XLOC_004482 (gene) - C. hemisphaerica

Overview
NameXLOC_004482
Unique NameXLOC_004482
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000080:706129..709534-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004482 ID=XLOC_004482|Name=XLOC_004482|organism=Clytia hemisphaerica|type=gene|length=3406bp|location=Sequence derived from alignment at sc0000080:706129..709534- (Clytia hemisphaerica)
GTTTCAGAGGAAAAACTGAAAAAAAGTATCGATGTAGTAAAACAGAAAAA
AAAATCTCCCCAAGATGTCAGTGTTTCATGACGAGGTAGAAATTGAAGAT
TTCGATTATGATGAAGAATCGGAAACATATTATTATCCCTGCCCGTGTGG
TGACCGCTTCGAGATCACGCGTGAAATGTTGGCGGACGGAGAAGATGTAG
CAACCTGTCCGAGTTGTTCACTCATCATCAAAGTCATTTATGATATTGTA
AGTTTACCCAGAGGAATGTAAAGAGATGGAAAAACAGCTTCTTGAAAACA
ATGGAAAAACGGCTCGTCATAGACCAGGTCTCTTNCTTTCATTTTCTTGA
CAAAGTGACTCTTTTTGATGAAATTATTGACAAGCTACTTAAGGCCCTTA
AAGCTTGGTCCTCACTTATAGAAAAAATCGCGTCTAATCACTAGACGCCC
GCGTCTAACATTAGACGCGCGCGTCGAGTCCTTAGGCGCGTGCGTCGAGA
AATTATGTCTTTGTTGTCCTCACTACCATGAACTTTTTTGAATTAAAGGA
TTAAAATATGGGAAATGTGAATAAATGAAGTTATGAGTTTGAGCTTCTCT
TCAGTTTATGTTTTCTTATTGAGTGATGGAAAGAAGATGGATAGCAGTGA
TGATGAAAGCTACTTTGATAATTGTGAAGATTTGCTCCTTCTACTTTTGT
TACGAAAATGACAAAATAGGAGAAAAGCGCGTCGCAGGCGGTTTTGGGTA
CGAGATATTTTTCAAGAAAGACCAATCCATGGAACGTTTAATACTCTTGT
TTCAAACATTGCTAAAAGACAGTGAAATGTCTCTTCGGTATCAAAGAATG
ACTCAATCTTGCTTTGAGCATCTTCTCTCACTAATTCAACATCGTATCAG
CAAGAAACCCACTCAATGCGTCAGCCAATATCAGTTAGAGAACGTCTCTT
TGTAACATTAAAGTTTCTGGCCACTGGAGAAAGCCAACAATCCCTGTCAG
AGACATCATACCAGATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCCTGTTTGATTCAAAATTGCGAAAAAGTGAAAAAATATATTAGCTTG
ATTTTTTCGAAATCGTTTAGAGGAAGGTTTAACTAAAATTTTGGTATATC
AAACTTTAAAATTGCTTCATTAGATCAAAATNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTACAACTTTGGGG
ACATTTAATTCTGTTTACATTGCGGTGCCTTTGAACGTTAGACGCGCGGA
ACAAAATTTTTTGTTCCACGCGTCTAACAAATTTTGTCAAATTCCAGGCG
TCTAACACTAGACGCCCGCATCTAACACTAGACGCTCGCGTCTAACGAGT
GTACTCACTAGAGGTTCCAAACACTAAGTCGCGCGCGTCTAATGTTAGAC
GAGGGCGTCTAGTGATTAGACGCGATTTTTTCAACAAGTGAGGACCAAGC
TTAAGGGAGTTTAAGTCGAGTAAATAGGTTTCTTTTGTTGTCGCTATAAA
AAATCTGCATAATTAGCGTGTTGTGACAAAATTCTTTTGTTTCAAGCCTG
ATTATGCGCAAACTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGGTACACCTCT
CCTATACGAAAAGGTACCTATATCTTCTTGCTCAGAATTTCCTAGCGATT
CTACTGATATAACCGCATCATGACCGCACTATAATATGGAAAGCTAGAGC
TCGAGAAAATTATAACTTCATCTTGATTTTACTCGACCTCTGACAGTTTT
ACAAGAACTAATTTAATATCATTGCGTTAAGAATTTCTTTTGCTATACAT
TGGTAAAAATATTGCTCCTTATTCTTAAAAATTGAACTAGTAATCGGCAA
AAAAGGAAAAACAAATTTTCATTTATATCGTCAAATCATGTAGAAACCGT
CCGATTTGTATGGCGAGCCGTCTTTTCTGGACTTTCATTTAATGACCTAA
TCAACGTTTTTACAATAGAATTTTAAATAGAAGTGATCGTTGAACTTTGA
GTAATCAGAAAAGCTGTTTTTCCATCTCTTTACATTCCTCTGGTTTACCA
TCTCCATTAAATTTTTTCAAATTACTTCTTACACTCGAATATATTTTGAA
ACCTCCTTTTATTAGAATTTAAGCTCCTCCTTGAATTTGATCTCGACATG
TAAAAGACAGAAATTTTGTATATTTCATAAATTTTCATTGTTTTTTTGCA
CTCTTAAGCTTGGTACTCACTTGTTGAAAAAGTGCCGTTTAACACTAAAC
GCCGGCGTATAACTTTATACGTGCGCGTCTAAAACCATAAGATCTCTAGT
GAGTACACTCAAAAAGATTTCGTTTCACTTTTTCCCTCTTTCTCTATCTC
TCTTTGCTAAAAAGCTCCCAGTGAGTACCATGTGAGTACATAGATGATCT
GAAAAGTTAAATGCGTGCGTCTAGTGTTAAACGCCACTTTTTTCAACAAG
TGAGTACCAAGCTTTACTAAATACACTTTTTCATTAAATTTTCAGGATGA
TTTTATGGAAGGAGAAGAAGTCGAGGCTGTTCTGCCACCCCGCCCTGTTG
AAAAAGCTTGAACGCCCTTCGAATCAACTTCATTACCTTCTAATAAGCAA
ATAATGATTTCATTTGTTATGAATAGATCTGAGCTCAAGTATAAGTGAGG
ATGGGTTTCTCCTGAAATTGATGTCCAAAATTCTAGGTCGAGTGGAAGCT
ATTGCGCTTCTTTGACTCTTTGAATTAAAAGCTATCATTTATTTTTCTAG
AAGTGAATTTCACTTTATTTTATATCAAATTTTATAGTAATTTTATGGTG
CTTTATAGTTTTAACATTTTTATTGTCATACAAGATATCTAAATAAAGCC
AATCGTCATTGCCAACGGCAAAAAACTCGCCCTTTAATAAAGCTGTAGTT
ACCAAGCCAATCATATCTATCATATCGTCATTTAAACTGGTTTTTGATTA
CAATTTTCCTCGAGCATTTTGTTTTTGCAATAGACCATACTTTTTAGTAG
GCTATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007958TCONS_00007958Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080supercontigsc0000080:706129..709534 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.39	4.66	4.76	4.51	24.92	17.9	14.12	15.01	14.65	15.65	15.25	11.84	8.81	10.18	12.4	10.79	21.78	20.73	7.42	11.07	13.12	12.53	20.08	20.28	9.78	10.4	14.71	9.93	17.57	16.3