XLOC_004800 (gene) - C. hemisphaerica

Overview
NameXLOC_004800
Unique NameXLOC_004800
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000086:834447..838321+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004800 ID=XLOC_004800|Name=XLOC_004800|organism=Clytia hemisphaerica|type=gene|length=3875bp|location=Sequence derived from alignment at sc0000086:834447..838321+ (Clytia hemisphaerica)
aaaaaaaattgaaaggggTTCCCTTGTATCTTACATCACAGTTTTGAAAA AGATGGAAGCTCCCAGTTGCTAAGCCCACCAAAACATATCCGTCGACCAT GTGCGAGCGTTTGAGTGGTTTCAGAGTATACCAATTAGTTCGCCATGTCT TTTGGGTTGTTTTGAGTTatagcaaagaataaaatgacgtcataagcgCG GGAAAATACGAAAATTCGCGCCGAATTCGCCACGTGCAGGGGTAGTCAGG CCTTGCATGAATTTCTCTCCCATAAAGAAGGTAATTTGACCATGGAACAT GGTCCAAGTATAAAAGAAGAACAACAAATCAGACATGCCTATTTGCATTC ATAAAGCAGTTACATCTACTATTTACAGGTATGTACATAAATAAAAAGTA CTTTCTATCAATATCAAGATATAAACATATAAACAATAAGAAGCTTAAGT AAAATTTCTAAACACAAGAATGATTCCGTTGAACTTTGGCAAACTTTAAA GTCTTGACTTGTGTATTGTTTACTGCCTTTCAGAATGAATGGAAAGGGAA AGCACACCGGCACCAAAGCACCGCTAAGCTCATTGCAACCCCGACAGCTG CGCACAACGTACCTGATAACCTACAGCCAGGCCGACCTAACCAGATTCCC CGACCGAGAAGACTTTGCACGACTGGTTGTGGGTCTGTTCAACGAGACGG AAGGTGTAGGACGGGTTGATTATTGGGTCTGTGGCAAGGAGGAACACCGA AACACTTCTGGGTATCATTACCATCTCGCCCTGAAGTTGACAGACGGTAT CCGCTTTGATAGTGTCCAAGCCCGCCTGGTCGAGGAAAATGATGTGAAGG TCAATTTTCGAGACGACTATGACCTGTATGTTTATGCACAGCGTTATTGC GTCAAAGAGGACGACGGTGCTGTCTACAGCCCCAACCACCCCCCAGTTGA AAGCATGAAGTCACCCCGAACGAAAAAGGCAGTTGCGCAGAGACGGGCCA ATGCCAGAGCCAGGAGAGAAGCCAGGGAGCAGGATGTCAACGAGCAGGAT GTCAACGAGCAGTCCACAGCTTCTAGTCGGCCAAGAACCAGGTCACAAAC CGCAGCTCAGCGTGAGCCACTCCCACCCAAGGTGCAACGTGTCGGTAAGT TTGAGGTTTCCCGTTTCATTGCTGAGAATGGAATTATCGACGTTGCTCAC TTGTGGGCGGCAGGTCGCGCACGCATGGAGGCTGGGGAGAATGACCTGGC AAAATTTCTAATCGACCGCGAATCCAGGCCCAAAGAGATTTCCTCCCTTT TTGAAGGCAACAGAAAGCTTGATGAGTCGCTCAGTCCTGCTGAACGCCCT CCCCCTCGCAAAAGAATGGAAGTCCTCAGGGAAGTCTTGCGTGGCCATTG CATTGAGGGGTGTGGCGGCCGTTGGTTCACGTGCGCCATTGAGATCTTAG AACACAACAGGATTACGGTCGGCACGTACGCCAAGTCCATGAGGTTGCTC TTTGAAAAGGGAAGGGGCAAGAGAAGAAACATGATGTTGACTGGGCCCAA AGACTCCGGCAAAACCTTTCTGATGGACCCAGTCCGAAAAATATTTAAGA CTTTCTTAAACCCGGCCGACGACAAGTACACATGGCAAGATGCAGAGGAT TGCGAGGCCATGTTCTTTAATGATTTCCGCTGGTCTAAAAATATGATAAG GTGGAATGACTTGCTCGTACTGCTCGAGGGCCACCCTGTCCGCTTTCCCG TTCCCAAAAACCAAAGGGCCAAAGACATTTTGTTTACGCGGGATGTCCCA ATATTTGCAACCAGCCGATCTACTGTCAGGCTTGGAAAGGGCGGTGGATC CTACAATGACGACGTTGAGGAGGACGACAACAACGAGGGAGATGATGCTG TGAGCAGAGAGAATGGGATGATGAAAGTCCGATGGGTTGTTTACAATTTG CCATTCACCATCCGTAACATCGTTGAGCTGGAAGCGTGCCCAAGATGCTA CGCAAACTTAGTGTTTTACGGTGATGCCACCGTGTAATTTTGTATAGTAT TTATTAGTATTTATTCCGTCGTCATTGTAAGATACTTGATAAAACCCTTC ACCGACCTAATCTCATGTGTACGCTTATAATTCTTTGCAAAGACTATTTC ATAATATGCCCGATTTAAATTCCacgacactttgaaaatcttaattAAAA AAGCTGACAGTATTTTTTCATAATATCCCTGATTCTAATAATACAGTCTA AAGAATGTTTTCCAGCTTCTCCGGCTACTTTGCGGTCCAAAGTCTACATT AATCCACAATTAACCACAGTTAACCGAGGGCTGCTCTTTAAAAGAAACTT TAGATAATATTAATGTTCTTTATGAAAAAGGAGGAGGTTAACTGTGGTTA ACTGTGGTTAACTGTGGTTAACTGTGAgtattatttgaaaaatatcaaga aagaGCAACACAAGAGCATATGTAGCCAAAATCAATATCTCAGCCTGCCA CCACgcctttttataattttgtccAACCGTTTCGGCATACTACCAATAAT TCGGTCAATCATTCCAGCGTCAAAGTTCTCAATGGTTGCCTTCACCCGGG CACTGAATTCGTTGAAACTTTCCTTAGTAATTCTGTTATCCAATGCATCC TGCGAAAGTTTTCGACTGACCAAGTTAAAAAAGTTCTCAATGGGATTAAG GTCTGGACTGCGCGGTGGAATGGAGAACACTTCGGCTCCAATGTCCTTGA TTGCCTTCTTAGCCTTGGCAGAATTTTGAACAGGACAACCGTCCTGTAAG AAAGCCTTACCCCGGATGTGTCGAGTAGATTGATAGATTGCAGGGAATTC CTCACGCACCATTTTAGCGAAGCTGTCACCGTTCCATCTGTTGTGGTACT GGCGACAAAATACCACACCACGGTTCGGACAAATTGCCACCATGAAATTG GACATGCGGCCCCCTGTACCTGCGCGTTTACCTTTCGTCGTGCACTGGCC ACTCAATCCTTCGGCTCTTCGACGCCAGGCCATAGTTTTGGTGGAGCGGG CCTCATCATGTGGGTTGGTCTTGTGTGTGAACCCGGTACCATCCAAATAG AAATTAATATGCTTCATCCAAAAGTTCTTTGGCAGTTTCCGGGCATTCCG GGCAAATGCCAAACGTTTATGCAAGTCTGTGTTTTTCATAATCCCTTTAC GACGGGAGTGAAGATATCTGTAGCCATGTCTTCGCATAACTCTACCAACA GTGGCCATGGAAACTGTCTGGTCAATTCCGGCCTCCACAGCAAGTCTGCG CAAAGTAAATGGGCCGATCGTGCTTCTCATACGTTTGATGTGGCGAATAA GGTTTCTCTCGTCACGCGGGGTGAGTCTCCTTGGACGTCCAGGATTTAGT TTTCGTTTATCGTGTGGTCGGTTGAGCGGCCTCTTCACATGTCTAAAAAC GGTTGCACGGCTGTATTTTGGAAACTTCTTCATGATACGGCTGACCGGCA TCTTCAACTCCACATACAGGAATCTCATGTACAGGGAATCAGCGATGGAG ACTTTGCTCTGTTTTCTGCGCATGCCATCCATTTGTCGTTCAGTGATCAA TTGattaagtaagtaagtagtttttcttttatttcatttattttttctgt aaTGAGAAATATGTATATATGTAATAAACAATTGAACAAGATATTGAGGT AAAATAAAGGCGGCCGGGTCACTTCGTGTTAATTAATGATGTCGGTTAAT CGCCTGCGTTTTTGTTTTTACTACGTTACAGTTTGGTCCATACTTTCGCC TTTTACGAAACACCTGGCCGGGTGACAATGGTATTCTCAAAACGCCCCCA CTGTAGGGCGAGGCCacgtgcaaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008581TCONS_00008581Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086supercontigsc0000086:834447..838321 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.21 4.82 1.49 0.83 43.24 34.47 20.73 21.35 6.16 16.66 11.23 16.81 9.87 9.22 8.03 10.38 8.74 6.65 11.96 9.94 5.19 6.07 6.49 7.59 14.54 22.3 3.68 4.99 1.52 1.58