XLOC_004804 (gene) - C. hemisphaerica

Overview
NameXLOC_004804
Unique NameXLOC_004804
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000086:892776..902965+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004804 ID=XLOC_004804|Name=XLOC_004804|organism=Clytia hemisphaerica|type=gene|length=10190bp|location=Sequence derived from alignment at sc0000086:892776..902965+ (Clytia hemisphaerica)
AGGTCTACAAGATAGACGTTATGTCCCAAACATCACACTGGTTTGTCTTT AAACGATACAAAGAGTTTTATAACTTACATCAAAAGGTAACAGGTTCATT GATCAATTGcaataaagatttgaaaacactgATCATaatctttgcaaatt ttttattgattggtacagtttttcatttcatctgttttcgattttttctc AGTAATTTCATTACTGTCAATATATCTTTGATTATCGTCCACCTCTAGGC AAAACGCactgtcgaatatttttagatatccgatagctaaatatctcttc tgtagcataaaaaaaacagaaaaaaatagtCTTTTGATCAAATAATTATT CAAATGTCACATatataaaaacagataaaagaaagctcattttattaaca aaagagaaaggaaattcgaacgttttgtaattaaaagagaaaaaaacaat gaaattgacatcCTTAAATAAGAaagtaaaacgttcgaaaaatGTCATAA AGAGGGAAGGACTGAATGAAAtagtgaaaaattaaaatgcgTTTCTGCTA ATTGGTGAATGATaaaccaacgatgtaaaaataatagataaccaactacc tctagaaggcacttctcccaagagaccaaccattgttttcctattgaaat gagcactcctttaaatagctctgtgtgcagtgcgtgttatgcttttagct agattttgacacactttttgacatcNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaattgact acggatcggcctgataacacttaatcttcatctggataaataaacgctca tacaatgatgttatctgaaaaatatatgtgtgatttgaagtgcgatatct cacgaatgaaaagtgcatgaaggttgcctgatacaaaataaacagatgac tgtttatagaacaataatatctaattaaaagattccttctgtgaggctgc ctataggaaaatacactttttctaacccaaattttggaaaaaaatacatc acgtgatcgattctgtccaatagaaggttgcaaatgaagcaagtttttat ttaattgcactttttacgatgcaaaatgtcattaatatttttacaaccgt aacacggatgttttttgagaatcaaggcaagttggttatctattattttt acatcgttggataaaccatatattcaactcgctttaatgatattcatatc atcaagctcgactgaataattttcgatatccgatttttcttgttgaatat ctgcttatagttttgcagattttaaaagttataacAGAAAAGTGTTATTT TAAtttattctgattttttttcgcAAATCACTACCCATTCCATTATGCTG TTTTATTATACACAGATCTGattaaattttacttttgaaactaATTTCAA TCATTATTTTAGTTGATCAAGCAGTACAAAATCCCAAAAGATCTTTTACC GCCTcgaaaaataacaaataatATGGCAAAAGAGACATTGGAAAATCGAA GAGAAGCTTTGGAGCACTATCTACAAAAGCTGCTTAACAGGTATTTTGCA CTCTTTCAGGGCAactggaaaaaaattgaaaaagtagttcTTAAGTTGTA TGAAACAAACTTCaatatgatgaaaataagaataagAAAGAAAGCTTTTT TTATCCCAGGAAAACTGTCATCTTAACTGAGAAagagagtttttttttaa taaacctAGAATTTCGTTTTGATAGttatttctaatcaactgatgaatgc gtaagCTAGAAACTTAATAAAGTATTGAGAAGAATATACaccgtttctta atctttatgtaaCAAGCTCTACTCAAGTATTGAGCACTCTTAATTGTGCA GAGAAACACAAGAAGAGAAGGAGGGGCGCATATCTCTCTggaatttggaa aatataagcCTTGCCAAATATCAATTTGAACCCTCAGGTatttaatcttt gttttttaagtgtagaatatttttcataaaattcccttctttttttttaa gctgTAATACTGGAGTAAGAAGGTCTGaagatttggctgaatttttagat GTCAAATCTCATGTGAGTAATTACGTTATGACTTAATCAATGTgacattc aaaatattgttattaAATCAaatttggacctaccccgggggaggtcctat aaattaacctttgtccgttcgttcgttcgttagttaccagcttttctcga gattggctcattagttttttcttattttttgcacaatgatgcataacaat aaaccctcgaatgtgacagatcccgattttcgaaaaaacaattttttggg caaatttgggccaaaaaacggctaaaaaacaggttttttggactttgtga aacatgatctttgtaaaaaaagaatttttcagctcaaaaaatctatatct ataagaatcactaataataaacacacatcaatgttcttagccaaattaat caattttttgatgagatagatgtttttttttgctcacgaagtcttgaata tgaaagaatatttcaagagcatgaaattttggtttctaaacgtttttttt tataaaaaacaaacgaCTCATTTTAAttgatcgtcactatttgtgttctg aatgattgtttaatggtcacgcttatgtagatatcaattataaatgtgtt aaatgcataaccaggtaggtccataaaagtcgTTAATTTGCTatttagat aaaaatattttgggctTACTCTCAGGTACATGGTAGAGGGAGATGGTAAT AAGTGGGCTGGGTGGAAAACTAATCTCAGAGCTTGATGAGAAAACAGGCA GAATAACAACCTCTTAGTCAGAACAATTTGAAAATCTAAAGGAATTGAGG TAAAGAgtcgacttttgaaaataaaagagttAGTGACATTATTTAGTCAA CTATAGTCTTGATTTCAGGATGTTCCTCATGTTACACATGATTTGACAAG ATACATATGCAAGCATGGTATGCGAGGGTTTGTTGATTACAAGGATACAA GTTATTTTCATTATTCGCTTTAATGTGTACTGTAATGTAATTGGCTGAAA TTATTTGTTTTCGAAGGAAGATGTTTTCCCTCTTACATAGACCTGCCATA CTAAgcgaatttcagattttttcgaATTAGTCTCTAAGGTGTTTCTAATC AAAGATTTTATCCTGTTGATTTCATGAACTTTTCAGGGCAAAGTATTCTA CTATCCAAAGAAATGTTTCGTATGTCTCCAAGCCAACTATATTGCATCAC CAAGCAGCTACAGTTACCACATCCTTCTGGCAGTAAGTTGAACgcaattt ttttgttaaaattagtCAATCTACGATTGAACGGAACACGTGGGTTTTAG CATTTCATAAGCCTCTTTTCTCGACAACAGTATACCACTCTAAAACAAGG AAAAGCGAATACTTATTTGAAAACCTTACttgatttcatttcttttccTG ATTTCCTTTAGGAAATAGCGTAGACCTTGGCTATCTGTATGAGTTTGTGA GCGAATTAAAACGACTAAGTATCACAGATTTTATCTCCCAAATGAGCAAT GGAGAACAACATGAAATatctttcactttcgatttgtCAATTTTCACAAA GTTACAGGAGTTGCAGGTGAGCTTTACAATTAAATAACCATAACGACTTT GAAtggaaaaatgttcaaaaagttGGTCCATTTTCGGCTATTTTCGGGAT ACTTTGGAGGTCTATAACTTTTAGTTTGTTATGAAATAAACATAGGAATA CTCATTTAAAATCAGAAAACTTCAAAGTCTCAGAGAAAGTGTATTCTCAC GGCTTTTGGTCCAAtagaaaacattttcatttgttgctttaatcattttt cgtcttcattttttgaaattcgaaaTCATTTTAAAGATTAAAAGAAAAAG CCTTTAAATAATCCGATTGAACTTATCTTTCATACAAGTAATTACTTAAT TTTGTTAAATCTCTCAATTTTTTCGAAGCAGACTTGAATAATATTGACAA CAATAATTCCCTGTCTTATATTTTGGATTCAGGTTGACTTTTGGTACACC GAAACTTTTTGAAACGCTTATTaggattttgagacttttttgaaacaaCC TCGCTAAGACCATGTCATAATCATCCAAAATGGCTTAAAATGAACCCTTT TTGTCAATGGATGGTTTTGCTATATTTGCTTCAAACTCACCGACgtaatt tttgatttcattgattGAAAAGCCATaattaacaaacttttttaaaattt tattagatGGACGCAATCAATGTGGAATCTTTGAAAGGTGTCCAAAGTTT GAATTCCAAGTTAGTCAAATTGACTGCACGACATTGTATCAATTCAATGA AGGTAATTAGAATCTTGTTTAAAAGGTTTCAAGTTCTCCTCTTCAGgttt tatctgattatttttctCTCTACTCTACGTATTATCTTGTGAATCCGTCT CATAGAAAATTAATCAATTTGAAcgatacccctgtctcagtgacctcaca attttcgaaaaagaacaATTTCTTGTTTACAATTTATTGTGGCAATGTCA AAAAATGCACCACTGGGTCTGTGTATAGTAAGTTCGCCTCTGTAatgata tatttcaattttgtttttagtCCATACTTATTGATGCTGCTATCGAAAAG CGAAATGTAAGTGATTGGTTAATTGATATATGTGGTAGGAGTCTTTATTA TTGAGCATCAGTCTAAAATTATGTGACTAAATTAATTAAATAATTCTAGA ATATAAGGGAATAAGGttagacttttttatttttccgaaCACTTGCAGAG ATTTGAATGCTCAAATGAGAttggtaaaaattgaaaaattacgaacaatt tttaaattttcagtccTGTTCAGTgtcattttcaaacttttctatgttCT TTAGGCACCTCAAGTTAGCCATCCTGGTGAAAATTGGAGGATTCAAGCTG CCTATCGATTAGCTGAAAACAGGTTCAGTATGAACTTATGAACTTATTAA ACTATTAACTCATATTGTTTTGAACTGTCCAGCTTTCGATGACGATATAG AAattgaatttatatttttcttttgtgaaagaattttttttttacctgaA TATTAAAGGTTGtcagtttttcttgatttttaggATAATTTTTCAACCGT GGCACACCTTAACGCACATCAATTTCAGTCATAATAACATCATATCATTT GATTCATCAATGTCTCTACTGCCAGCTCTTCGAcaggtttgttttttctt tttgtcaatGTTATACAGTATTGGGCTATTGGACCCCCCCtagacattca aaattaccctgaAACAGCataattacccccaaacagagcaaatttaccct cAGACAAGGCAGATCTTGTAgattttcactacccccggtcactatatcct ccaccccctatgTACGGACATTTTGTGGATTAGCCTATTCTAACAAGTTA TAATAAACAAGTTAAAGTTTATACATTGCGTTTAATTAATGCTGAAGTTA GTCATTGTTTTAAGAAACAAGCTTTTAGTCGTTGAAATTCCGAAAACTAA AATGCATTATTGATTTCATTTCTTCTAATTAAATGATTAATCTTTTACAT CAGCTTGATCTCAGTCACAACAAGTTGACCCATCTGGACTTGGATTTGGT CACGGCACCTATATTGCACAGTTTGTCGCTTTCAAACAACTCCATTTATC TCATCTCAGGATCAACCAAGGTATTTATGCTTATATACACATTGTTGGGA AAAGGAAGCCCCTCCCCCAATCTACCAATTTAGATCAATTCCCATACTCT AGATTCTTCTCCCGTTTCAAAATCTGATTTAACTACTGTAGACATCAGAT GTCTCCTTTTTTACTACCCAAATTAACCTTAATTATAGTTTATTAGCCTT TTGATGACCTATTGCCATTTTGAGGACTGCAAACGATTCGTGGGTAGCTC GTTTTTTTAAAACGTTTCGTTTTTTCACTTTTAGACGATTGATAATCTAC GTCATTTGAATCTGAGCCACAATAAAGTTAACTGCTTAGAAGGTACGTTT TTGTTTCCCTTATGTCAACAACTAAATCTAAAAGGTTTTACTCGTCGGTC CACTGTTATTTGTATGTGAGTGGCCCGGCTAAAACTAATCACTTGATCAT ATTAAAAGCTTCTCTTCGATGAGAAGTCTCCAGTGGTTTAATTAAGGGGG TGAATTTCGAAAAAACCGTAATGCGATAAGGGAAATAACGGATGTATATG TTTTTTGGTTAAACTCTTCATTCTGAAAAGGTAATTGCAAAACCTATCAT TTATACCGAGCCGTGATACGTTATATTCTCTCTTTTTCTAGGGCTTTTCT GCTGCCAAGGGCTTGAAGAATTGAACCTGACATACAACAATATCGCTGCT ATTAACGAAGTCACAAAACTCTCTTCACTATCAAGACTGTCGAATTTATT GGTTGAAGGTATTATTACCCTATATAAAACAATCTCATATAGTTTCTGCG TTCTTCTATAAAAAAATACATAAGAAGGGTAAAAATACATTTTTCAGTAG TTAACCCCCCCCCCCAGCCATGGAGATTCTGACTGCTTGGACAAGATTTC ATCCCGAATAACTAGCTTGACCCCTCCCCCGAACAATTTGTATTTGCCCC TTAAAGGTGAAAGCTTGCCTCCCGGACAACACATCCTCCACCCCTTTGTA CAAACCTTTCTGGAAGAGATCCATACCGAATCTTACTACGGAAATTATAA GTTATAAATTATAAGAGTTTTGGAGCCATTGTAATACTTTTATCTCTGAC ATTTTTCTactttaaaatgcattttattatatttaggAAATCactttgca aagaaaaaaagacatcGGATCATCATATTTGCATATTTTCGTGAACGACA GGTATAGTAGATAAAACAGAAGTCTCAAAATTTTGAGTCTTCACACAGTA TACgggttaaatttttttatctctATTACAGCTTTTAGCTTTTGGAAAAT GATTGTCGTAGAAAAACTTTCGATgacagttttaaaatttttcagaagaa atggaaaatggaaatatcaaaaagtatcattgattatccctttaattttt ttaatcatactTTTGAGTGATATTTTATCTATCGTTATGATTCTTCTTTT TAGTTGCTTCTTGATAAAAGGCCAATCACTCAGAAAGAAATGGTAAGTTG GTGTAGCGTTTAGAAAATCTTATTAGGTCTAGCTTAGAGAAGAGGATTAA ATTTTGTTTCAGTTCACTAAAGCTTTTGTTTTGTTCAGCGACAgttgaaa taaacaaaataatatcTTATATCTGgtattaaaaatttttattttcacag tgtttcaatttgaatttttttttcaccaaCAGGCCAAACTGAACTCCAAG TTAGCTGCTTTACAACGCTTCGAGGATATTGACGATAGTCTGAGTAACAT CAGTACTGTATCGGATGACAGTGAGCCCGATTCGGGTTATGATCACTCTA ACTGGGTTTCCAAATTAGCTGCTTTATCCGAAATCGAGGAATCCGATTAT GAAGTTGTTCCCCGATTAAATTGGCCGGAAATTTGTAATANCCCCCCCCC CCAGCCATGGAGATTCTGACTGCTTGGACAAGATTTCATCCCGAATAACT AGCTTGACCCCTCCCCCGAACAATTTGTATTTGCCCCTTAAAGGTGAAAG CTTGCCTCCCGGACAACACATCCTCCACCCCTTTGTACAAACCTTTCTGG AAGAGATCCATACCGAATCTTACTACGGAAATTATAAGTTATAAATTATA AGAGTTTTGGAGCCATTGTAATACTTTTATCTCTGACATTTTTCTacttt aaaatgcattttattatatttaggAAATCactttgcaaagaaaaaaagac atcGGATCATCATATTTGCATATTTTCGTGAACGACAGGTATAGTAGATA AAACAGAAGTCTCAAAATTTTGAGTCTTCACACAGTATACgggttaaatt tttttatctctATTACAGCTTTTAGCTTTTGGAAAATGATTGTCGTAGAA AAACTTTCGATgacagttttaaaatttttcagaagaaatggaaaatggaa atatcaaaaagtatcattgattatccctttaatttttttaatcatactTT TGAGTGATATTTTATCTATCGTTATGATTCTTCTTTTTAGTTGCTTCTTG ATAAAAGGCCAATCACTCAGAAAGAAATGGTAAGTTGGTGTAGCGTTTAG AAAATCTTATTAGGTCTAGCTTAGAGAAGAGGATTAAATTTTGTTTCAGT TCACTAAAGCTTTTGTTTTGTTCAGCGACAgttgaaataaacaaaataat atcTTATATCTGgtattaaaaatttttattttcacagtgtttcaatttga atttttttttcaccaaCAGGCCAAACTGAACTCCAAGTTAGCTGCTTTAC AACGCTTCGAGGATATTGACGATAGTCTGAGTAACATCAGTACTGTATCG GATGACAGTGAGCCCGATTCGGGTTATGATCACTCTAACTGGGTTTCCAA ATTAGCTGCTTTATCCGAAATCGAGGAATCCGATTATGAAGTTGTTCCCC GATTAAATTGGCCGGAAATTTGTAATAGCGGGAGTAATCCGGTAGCTGTT CCGGACGATAACACTGATGTTGAAAGTATTTCGAATCCGAACGAGATGAT ATCTAGAGAGGAATGGGATCGAATCTTGCAAGTAGAACCCAAACCCCTTG ATTTATCTCTAGTTCAAAATTTGTCACATAGAAGTGATGAGACACTGAAA GCTTCAACAATACGAAAAACAAGTGCAACCTCTAATAATGATAAAACACA ACAACGTAAATTAGCCTCAAGTCGCGCTAGTGAAAATAAAACCAGCCCGG ATAAAGAACGAACTAACAGTTGGCTGTcaaacatttttcgaaaatcttca tCTATTCAAGAACAGTCTTCATGCATTAACCCTATAGAGGAAATTCTTGG TCCCTCAGGAGCGATATCTTCACATTCAGATCAACCTGATGGTAATATAA ATATACAAGGAACATTGTCAACCCTGGGAAATACACCAGGGGCAAAAAAT ACATCAGGTCTTGTTGTGATTCCCGAAGTTGAAGAAACGAAAGCTTCGGA GGTGGATCCTTTGGCAAGAAGTTTTGATGATAACGCTGAATTTGAAAAAG CTGAGGAGTGTGATGAAGGTGAAGAGCAAACTGATGAATAAACGCTGTTT CTGATATCATAGACCATCTAATAATGTTTGGTTGGTGATTGAAAGCTAGT CTACCATTCCCAGCCCCTAGTATGTTTCAGGGATCCATACCATGCCTTAA GTGATTGTTTTCAATAAACTCACTTATATCCGATCCGAAACCACATATTC CCGATACGAAATTGAACTTATTTCTGCCTATTTTCATAATGGTAGTACAC ATCTTAAATGCTCACATTTTCTTTCCTATGAGAGTTTATAGGATTCTCTT CAAAACTTAATTATAGAAGCCTATTTACTGAAAGTCAAACTCAAATCGAT CACCCATTTCTGATTCCCATGAAATTTATTAGTGGAAAAAacctttttga cgtttttgcgatatgtaatagttatcggtctgataactggtttatcggtg acccaaaaaatacactttttttattggaaaaaagcgcagtgcacttttgt agcaaagtgacgttagattgcttccaccgctacaatgcaacaacatcttt tcgtcaatttatattttgtacatgttaaattacaagatatattgtacttt ttttaaccaatcagattgcagatattttttggatcgccgataaagtTCCA GTTAATGAATaccgtacatgttttttttttataagtgtatgccccttggt caggctcgtgtatgccttctcaaagcatccaggcatagttggTCAGCCtc ggtgacccttcaaatcggttccgcgatttttttcccgctg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008586TCONS_00008586Clytia hemisphaericatranscript
TCONS_00008587TCONS_00008587Clytia hemisphaericatranscript
TCONS_00008588TCONS_00008588Clytia hemisphaericatranscript
TCONS_00008589TCONS_00008589Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008587-proteinTCONS_00008587-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086supercontigsc0000086:892776..902965 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.13 4.41 2.25 1.79 10.89 7.35 8.98 9.08 6.03 10.18 7.7 3.74 5.87 5.94 6.88 8.15 8.58 9.95 5.61 7.49 9.91 9.17 7.66 10.05 13.2 7.17 5.06 3.84 6.67 7.68