XLOC_004478 (gene) - C. hemisphaerica

Overview
NameXLOC_004478
Unique NameXLOC_004478
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000080:643230..650527-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004478 ID=XLOC_004478|Name=XLOC_004478|organism=Clytia hemisphaerica|type=gene|length=7298bp|location=Sequence derived from alignment at sc0000080:643230..650527- (Clytia hemisphaerica)
GTCGCGTATATGTTGTACTACATGATATCCATCATAAACTTTTTGTGCCA TCCATGAAAAAGATTCATAAAGAGTTTTAGTGAACGTCACTCCCTCTCTC TTTATTTGTTTACCTGATGCTTTCTCGACGTGGAGCTCTCGTAAGTGTTT TAAGTACTTAATCTCATCCCAAGTCATTCTCTTACACATCTTGCGTACAG AAAAAGGTATATCATGTCGTATGTGAATCGTTTTTGTTTCGGCTGAATCG GGTGTATCGTATGAATTTTCCCTCTTATCATATTNGTTTTTGTTTCGGCT GAATCGGGTGAATCGAATGAATTTTCCCTTTTATCATATCGAATACACAT ATTTCTCATAAAAGTATTTTTCGCTTTCAACATTTCGACTTCATGCCAGA AATCTTGATCTATATTTTTCAGAATGTTCCAAAATGTTTTATTGAAATGA TTATATAAAATAACATCAGCCTGACTCCATTTAGTGATTTTCTTTTGTAG AGGTTTTGAGATATGTCTCCGCCACGATTCCGCTCGATTCTTTAATCGAA AGTAAACAAAGTCATCTAATTCCCAACACAATAAACGTTTTAAGAGAACA ATAGATTCATCAAAATATTCCATCATCATCACCAAATGAAATTGATGATC CAACTCCTCCAGCTTCTTATAAATCTCTTTATTGTTTTTAAAATCTTTCG ATTCTAACCCTAAATCATAAAACATTCCATTTTGGATCAATTTCAATCGA TCACTATTGATCCTCAAATCTTGAGTCAGAACATAATTGACTAAAACTTT TTCAGGGTCTTTAAAAAACTCTGTTAAAGTGTCTTCACTTTTCTTCATTC CCAAAATCTTATCAAAAGTCATGTACGAGAAGCTAGATTCGAACTGGCTG ATGGGATTACGTAATATAGTGACGTAAACAGTATCATTGGGCATCAAATC AGTCATAGGTTGTTTATTGAATCTAGCATGATTACATAATATGTTTGGTT CTGTTCCGTTTAGAGGATAAAATGAAGTGTTCTTAAAAAACCAAGGCCAG TCCAATCGATTGGATCCGATGCTAGGTAAGACGAAGTTGAGATTCCTTGC TTCACCATATCTGTTGAGGATATTGGTGATGGTTGAACTCCCTGTTTTGT GTGTCTTCAGAAACACGATGTTCTTCTTACGTTTGCATGCTCTGTAGAAA GAAAAGACAAATTTTTGTGTTGTAGATTACTTTTTCTAGCTCCCAACTGG GAAAATTTGCCTTGGAGTTTGTCTCTGGTGAAAAATATCCTGCAGTTTCA TCTTGCTTGTTATGGTTAGGGGTTTGAATTTTATTGTTTAAAAATAGTTC TAAAAAAGATTCAGTGAGGATGTCCGAATATTTTTAAACAATAAAATTCA AAACCCCTAACTAATTACAAGCAAAAGTTTTCCATTGGCATTTGATATAC TTTCACTTTATAACTAAAAACTTAGCAAGGGGTTTTGGAGTAATTACTTC ACGGCTACCTTATGTTTCACAGTTTTCATTGTTCAATTCCTTATCTCGAT CAACCCTACTAAACTAATAAGTGGCTTTGGGAAGGAGAACGAGAAATTTT TACTCTTATACTCAAAGAAATTTTTTAGTTTACTTACTTCCGATGATGTA ATCTTTCAACATGTTTCCCACCCACTGGGATCTTCTGTAACATAAATTCT TTTTGTTGCAGAGACAGCGCACCATTCTCGATGAAGTGCCAACATGACCA ATATCGAATGACGAGAGGTACCAGAATGCAGTTCAAAGTCAACAGATAAC ATATGAGCCGAAATCTCGATGCTTTATGTCTCATTTTGACCACGAGTAGG AAACCCTTTGAACTCAATATTTTCACCTTTGCCGGGTTTGTATTCTTTCT CGATTCTTCAATCTAACTCTTTAGTTGAACTGTTTTCTATCTTTCTTTAC ATGCTGAACCTCGGTCAAACAATTTGAACAGTTCGTACACATCTTCAGTA TAAACAAAGATGGCGGCTATTTTAATGATGGTTTCAATTTTGCACGTTTT CAGAAAATTATAGCCTTTTCAAAATTTATCAACACCAAAACAGATAATAG CTTCCATTAATACGAAAAAAGGGACTGGGTGGACTTTCAAGAGAATAGGT CATTAGAATGAACATGGATTTGATATTTTTGAAAATAAATGATTTTCTCA TCTCATTTATTTCGCAACCACTTGAGATTTGTAATTCGTTTCGAATTTCT TCAGGAATGATTCGTTGATAGATATCCCACGGCTTTCAACAACTCCGTGA AGAAACCTGATATCGAAAAAAAGGTCGGTAAAAATCTTTTTGCTGGTTCA TTAGTGTTTATCCGTTAATAAAATTAAATAATACTATAAACAATGAAAAG GGAGAAGGCAAAACAAAAGATGGAAAAAACCTTTTTGTTGTTCATTTTTG TAAGGTCGATTTCTCTAGTGAAGTTCTACAGATAAATAAAAATGTTTTTC ATGATCCAAAATATCCTACATCATGAATAATTGGTGGGTTGAGAAAACAC AATATTCTTTCGAACTGAAAATATAACTTCAGATGAATGTATAATATTAT TTGACGGGTCTACAAGATGTACGCGTTTGTATTTATGTTTTTATACAGCC TAGCCTGGTTTTGTGATGCTATTCTTCTACAACCTTCACAGGCTAATATT TTCCAACCGACTAGCCTCAACTCCTTACTACACACCAGTCATTTGAAGAT TTCAGGTGATGTCAATTATTCGACGATAGGTGATGACATGCACCCAGCAT CCGGTGTTTTGCACTCCTTGGCAGGTGCGAAGAACGAAAGTGGAAAAAGT TTTGAGGTAAACTTCTGATGTGTTTCTGACTTTAGGCCCTGTCACTATTT AAAGAATATCACCACTTTTTTCCTCTTTTTTGCCTCTTTTTTGCCTCTTT TTTGCCTCATAGGCCCCAATCCGTAAACACGGTTGAAAGATGGTTGTTCT TTATGTACTTTATACAAACTTTCGTGAGCAGAAACTTTTGCGATTTTCGC GAAAGTAAATGTCTTTGGAAATTCTTAACAGGGCGATTCGCGAAAGTTTA TGCTCGAGAAAAATTCTCAAAAAGATTGGAAATCTATAAAACCTCAAAAT TGTAATAAATATCAAATTTTTGCCATATTTCTATCCTTTAATACCTTAGT CAAAGAGCAACTGTCTTTATCGGATTTGAGTAATATTTTTCACTCTAAAT GCAATTTTATTTCGAAAAATCTCATTTTTATCAAACGATTCGCGAAAATT TATACTTGCGAAAAACATTTTCCCTCCAATTCGCGAAATTAAATGTCGTG AATTTCTCGCGAAAGTTTCTGCTCGCGAAAGTTTGTACGCCTAAAGTAGC TTGCCGAATTTTTTGTGTTTTGGAAATGTATATTTTGTATAAAGTTATAC AGTTTTCCCCAACTTTCCAGAACACACTTGATTATCTTTCATCGACCACC GACCAACTGGTTGAAATCCTACACAATTTTGAAGTTGGTATGCGCATTGC GGTCCTCACAAATCTCCCAAGAGACACAGATACGAAAGACGTTACAAAAT TGGTCAGTAAAATAGACAGTAACGGAATGCGAGCGGTTCATTTGAATCTC GAAGATGTCAAGGACGTGTCTAGTATATGGTATACCATCAATCGATCAGT CGAATTGAAACTGACCACCTTTGTGTTGTTAATGCCTCCATTTTGCTCAA TGTTGGTCATAGACGTGGCTTTGAGTAAACATTTGACTGATAAAGATCAG AGCTGGATAGCAGTCAACTTGAACAAGAAAAATAAGGTTGCATTAATGAG AGAAAGATTTCATGTCAATAATCTGCTGATTAGAAAACAGCCGAGGAATC ACACGCGCTCACTCGATCGGAGTCAACAGAACAGGTTTGTAGTGAAATGA TAAACGTCTCTCTTTTTGTCCTAGTTTTTAATCAAGTTTATCATGAAAAT TAACAAGTAACTGAAGATTACTATAGAATTTTAAATAGTTCTATATACGA AAGTATTCCATTATCCTAACCCGCTTACATCATTTTCCTTTTTTATCTAG AGATGATAGCGGTAGCTTACAGACGGATCCAGTGTACACCATTGAGCCTC CAAAATGGCGCAAAACAAAGAAATCATCAGATGTTAAACATTTCCTTCGA TTTGCCACCATCTTTTACCACCCACTAGTTTTCCCTCTTCTACATATTCC GAACGAAGCTGGCAGTTGTGAAGTAGGTATGCCATGCCGATTTCCGAAGA AAATCTCCGGACTGTCCGGTGTTCGGTGGATTCCGGCATGTTGTTCCGGA TTGATTTTGGATATTTTGCAGAACGTGATTAAAGATATGAACGTTGTGTT CGATTTGTACGTCGTTGAAGACCAAACGTTCGGTGGTTTTCATAATGGAT CGTGGACGGGGATCGTTCAAGACGTTTATACGGGAAAAGCGGACGTTGGA GTTCACGCAATGACGCAATTACACCAACGTTTGGACTACGTAGATTACAC TGAACCTATTCTTGGTTCATGGTTAGGTATCGTTCGGCGCCGTGAAAAAC CGTCGCTACCCGTCATCAATTGGATATTCTTAACCAAACTTCATGTTAAC TTGATCATTGCTATTCTAGTCGTGTTTGTTATCAACTTTGTGTTTGCTCT CGTTTGCGAAAACACCATGGCCAAGTATTTACGACTCAAACGTTTCCACA CGAGAGACATGTTTTCTTATATCTCTGGACTACTTTTTCAAAGAGACCTG GGTGCTAAGTTACCAGAATTCTGGTCCAGTCGACTACCCTGTATTTGTTA CGCTATTGCCATGACGATCATCATGTCAACATACACTGCTAATCTTACGG CGACGAATATTGTTTACGACGATAGCGATGATTTTCAAGGACTGTCTGAT CCTAAGGTATAAATTGAGGTGTTTTTCAATCTTGTTTCTTGACGTTTAAA TCAACCTCTTAATTTGGGTTTTGAACTTACATTATTCGATAAATTTTTCC TGNTCGGTGGTTTTCATAATGGATCGTGGACGGGGATCGTTCAAGACGTT TATACGGGAAAAGCGGACGTTGGAGTTCACGCAATGACGCAATTACACCA ACGTTTGGACTACGTAGATTACACTGAACCTATTCTTGGTTCATGGTTAG GTATCGTTCGGCGCCGTGAAAAACCGTCGCTACCCGTCATCAATTGGATA TTCTTAACCAAACTTCATGTTAACTTGATCATTGCTATTCTAGTCGTGTT TGTTATCAACTTTGTGTTTGCTCTCGTTTGCGAAAACACCATGGCCAAGT ATTTACGACTCAAACGTTTCCACACGAGAGACATGTTTTCTTATATCTCT GGACTGCTTTTTCAAAGAGACCTGGGTGCTAAGTTACCAGAATTCTGGTC CAGTCGGCTACCATGTATTTGTTACGCTATTGCCATGACGATCATCATGT CAACATACACTGCTAATCTTACGGCGACGAATATTGTTTACGACGATAGC GATGATTTTCAAGGACTGTCTGATCCTAAGGTATAAATTGAGGTGTTTTT CAATCTTGTTTCTTGACGTTTAAATCAACCTCTTAATTTGGGTTTTGAAC TTACATTATTCGATAAATTTTTCCTGAAGGTTATAAGTTACTTTATAAAG ATGAAGAACTTTTGTTTCAATAATATAACTGATAAACTCTATTTTTCCCG AGATCAACCGCTACTCTGTGCTTGCTTTTCCCACGTTCTTGCCGGGGATT AGAAAGTTTAATCATCCTACAGTAAAACTGAAAAACTAACAAATTCTCTC TCCCTCTTTCTTAACTTCAGCTGACCAATCCGAGCAGCGAGTTTAAGATC ACAGTGATGGGACAAACAGCATATGAGTTGTGGGCGCGAACTAAACCTCT TCTTTATGAACACATGAAAGACGCGATGGTACCCAATGATTACGTCGGTG TCAAGAACGTCCTATCAGGGTGAGTTGACTTTTTCAGAGAATTTTACGGG TTCTCTGAGTAGAGGGTGTATAGATAGGATAAGAATTTCTGTTTTTGAAA TATTGGATGGCCTGTGTGCTTTCCGCTTCTGTACAGGGAAGCTCTTCTAA GTGTATTTAAATACACCCCGTGTCACATACCCGGTGGGACCCCGCCCCAC TGAAAGATTCGACCAAAATTCCGTCCCCGGAAGGAAAAAACCTGAAAATC AGTGGAATAAATTGCACTCCTCAACCATCCCCACCTGATTTTTAGCTGTG AATAATAGAATTTCTATCCACATTGTGTTTTCGATGGAAATTTTTACTGT TGGAAAAAGTTTCACTAGGGCTGTGAGACAGGGCTGTTTAGATTGAAATT GGAACTGTTGGGAATCGTTTGATAAAAAAATGCTGATTTGGTTTTGATTA TTGTTTTTTCGTCCTTTATCAGATCATTGGATGGTTATATTGGAGATTAC AAATTCTTGAAATATCTCTCACAACTCCCACAATTCTGCCATAAACTAAG ACTTTACAAAGAGAAACGGAAATCCATATTCAGTGCTTTCATTGTACCGA AGAACTCGCCCTGGAAAGAGCCATTCTCGCAGGAAATCCTGAACACTTTT GAGACGGGCAAAATGGCGGAACTGCTAGATCGTTGGTTGTGGTACACAGC TTGTGAACAAACGGAGAACGACGTCAGTTCTTTCACGTGGCGATATTTCG GTGGACTTTTCGTCTTTACCGGAGCTTCTATTGGATTTGTCACTTTGGTT TTGTGTCTGGAATTTCTGGTGAATTGTATTCGTAACGTGTCATGAACATT GTGTGTTCTTTATATCCATGAAAACAACGTGTGTAGCTTGTGAGCCGTCT CTTCTACTTGTTGTTTCCCTGCTTTTCTGGAAATGTAACTTTGGTGATAA CATACTCATCAAGTATTGCGTGTTAAAGACATATGCTAGGACATCGACAT ATATTGTTGAGATGCACATTGTTGAGCAAATCAACAAAATTTTTACCATA GAGATTAAAGACATATGGTTGGTAAACTGCCATCTTTCTCACTGGTATGT GAGCTGAATGAATGACTATAAAAGAAATTTATGTATGAAGTCTTTATAAC TGAGGGGACGATGATATTTAATACTCATTTTTACTATACTACGATTTGTA TTTTTAGACATTTTTAAATTTCGTTATTGTGAAAGTAAACTTTGTGTACC ATGAAAATCGCAGATTATCGCAATTTCATTATGTAAGCATTTTGAGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007945TCONS_00007945Clytia hemisphaericatranscript
TCONS_00007944TCONS_00007944Clytia hemisphaericatranscript
TCONS_00007943TCONS_00007943Clytia hemisphaericatranscript
TCONS_00007942TCONS_00007942Clytia hemisphaericatranscript
TCONS_00007941TCONS_00007941Clytia hemisphaericatranscript
TCONS_00007940TCONS_00007940Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080supercontigsc0000080:643230..650527 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.69 4.67 3.86 3.18 5.51 4.93 4.15 5.39 4.15 5.08 5 5.03 1.77 2.29 0.3 0.51 0.67 0.99 2.88 3.04 1.6 1.8 1.61 2.03 4.95 5.95 3.58 4.41 1.62 1.6