGATTACGCCAATATCTATAATATTG ACTCTATCAGTGATTAATATCCATAATCATTATATACATCAACAGCTGTT GAAAGTCTACCAATTACATTATCATTTTTTAAGGATGGGGAAAAATCAGA CATCCAGGGTACTCACACACCATCCTTCAACAACTTGCTATGAAAATCCA AAGCAAATCTACTTGTTCAAGACAGAATGCAAAATATGCTCCAATCACCG ATCAAATGTTGTGCGCTGCCAACACTGATGTCTCTGCCAATCAATCTGGT TGCCATGGTGATTCAGGTGGTCCATTCGTTTGTCAAAACAGTAATGGTTC ATGGACATTACATGGAGCTGTCAGCTGGGGATCACCAAGATGTGACATCA AAGATGCTTTCACTGTCTTTGCCAGAGTTGGACAATTTAGAAACTGGATC GAACAAAACATGAAGTAAACCAGCCAATGATATTGAACGACTTTTTCTAG GATTTTTTTAGAGTCACAATATGAGAGCATTATTGTTTGAATAAATCCTA ATTAAAAAGATATGTCTAAATACTATTCTAAAATTTAGTGTGTGAAAAAT GATGTGCTTCATTCTGACTAGATGTACGCTTTTATACCAATTAAATTTTG AgtcaggctgggctgttctaAATGTTATGAATTTTTCAGCCTCATGGTCT CAATTGGCCttatgaaaaaagtgtttacgTAAATTTACTAATATTTTTAA CTTGTAAgctttaaatggaaaaaaaaggaaaactacCAATATTTTATTAA GGATTTTAACTACCAGTTGCTTTTTGGCCCAGCATTTGGCCTTTCATATT TGCCCAGTTCGTGTTGTATGTCCGTCCTTTCACTTTCATAATTCAAGATT ATTCTGGAAGAAATGGTGCCTTGCAACATTGCGAGCAAATATTCGACTGT TGGTCCTGACTTATTTTTTTACCTATGATCTGGAATTTCTGAGCCTTTAG GAAGTGTCTAAGTTCGACTGAGAAGTCAATATTGGAGTTCAACTTCGATA TCTTGAAATTTGACATAGTTGAGTCCCGAGTGGAATTCGAACCCACACAT GAAACGCACCCAAATCAGGCAGTAGAACGTCAAATTATAAGGTGTCAATT TTATATGGgatgaagtaaaaaaaaataatagcccatgtattcgttttttt ttccgGCTAGTTGAAATATGGGCGTGGTTATGAAGTATTTGAGTTAAGTT ATTGACTTTATTTCGTGAGAATGATGcaattttaaagattatttataCTT CTCCAAGTAAATATTCCTTATTTGTATGTTTTCACAGCTTTGGATGTATa ttacaaaactaaaaaaattgcaaagatTTGTTTTGGTTAGCTGTCGTATA TACATATACTTCGTTCTCCTAATagttgatttttaatttttactgTTGAA CTTGTTTTCaagatgaaaatgtttttaattttaacaGCAGTATTTTTAGC TGCGTTAGGTAAAGCTAGAACAAGAAGCTTTGCTCAAACAACACTAAACT CACCAAGTACAAATATTCCAGGAACAAACCTACCAAAAGGATCATGTGGA CGTCCACAAGTTGCAATGACAAGAATTATCGGAGGACAAGACGCAAAGGC TTATTCATGGCCATGGCAAATCGGACTTCACCGTAACGGCCGATTTATAT GTGGAGGATCAATAATCAATAGCCGATGGGTTGTTACTGCTGCTCATTGT GTTTTGTATAGATCTGCTCATGAATTCAAGGTCAAATTAGGTAAGTCGTT TGTTGTTGCGTTGGGGCGGGGAAGGGCGCTCTAATACACCCTCTTCTCGc aaacccggtaggatttttttcagccagtggggatgacaataacggactaa aactcgaaGGGGATTTATATTCCCATATTTCTTATGGCTAGGGATtcata ttcttttgttttcaagtcaggaGATTCCgggtggggatgggaaaaatagt ataATGTTTTGCAGTGAGCATTGGTTTATTTAGTTATTTTCGGTAGGAAA GAAATCGGAGTATAATTTTAAACCAGGAAGGacaaattttggccaatttt tcagtgggggtctgtgagaaggggttatTTAATCCTATGAAGTAGGGTAA AGAGTTGTTTCATTATTCCAGGAGACCACAACAGAAATGTAAGCGAAGGT GAACAATTCATCCAAGTCTCCAAATTTATTATccacaaaaattacaaaaa ctcGAACAATGATATTGCTTTGTTACAATTGGCACAACCAGCAAGATTCG GAAAAAATGTTCAACCAGTCTGTTTACCAAACCAAGGAGATGCACCACAA GTTGGCAGCAAATGTTACATCACAGGTGAGCctttttttaatagattttt taaTCAATCCATCAAACAAGATATCAGCACGCAATACTGCTAAGTCCCTA CAATGAGTATGATATGGCcgagttttcaaaaatcaaccTCTGACGACCAA GTGAGGAATATTATCATGTTAATaactagcagactgtatcagtaacATGt ttactacagggtgtcccaaaaaaagtatcgagtcatACTATTCTATAGAA AGAtggttcttgtgtgtgtttctcTAAATTCGTAATGTTTATTCTCatat taatttcaatttcatgagacattttttatgaataacttttacaaataaat atttctcaataactttaacgtcatgaaaattgggtatatattttcttaga TTTTGTTAATTAAACACATGCAACAACcatctactcagaatcatgttcgg aATCGATactttttccggacaccctgtattaaCAAATTCCCCATAAAACC TTCAAGCgcgtaattgaaatgagtttctttcaaaataaatcttttaattg attcccaaatgtatgaTAACAACAATTACTAAATTATTGATCATGGTATt gttacttcaatggaatcgaaataatagacaggtCTTTGGGTGTAACAATG AACTTAAATTACACCCTTAATCCAAGATTCAGGATTGGCGTCATGGTTAA TTTTCTCTGCGCTAATTGCGCGCTTAATAAAATTGCTATTTACCGTCACA GGTCGTAATATGGGTCAGCATGTGCATTTTCACGTATTTGTGTTGCAAGT GAATGGGAACTAAAATTTGttctaatagacgatatcggatttagataaat gcaatgcattctggtttctagggactctcaaaggaattataatctattat aattgatctaatataattcctttgagagtccctagaaaccagaatgcatt gcatttatctaaacccgatatcgtctattgcggAAAATTCGAGTTTTTAG AGACTTGAGGATTTAATTCATGAAGGGGCCAGAAATATATCACAGCTAAG GAGACATTCCATTTACAGACTAAATTAAGGAAGATTAAGGAAACTCTATT GTATAAGTAAATGAATCTCATTTAATTTAAGGATGGGGAAAAACTAAACA CCCGGGCAACTCACACATCATCCTTCAACAACTTGCATTGAAAGTACTTA CCAAATCTGCTTGTTCCCAGAGAAATGGAAAATATCATCCAGTCACTGAT CAAATGCTTTGCGCTGCCAACACTGACAATCCGGCAAATCAATCCAGTTG TCATGGTGATTCAGGTGGTCCATTTGTTTGTCAAAATGGCGATGGCTCAT GGACATTACAAGGTGTTGTCAGCTGGGGATCACCAAGATGTGACAAGAAT GATGCTTTCACTGTCTTTGTAAGAGTTGGACAGCTTAGAAGCTGGATTAA TCAGAATATGAAATGAACGAGCATAATAATTTTACTTATCATTAGGACTT TTTATGCTATCTCTAACAATGAGTAAACAGATAACCCAACCTACTCGAAA ACAGCATTTGgtctttttctatttctattgcGCCACAATGTACACCCTGA ACCCTATTCTCACTATTCTATCGGAAGAATTTCTGCAAATATATGACTAA AACCTTCCCTAAGCACTTTTTGTGGGAAGGTGAATCAAATATAAtcgaaa gtttttgaaatgcttcttataaaattggttctaataaaaaaatttttgca attcaaTCCAAATTTGTTCGTTAGTTCTAATACTAAAATCTAAATCTTCA ACTGGCATTTaacaatttgatattttaatcaAGGAAAGTCAACGTGCTCA AAATGTCTGGACAtacttttttgctattttttaatgttttttttgagtca aaaagtgataaaatctGATTTCAGTTTCTTCATTTTACTCCTGTGTCTAA AAAGTCTTCGACTGAATACTATAACAGGAGTATTTATTATAATACAGTTG TTCAAATATGGCATTTCTACAGaataaaattattaaataaTCAACTATTG CAGAAAAGTATGGGAAAACCCAGGTGCACTCcattaattaaaatttgaaa cattttggtGGGTAAAGTTAGAATTATTGAATTAAACTTGTAAAATTGtt accaaaaaaattattaacattttaaattttatcatttcatACAAGGGTAT TGTTTAGACAGCTTGAGTAAATTTCATCTTTTAATTATATGGTATGCAAA ATGCGTGTCAATGGAGTACCGATGCAAAGGAGGTGAAACAATCAAGTTTT TTATTTACTGAACCTTTGAAAGGTTTTCCTATATAAATACCCCTGTTTTG TGTGAAATGTCACATTCAAAACTCGTCAGGATGAAGACTTTGATCGTTTT AGCAGCCTTGATTGTGGCCACTTTGGGTAAGTCATCTGTTCCAATTAATT CATGAAAACGAAATATCTTAAAGTGAAGGAGGaatttttggtggaaagaa aatattttccgccaatccgccaaatttaaaattattttttcatgaattcc cCTAAGAGAGATTTGCTTTTTCGATAATGGTTTtggtaaaaaatataatt taaccctattcggcctagggggggggggctgtccctgttcggaggtcaaa ttattggtaatagctcctgaaataatagagcttttgccatgaaatcttct gtaaattcctaacttttattcagcttaaaataaaaaaaaatttgacacct aaaaatttcaCACCTTGaacatgatgacatttctgacagtaaggtgtcac aaaaattgacacttttacaataaaaatttattttttatgtcaaatatatc ctttaaaccgtaatttattgaatatttaagataaaataagcattctaaac tcaggcaacttttttcttaagcctttgaaaatacaatagctatttataat aacaaaggaaatgagttttgtcaaaagttaccttatgtgacaaggatctt gtgtgccaaattcatccaaaaagaaccattagatcgaaagttaaGTACAG GAAAAATgaccaaattaaatttccgccaAAATAGTTTCCTAAAAGGTTGT TGATACCGATTTTGTCAACTAAATTGCATCTTGACCATCGGAACATTAAA CAATAGAtattaatacaccttttctacCGTAGCTGTCTATTCACCGCGTG GacatttttttgtccattttaccacCTTAAAACTGCCCCAGTCTATTTTT CGCaactaaagacaatagaaaaaaatgtaaaaaaaggattggatcgagtt tggggtggtaaattaaatattaAAGTTGCACGCGCCTGGCCgcacgacta cggtcgaaaaggtgtattaagaATAATGAGTTTGCCTATGGTGTACTTAC ATATACAAATTTTAGCAACATTCTATTTCAATATTTAGCTTGCACAAATA AATCTACTTTTTGTGATCAATACGATAAAGCCATTTGTCATCATGATTGG ATGAAAGTCAACTGCCAAAAGTTGTGTAATCTATGTGGTCCATCTACACA AGCTCCAACACAAGCACCAGGTAAAATGATCAGAATATATCCATAATTAA CGGAATTTTTGAGACTCCTTATATCAGTGTTCTAAATGTTacaaaatttt ttatataaaatcaTTTCTGCTCAAGTAAAATTCCATAGTATCCGTTTGTT GGAATGATTTTCGAATGTCACACTCATTGATGATTAAATTTCAGGAGGAT GCGTCGACAAGAATACAAATTGTCCACATTGGGCATCACATTGCAAAACC AATGCATACGTGAAAGAAAACTGCAAGAAAAGTTGTAACATGTGTGGTCC AAGTACCCCTGCCCCACCAACAAGTGCACCAGGAACCTACCCACCCCAAG GATCATGTGGACGTCCACAAGTTGCAATGTCCAGAGTTGTCGGTGGAAAA GATGCAAAAGCTCATTCATGGCCATGGCAAATCGGACTTCACCGCAACGG TGGATTTATGTGCGGAGGTTCAATCATCAACAGCCGATGGGTTGTTACTG CTGCTCATTGTGTACATCGAAGAAGTGCGAGTGACTTCAAAGTCAAATTA GGTAATCAGTGCTAGTTCCTATTGTCATTTTCCTTTTATCTGTCCTTGAG TATATGTATGGCTCATTGACCATCGAGTTACACATTTTTATTTGTAAGCA TATCTTAACTCATATCATGGAAAAACTTAAGTAAGCATTGTCTAAGCATA TACTGAACCTCAAGTTAACAAAATTATAAAGCCCTTAATTTCCTTAAATC CAAAAAACATGCTTATAAAATGCAACTTATTATCATCACATTGACTTAAA ATAAGCATATGCAAGAAACGTAGGCTCAAAATATCACACTATGCTTATAA GAAACCGTGTAGTATATATTAGTAGAATAAAAGACTTTTTACTCAAATAT TCAGGAGACCACGATAGGCGAAGAAACGAAGGTGAACAATTCATCCAAGT CTCAAAAATCATCACTCATCAAGGTTATGGAAGATTGAACAATGATATTG CTTTGTTACAATTGGCTACTCCAGCAAAATTCGGACGAAATGTTCAACCA GTCTGCTTACCCAACCAAGGAGATGCTCCACAAGTTGGTAGCAAGTGTTA CATTACGGGTAGGATAGCACATTGTTTATATTTTCTGTATGTTATCATTC AATATTGATTGGAAATGAGACAAAACTAAAAGTACCAGTTTCTTATAGAC AAcaaataaattattaaaaattacaaGTAAAATTTCCCACCTTGATCGCC TCGTAAGAACTTATAATTATGAAAGGTTAATTCAAATCCAATTGTGAGTT AATAAATTATTTTCTGGTATTCTGGTTCTGACTGTCCATCTTTTGCTCTT CCAATTTTGATTGTTAATTACAATAGGCAAGAAGTTGGTTGGCTCAAGTA AAGGCTTTGCTTTCTTTTGGCGTCTCAAGTAAAGGCTTTgctcttttttg acgtcaataaaatttcttcttttaggaTGGGGGAAAATAAGACATCCTGG TTACTCACACACCATCCTTCAACAACTTGCTTTGACCATCCAAGACAAAT CTACTTGTTCAAGAATGAATGGAAAATATGCACCAATCACTGACGCTATG CTTTGTGCTGCTAACACTGATGTCTCTGCCAATCAATCTGGTTGCCATGG TGATTCAGGTGGTCCATTTGTTTGTCAAAACAGTAATGGTTCATGGACAT TACATGGAGCTGTTAGCTGGGGATCACCAAGATGTGACATCAAAGATGCT TTCACTGTCTTTGCCAGAGTTGGACAATTTAGAAACTGGATCGAACAAAA CATGAAATGAAATGTTAAATAGtat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007698TCONS_00007698Clytia hemisphaericatranscript
TCONS_00007699TCONS_00007699Clytia hemisphaericatranscript
TCONS_00007700TCONS_00007700Clytia hemisphaericatranscript
TCONS_00007701TCONS_00007701Clytia hemisphaericatranscript
TCONS_00007702TCONS_00007702Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079supercontigsc0000079:131163..142337 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CTRB1chymotrypsinogen B precursor Homo Sapiens
PRSS8prostasin preproprotein Homo Sapiens
CELA3Achymotrypsin-like elastase family member 3A preproprotein Homo Sapiens
CTRB2chymotrypsinogen B2 precursor Homo Sapiens
TPSG1tryptase gamma preproprotein Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.04 0 0.04 0 0.33 0.57 0.32 1.5 2.43 0.3 448.87 467.68 138.13 427.48 223.77 284.77 1797.18 1471.32 1034.44 1238.73 602.96 860.09 547.36 607.16 0 0 0.19 0.27