XLOC_004829 (gene) - C. hemisphaerica

Overview
NameXLOC_004829
Unique NameXLOC_004829
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000086:575997..581583-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004829 ID=XLOC_004829|Name=XLOC_004829|organism=Clytia hemisphaerica|type=gene|length=5587bp|location=Sequence derived from alignment at sc0000086:575997..581583- (Clytia hemisphaerica)
TTTGAAAAATTTAGTTTGAACCAATCAGATTTGAGAACGTTTAGCGGCAG CCAATCAACTTTGAGTATTTGTTTTGTTTCGAATGTGTTTTAGTTGTTCG AAATTAACGGTTAAAAAACCTCCTATGCGGCATTCTAACAAACTTAGGTC GTGTTGCAGTTTTCACTTTCCGACTGCTGTCGTGTAGATATAGTGTTCTA GCAATAATCGAAATTTTGAAAGATGCGTTGTTGATTCAATACTTGGATTT GATTATTGGCTTTCGTCCTGGAACATTTTGATTTTATTGACGCATTATTG ATTATTGGTTCCATGGTTTGAAATATGGTGATAATGCGAGTTTGATTTAA GTAATAGTTTTTGGCTGCAATATCGGTAAAAAAAGGAGACTATATTTGGA TAGATATTGAATGTAAAATTGACGTTATTTGATAATCTACACTGATCCAC TAATCGACACTTTATCGAGACTTTACGCGTAGGAGCGATGATGATTAGTG GTTGTAAAACTTGTATACAAATGAGGACATTAGTTTTCACATTGATTTGT TTGATTAATTTTTGTTTGGGAGATTTTCAAGATGTGAAGAAGCCACCACA CCCTCATATTATATTTGTCACGTTAAGGGATATGGTATGTAATGTTATAG GGTGATTATAAGTGCGTTATAAGATAGTATAAGGAGCCTATTACGGTATA TTTAGAATACTTTCAAAGTTCATCAATTAAGGTTTTGACTGGGAGAAAGC ATTCATCTTTCCTTTTAATGTATTTGGGAACTACACGGACTGTATGTTAG CAAGGTTGAGGAATCATTCTTGATTTTCTCCACAGGAAGTTCAGTAGGCA AAGTCAGGATTTTTAGTTTAGGTAAAGTTTTTCAAAATTCCGTCTAATGA TCAACTCTGAAAAAAATGATTGGGAGGGTTTTTGTAAGGTTCTCATCAAT CAAAATTTCTTCATTTTTGAATAGAAGATTTTTTTTTCAATCAAGATCAT ATTTTAAAGATTAAGCAATGCAAAGAGAATTTTTAAAACACAGTTAAGTG CTGCGAAAGAATTGCACGGTAGAAGGATTTCAACCATAAATGCAAATGAG TTTTGCTTCAATCAAAGACAGCGTCGAACAACGTTTAATTATGCTCACAA ACGGTACGCCTCGATGACTTTGTTACCATGGCAACAATCTTTTTCTTCAA AAATCTTTAAAATGGCGCTAAATTAAATAAATCTTTAAATTTCTATATTC AAATTAACAAAATTAATCTAACCTTAAAAATTTTAAGAAAAAGATAATTT CAAAAAAATATTTCCAAAAAAATTAAACGAACTTAAATTATCCTTGAACG ACGGGATTTCTTAACCCTTAGAAGCCAGAATACGTATATATACGTTTTGA AAAGGCCATTTTACCGATAGACAGTCTTTTGGTCATAACTCCTGACCACT TGAGATTCAGAGAAAAAAAATCTGCTATTTTTTGTAGGTGAGAGAAAGGG CTTTCCAACGATACCAAAGTTGATACCTGAATCGTTTGTCCTGGTCGAGA AATTGTCTTTGAAAGAATAATTTTCCAGAAAAAAATGATGAACTTTTTGG CCTTTTTCAGAACAGTTAGCGGCTTTGAAAGGTTAAAAAAGCTCTGTAAA TCTAAAAAATTTATTCTCGATTCTATTCCTAATAATGTCTTGTTAATATT ATTCTATTCCCGCGTAGGGTTGGGACGATGTTAGTTTCCATGGCAACCCG GAGATACCAACGCCGAACATTGATCGTATAGCGAACCATGGTGTTATCTT GCAACAGTATTATACCACACCTTACTGTGAAGATTCTGTAACAGCTTTCA AAACTGGAAAATTACCCATACATTATAGTAAGTTAACTCTGGTAATATGT GTTTTTACAGCATTGTTGGTCAATCTAGTCTGAATTTCAGACCTCTACAA AACTGCAGGTAGCATAGAAACATAGAAGGGGTACAAATCCATTAGTGGAC GCCAGTAGCCTACGACCAATCGGGGAATCTCTGTCCTTCTCAAAGCTGTC TGTTTAACATTTATGACGTCCATTGACACCTTTTGTTTTCTATAAGAACA AAGTATGTAAGAATATAAGGCTTGGTGGCAAACAAATTAAGAACTTTCTA TGATGGAAAATTATCTGGATAGTATAGTCGAGTAAGAGTGCAGATAAAAG ATTTGAGGAAACTTTTCCACAGTAATAATCTTTAAAATGCATGCTCTCCA TTTCAGGACGTCCGAAAACAGCAGAGGAATATAATTCTCGTTCGCAACCT TACGATTTATGGAATTATCTCGATATACAGAGTTACGTCATACGCGAAAT TGGAAATGTAAGCCATATTTTGTCCGTTGGCTTTCTTTAAACAAAGAGAA GTTTCTTATGATCTATTTAGACTAGTAACCCCGTCGTTGTATTTCGATGC ATCTTACGCTTTCATTCAAACCCTCCCACAGCAATTTGTCCTTTTTACGA GAACTTTTATAGAACCCTCCTGTGTTCCTTTGTCTCATGAAAAGAAGACA CTTACTAGTCTATGATCTTTCCTGCCTGCTAAAATAAATTCTCCTTCACG TGCTAATCGCTTGTGGTCATAGGTGTACTTAGTGAATTGGCTAGGTTAAC ACCCTAAGAGCATAGATTTAAAAAGCCCGAAGGGCTAGATGTCGTGCTTT AAGCCATCGCAGGCAAAAAAAGTGAATATCGGAATAAATACTGTTGCTAT TTTTTTCGAAAACCCGCGAAACTTCTGATTGGTCAAGCGCTGAAATTTTC TTGTAATGTCACGTGACCTAGGTAGGATTTCCTACCTAACCACGGCACAC TTTTCAGCGAAAGCTTTACATCTAGCCCTTCGGGCTTTATAAATCTATGC CTAAGAGGCACTTTTTTCTTCACCATATGGTATTGTTAAAACTTCTCGAC GGACTATTCTTATTCGTACTTTCATTGTTTTGGCTTTCTTTTTTTCAGAT CGATTGCGAAGATACAAACGTGCCCTTCTACCCATGGGAGGTCATTCAGA AAGCAGAAGATGTTTTAAAACAACATGATCAGATCTACCCACTGTATTTA CAAGTCAACTTTCCACAGCTTCATGCCGATTATCCAGAACAAGTACCAGA GGAATACAGGGACCGTGCCAAAAATATTCCATTCGAAGCAAGAAAAATCT ATGCTGGTAAGTTAAACAAACATTCTTAAGCTTGCATAGTTTGATGCTGG GTGTTTTAGTAAACGTAAGAATTTGAATTAAGTTGGCTATGTTTTGTGAA CTTAAACTCTTCTTTTTTCAATGCTGAAATGATTGACGGGTTTTCTACAC CGGAAAATGCAATTGAACAAGATTGAAGAGTTTAAAGATTTAATATAAAG CAAGAATGTGTAACGTATAATTTTTATCTTCGTTTTTTATATTCTGCTTC AATATGTTTCCTTTCTATAGGCATGATCATGCAATTAGACAGAGCAGTCG GTCACCTCATTCGCATTCTTTACGACACTGGCATCCTTCACAATGCTATC CTCTTCTTCACCACAATCACTGGAGGTACCAAAGGAAATAACTTCTATAC TTGGCCATCAACATACCCTTTCCGTGGTAGCAACGGAACAGTATGGGAAG GCGGTACCAGAGCGATTGGTTTTGTTTACAGCAACCGGATACAAAGACGA GGTATGAATTCTTCACTGAAGATACGAACTGACTTTCATGATATGGTGAC ATTTACTTTAAATCTGATAGGCATCTTTGTTTTATGTACTCTCGGGTACC TAATAGCCGGGGGGTTGGAATAAGCGGGAGGATTGGAAAAAATCTCAAAA CTTAATAAGCGGGGAGGGGGGGGGCTAGAATAAAAATGTCCTGGGTGGAG GCTAATACTGTAGAATTAGGACAAAAGAGGGGAACTTTCAAAAACATTTT CCAAAAAATTAATTAGCGGCGGGGGGATGGCTATTAGCTACCCGAGAGTA CATGAATTGTTAATGACTTTTTGAATCGGGATATGTTTCAACATATAGAA AACTTTGTTAATCGAAATGTAAAACTTTAGAGATGCCTTGCCTCCAAATC TACCAAAGTTGAAGAATGAATATAATTTAACTCATTCACATCTTTTAGGA CGAGTTTCATACGGACTGATGCATATCACAGATTGGCTTCCGACCATTTT CCGATTAGCGGGCGGTAACCCGGAGCATGTCGTTGAGACAGATGGTATGG ATATTTGGGATTCCATCAATTCCGATGATTACTCACCAAGGTATAAACTT TTTTTTTCGATGTCGCTTTTTTTCTTTCAAAATTCCAAATTTGCTTTTTT TTCTACACTCCGAATTCGAACTCGAACGGAAAGTTTAATTTGTTCGAATT ACAAAAAGATTCGAATTATAGAGTATGTTTTACGAGATTTTCCCTAGACG GGGACTGAAAATTAGTTCGAATTATAGAAAGATTTGAACTACAGAAGTTT GAATCAACGAGAACTCACTGTATCTTATTTTCGGGTAATAACATCGCATA CTGCAATCACTCAGTTAGGAAACTCTGAACGATTTTTTAATCCCCAGTCT GACTTCTGAATATATCACATTCAAGGTCATTCATTATCATTGTTTTAATA GCTTACATTAAAAAATCATATCTTCTAAAATAAATCGGCTGTTAGCTTCT TGACTATTTTGATGATTCTATGTCAAGATTTTGGAATTTTATTAATGTTT TTTTTTATAAATCTTTCTTTACAGAATGGAAATTTTGTACGGAATCTATG GTAACATTTCAGCTGTCAGAGTTGGCGATTTTAAATTAATTCAAGGAGAA AGTTACGTGCCTTTTTCACAACGACCAATGGCGAAAGGAGAAATGAAAAA CTTAGTACGTCCCTATACGATTTGGGACAGTGAATTAGAATGCGCTAATT ATCCGGACGCTATCGGTTGTTGGCCGGACATTGCGCCATGTTTATTTAAC GTTCGTTTTGATCCATGTGAGAATAATAATGTTGCTTATTTCATGCCACA GACTGTCGAGGCTTTAGCGTATAGCCTTAAGAAATATCAAGATGGTGATA TTTATCGGTCACGTAGAGATGTCAGCGAACAATTGGAAGTTGATTCCGAA AAATACCGCGAAATTTTAAAAAGGTTACGGAGGAGTGCGGAAGAGCTAAA CGTTAAAGATATACGGAAATAAGATAGATGACGGGGAGACGGCAGGGTGT TTCTGACAAGGAAGGTCGCGTCACGTGTCGGCGACCTGACAGATACCTAT AGGAGCAAAGCTTCGACGATATTTTTGGAAAGATTTATCGATAAATGGGA AATTCATTTGCCTGGTGGGAAATTGATTGAGAGGAAACAGTCCTTGCCAT GAAAATGAATTTATTAAAACAAGTCCAGTTCAACAACGGAAATGGACGTG GGATTTCAAACCATATTTCATGGAAATTGAAATGGCTCAACTTGTAATAT AAACAGAGATACAATTATTCCAAAGCGTCTACTTCGGCGATGCGTGATAG TAAATTGAATACATGTTTCAATCCACAAAATTATTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008629TCONS_00008629Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086supercontigsc0000086:575997..581583 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.27 0.17 0.19 0.04 8.81 7.25 18.03 18.27 3.13 2.81 9.5 8.69 9.46 7.16 6.92 21.6 15.49 12.63 0.2 0.15 7.27 6.81 4.6 3.79 5.07 6.78 1.1 0.5 0.25 0.37