XLOC_004379 (gene) - C. hemisphaerica

Overview
NameXLOC_004379
Unique NameXLOC_004379
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000079:108522..113180-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004379 ID=XLOC_004379|Name=XLOC_004379|organism=Clytia hemisphaerica|type=gene|length=4659bp|location=Sequence derived from alignment at sc0000079:108522..113180- (Clytia hemisphaerica)
GTATATGCTGGCGTGCTACATACGAACGCTATGTGTAAACACAGTCCCTG GGATGAGTCAAAAAGTAAGTATATTAACTACTTCCCTGTGTGATTTTTCC AAAAACTCCCATCCTCTTTTAATACCAAGTACCCCCTGGGCAAAAAGGGA TACAGGGATGTGCCGCTAGGGTAGGCTCAGGTAGGGTCGCAAAATCACCA AAATAGAGAAATCAGTCCCTCGTAAGAATTTGGAAAAAATATGCAAAATT TTGAGAAAGACTAGGAGTGTCAGTCCCATTCAGGGTCACTTTTTTCCAAA AATCGAGTTCCACATAGGATCTATTTTTTCAAAGCGGACCCGGTGAAATT CTTGAGCCAGAAGTTGAGTTTTTTGCAGAATGGAATGGAAAATAATAGAT TATCATTGGTAAATCTTCAAAGTTAATCAGCCGTCAGGCCGAAAATTTTT CAAAAGAGGCTCTGATAAATGAATGGTTAAAAAGACTTCATTTTAGATCG TTTTGATATGTCAAAATAAATTTCACATTCCCCTAACCTAAAATCCTCCA GCTCCTCTAGTAAATACTTTATGACCGCTCCCTAAAGACATTTATGTGTA CTCTTATATTTCAGATCCTGTCTTTAATATTAATACCAATGATTTATCAC CAAGTAAAGGTTTGGATTTAAAATTCATCAAAGAAACTTTCAAAAAATTT ATTGGTGGAAATTTCATCAATTGTTCTTCCGCAAATCAAACCACATTTAT CCCTGGTATAAACAACACATCAGAAATAAATTTACCAGATAACTTACAAA TTAGAGGACTTTCAAATCTCAGTTATCATCAAATGTGCCGAAACCTCAGT ACTGGGAAATCCGTTTTCAATATCGGGAGATTGAATCGGTATTATTATCC GATACGGAATGTTGTTTTGGAAAATCCGCATTTTTTCATAACAAAGTACG GTGATTCTTTGACATTACTTGCTGTTGGAGAACTATATTTTTGTGGCTTT GACATGGTTACTAGAGCTTCAAAAAAAGCTGTTCTTGAAGTCAAGAAAAA AGTAACAACAATTACGATTGACGGATTAGAACCTGAATTCAAACCATCCT TAATAGCAGATGCAGGGATTGTAAACATCAAACGTTTTCGGAACTACAAA ATCGATCAAATGTCTCGATATAATTTCAATTATTTGACTGATCTCAAATT AAGTCGAAATACAAAATTGACCATGCTGCTTCCACATGGAGGAGACCATG AATCTGTAATGCTGGTCCTTCGAGATATTGCATCAAATTTCAAGACCAGA TATAATGATGCAACAACAAGTGAAATTGTACCTCATAAAAGTATTGTCTC AGAGATGTTTTCTTGTTGCAAAGATTTTCTGGGAGTTTATTTCAAATTGA AAATGGAATTGGTGCATTTGACCAAGATGTTGATTCCTCAATATTATCAT GAAATCTTGAATCCGAAATGGCCCTGGGATGAAATTGTTGAAGATCTAAC GGTAAGAAATTCTCAATGATATTCTGTCCTTATTTGAATAAATCTTTATT TAAAAACTCAGGTTATAATTCGAAAATTTTCGATTCAGAGTAACACCCAG AATAATTGTGCATAACAACCTCAATCTAAGATTATGGGTCCTTTTACACC GGCCCATATTGGCTTTATTTTTACTTCGTTGGTGCGTAGTAAGCAGCTGG TATAAGCTAAGGCCAGACTATATGGAAAAAAATATCTCAGGCGAAAAAAA GATTAAATGGAACCGGTGCTAAATTAGGGCCGACGTAAATAGGACCGATA AGGTATAGCGATATCCGATGATCTGATTCCCAAAAATCATTATTCCAAAG TTACTAATTTTCACAATGTTTAGCACACAGAACTATCTTTTTTTCAGTTC AAGATTTTATTGCTAAGAGGTTCCTTCAAAAGTGGGAAAAGCAGGAAAAT GTTATCAAGTATTCATTCACAAATAATTAAACTGATGAAGAAATACTCCA TTTACGAGGGGATGCTGGTAGAAACGATAGGATCCCTCACTGAGGATGCT AAAGATTTGCCAAGATATCTCCAGCCTGGTTCACGGATCGATGCTGTTCT CAAATATACGAATAAATTATTTGCTGAAATCAAGTTTTATCAACCACAAA ATGCTGAATGTATATCCATGCAGGTAATTCATTTTCAGATTAACAAATAA GATTTGTCATATTCACCGATTTTATAATTTTTTATATTTTCATGACATAA CAATTTTGCATATCTCTTTTTAGAATCCGAATACGGATTTCAGGTTAAGA TATTGCTCAGACCTCACCCACGCCCTCCTTCAGGTACCGCCCAGCACCCA CCTTCCCAATAAAGGTCGCACTTTTAGAGAAAATAACGAATCAGTGTAAT AAAAAATAAGTACTCCGGGAATACTTTTTGTCCTGAGAAATTACTGTACC GGAAAGAATTTAAGGACGAGACTGTTACTATTAAAAAAAGTACTGTTTCG AAGAATATTTTTTTTTGGTGACGCCGGCCAGGTTTGTTTTTGATAAAAAT TTTTATGTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGAAAAGTCGAAA ATTTTCTTCGTCGCCCAACCATGGTGGGCGACATATTTTTTTGGCCCCCT CAATTCCATTCGCACGCCGGGGGCCATGTTTTATCAAATGTTTCAATTGT TTCAAGTTTTAAATCAAAATTATATTCTCATGTCTTTCTTCGTGACTTAT TTCATAGAGTGATGGTTGGAAAGATTTCAATCGATTATTATCGAATCTGA AACGATTCTCAAAATCATTTATCAGGCGCTCTTTAAAACAGAACAAAACA TGTGGTAAAGATACATTTATGATGTCTTCCATCACAATTAAGTTCAATAG TATGTTTGGTTATTGGATGAGTCCAACAATTATTGTCCGTATGGTGGAAT CAAAACATGAAGTCAAGTATGTAGCAAAAAGACTGAACTTGTATAAATTC ATTTCAGAAATTCTGTTAAGATGAAAATTTTTCATATCATATATAAAATT ACTCAAAAAATATATGAGATAAGACTTATTAGCTATTCGATCCCTGTCAG TGGGGGAAGCTTTAAGAATAAAGCCCGGGCACTCGATTTCCAACCAACAA CCACCTGAAAATGAGCCTGAGATGTCGACACAATGTGCACGACACAATGT GCAAAGCAAATCAGAACTACTAAAGATACAACAGATTTTTACTGCCAGGA CTTGCAATTCAGCAGCCCCAAACACTAAAGTATCCTGCTAAAAGAAGACC CTTATAGTGCATTTTATCAAAAGTACACCCCTTACAAAGCATTTCGCCGG TCTCAAAAAACCTACCCTTAAGGACGTCACATGCCATGGGTTGGACCATA TGAGTGCCCCCCCCCCACCAGGAATGACGAATTGTGTGACAGCTTGGGTA TGATAGAAATTAGAAGAATATTAATGCTGCTGGTTCAGTATAATCAAACG GGTGACCATTGACTTCCAAGTCCAAAGAGTTGGACTCAAGACTTCTGCAT GGGAAATGAAACCACTTATTTCCCATCAAGAACGCCCGCGCGTGGTTTTT CCACAAACGCCGGATTGAAATTAAAATCTATAGCTAGATTTCAAAAAATG CAGTCTTCAAAAACAAAGGAACCGCTAGATATAATCTGTCGTCATGACTA CGGCGCATTCTAGGCGCACTCTGGATGGGAAATAAGTTTCTTGCCTGGGT AAGATTAGAGATTCTACTATAGCCCTTTGGGCTTAACTCAATGTGGGTAA CGCTCAACAGGAATTTATATATAACAATATAATGTAATGTATTATATCAA AAAAGAGTATATCAAAATATAAAGTACACATATAAATTTATATTATATAA TATGGAAATAATGTATTTTTGAGAATTTAAAAAAATAATGCTAATTATAA GAAATATTAAACTATAATAGCAAATGGTTGATCCATTTAAATACTGCGGC ATAGCTGTTTTTAGGCAAACTATTTACAAAGTAAAAGCGGGGTTTTCTCA CATCTTGGATATCTAACTAGCATAAAGGAATTTTTGAAAGAATCCCGGAA TCACATATGGTATATTATCTCCCTCAAAACACCCCTGTTTCACAGCCCCG TTGGAATTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007724TCONS_00007724Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079supercontigsc0000079:108522..113180 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.04 0.1 0 0.12 0.19 1.98 2.7 0.57 1.19 0.85 0.44 1.11 1.82 0.02 0.08 1.78 0.75 1.39 1.66 46.02 39.68 3.75 4.39 16.13 9.21 0.32 0.24 4.8 5.24