TCONS_00008629 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008629
Unique NameTCONS_00008629
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2289

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008629 ID=TCONS_00008629|Name=TCONS_00008629|organism=Clytia hemisphaerica|type=transcript|length=2289bp
tttgaaaaatttagtttgaaccaatcagatttGAGAACGTTTAGCGGCAG
CCAATCAACTTTGAGTATTTGTTTTGTTTCGAATGTGTTTTAGTTGTTCG
AAATTAACGGTTAAAAAACCTCCTATGCGGCATTCTAACAAACTTAGGTC
GTGTTGCAGTTTTCACTTTCCGACTGCTGTCGTGTAGATATAGTGTTCTA
GCAATAatcgaaattttgaaagatgCGTTGTTGATTCAATACTTGGATTT
GATTATTGGCTTTCGTCCTGgaacattttgattttattgacgCATTATTG
ATTATTGGTTCCATGGTTTGAAATATGGTGATAATGCGAGTTTGATTTAA
GTAATAGTTTTTGGCTGCAATATCGGTAAAAAAAGGAGACTATATTTGGA
TAGATATTGAATGTAAAATTGACGTTATTTGATAATCTACACTGATCCAC
TAATCGACACTTTATCGAGACTTTACGCGTAGGAGCGATGATGATTAGTG
GTTGTAAAACTTGTATACAAATGAGGACATTAGTTTTCACATTGAtttgt
ttgattaatttttgtttgggaGATTTTCAAGATGTGAAGAAGCCACCACA
CCCTCATATTATATTTGTCACGTTAAGGGATATGGGTTGGGACGATGTTA
GTTTCCATGGCAACCCGGAGATACCAACGCCGAACATTGATCGTATAGCG
AACCATGGTGTTATCTTGCAACAGTATTATACCACACCTTACTGTGAAGA
TTCTGTAACAGCTTTCAAAACTGGAAAATTACCCATACATTATAGACGTC
CGAAAACAGCAGAGGAATATAATTCTCGTTCGCAACCTTACGATTTATGG
AATTATCTCGATATACAGAGTTACGTCATACGCGAAATTGGAAATatcGA
TTGCGAAGATACAAACGTGCCCTTCTACCCATGGGAGGTCATTCAGAAAG
CAGAAGATGTTTTAAAACAACATGATCAGATCTACCCACTGTATTTACAA
GTCAACTTTCCACAGCTTCATGCCGATTATCCAGAACAAGTACCAGAGGA
ATACAGGGACCGTGCCAAAAATATTCCATTCGAAGCAAGAAAAATCTATG
CTGGCATGATCATGCAATTAGACAGAGCAGTCGGTCACCTCATTCGCATT
CTTTACGACACTGGCATCCTTCACAATGCTATCCTCTTCTTCACCACAAT
CACTGGAGGTACCAAAGGAAATAACTTCTATACTTGGCCATCAACATACC
CTTTCCGTGGTAGCAACGGAACAGTATGGGAAGGCGGTACCAGAGCGATT
GGTTTTGTTTACAGCAACCGGATACAAAGACGAGGACGAGTTTCATACGG
ACTGATGCATATCACAGATTGGCTTCCGACCATTTTCCGATTAGCGGGCG
GTAACCCGGAGCATGTCGTTGAGACAGATGGTATGGATATTTGGGATTCC
ATCAATTCCGATGATTACTCACCAAgAATGGAAATTTTGTACGGAATCTA
TGGTAACATTTCAGCTGTCAGAGTTGgcgattttaaattaattcaaGGAG
AAAGTTACGTGCCTTTTTCACAACGACCAATGGCgaaaggagaaatgaaa
aacTTAGTACGTCCCTATACGATTTGGGACAGTGAATTAGAATGCGCTAA
TTATCCGGACGCTATCGGTTGTTGGCCGGACATTGCGCcatgtttattta
acgttcGTTTTGATCCATGTGAGAATAATAATGTTGCTTATTTCATGCCA
CAGACTGTCGAGGCTTTAGCGTATAGCCTTAAGAAATATCAAGATGGTGA
TATTTATCGGTCACGTAGAGATGTCAGCGAACAATTGGAAGTTGATTCCG
AAAAATACCGCGAAATTTTAAAAAGGTTACGGAGGAGTGCGGAAGAGCTA
AACGTTAAAGATATACGGAAATAAGATAGATGACGGGGAGACGGCAGGGT
GTTTCTGACAAGGAAGGTCGCGTCACGTGTCGGCGACCTGACAGATACCT
ATAGGAGCAAAGCTTCGAcgatatttttggaaagatttATCGATAAATGG
GAAATTCATTTGCCTGGTGGGAAATTGATTGAGAGGAAACAGTCCTTGCC
atgaaaatgaatttattaAAACAAGTCCAGTTCAACAACGGAAATGGACG
TGGGATTTCAAACCATATTTCATGGAAATTGAAATGGCTCAACTTGTAAT
ATAAACAGAGATACAATTATTCCAAAGCGTCTACTTCGGCGATGCGTGAT
AGTAAATTGAATACATGTTTCAATCCACAAAATTATTCA
Run BLAST on NCBI

protein sequence of TCONS_00008629-protein

>TCONS_00008629-protein ID=TCONS_00008629-protein|Name=TCONS_00008629-protein|organism=Clytia hemisphaerica|type=polypeptide|length=478bp
MMISGCKTCIQMRTLVFTLICLINFCLGDFQDVKKPPHPHIIFVTLRDMG
WDDVSFHGNPEIPTPNIDRIANHGVILQQYYTTPYCEDSVTAFKTGKLPI
HYRRPKTAEEYNSRSQPYDLWNYLDIQSYVIREIGNIDCEDTNVPFYPWE
VIQKAEDVLKQHDQIYPLYLQVNFPQLHADYPEQVPEEYRDRAKNIPFEA
RKIYAGMIMQLDRAVGHLIRILYDTGILHNAILFFTTITGGTKGNNFYTW
PSTYPFRGSNGTVWEGGTRAIGFVYSNRIQRRGRVSYGLMHITDWLPTIF
RLAGGNPEHVVETDGMDIWDSINSDDYSPRMEILYGIYGNISAVRVGDFK
LIQGESYVPFSQRPMAKGEMKNLVRPYTIWDSELECANYPDAIGCWPDIA
PCLFNVRFDPCENNNVAYFMPQTVEALAYSLKKYQDGDIYRSRRDVSEQL
EVDSEKYREILKRLRRSAEELNVKDIRK
Run BLAST on NCBI

transcript from alignment at sc0000086:575997..581583-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008629 ID=TCONS_00008629|Name=TCONS_00008629|organism=Clytia hemisphaerica|type=transcript|length=5587bp|location=Sequence derived from alignment at sc0000086:575997..581583- (Clytia hemisphaerica)
TTTGAAAAATTTAGTTTGAACCAATCAGATTTGAGAACGTTTAGCGGCAG
CCAATCAACTTTGAGTATTTGTTTTGTTTCGAATGTGTTTTAGTTGTTCG
AAATTAACGGTTAAAAAACCTCCTATGCGGCATTCTAACAAACTTAGGTC
GTGTTGCAGTTTTCACTTTCCGACTGCTGTCGTGTAGATATAGTGTTCTA
GCAATAATCGAAATTTTGAAAGATGCGTTGTTGATTCAATACTTGGATTT
GATTATTGGCTTTCGTCCTGGAACATTTTGATTTTATTGACGCATTATTG
ATTATTGGTTCCATGGTTTGAAATATGGTGATAATGCGAGTTTGATTTAA
GTAATAGTTTTTGGCTGCAATATCGGTAAAAAAAGGAGACTATATTTGGA
TAGATATTGAATGTAAAATTGACGTTATTTGATAATCTACACTGATCCAC
TAATCGACACTTTATCGAGACTTTACGCGTAGGAGCGATGATGATTAGTG
GTTGTAAAACTTGTATACAAATGAGGACATTAGTTTTCACATTGATTTGT
TTGATTAATTTTTGTTTGGGAGATTTTCAAGATGTGAAGAAGCCACCACA
CCCTCATATTATATTTGTCACGTTAAGGGATATGGTATGTAATGTTATAG
GGTGATTATAAGTGCGTTATAAGATAGTATAAGGAGCCTATTACGGTATA
TTTAGAATACTTTCAAAGTTCATCAATTAAGGTTTTGACTGGGAGAAAGC
ATTCATCTTTCCTTTTAATGTATTTGGGAACTACACGGACTGTATGTTAG
CAAGGTTGAGGAATCATTCTTGATTTTCTCCACAGGAAGTTCAGTAGGCA
AAGTCAGGATTTTTAGTTTAGGTAAAGTTTTTCAAAATTCCGTCTAATGA
TCAACTCTGAAAAAAATGATTGGGAGGGTTTTTGTAAGGTTCTCATCAAT
CAAAATTTCTTCATTTTTGAATAGAAGATTTTTTTTTCAATCAAGATCAT
ATTTTAAAGATTAAGCAATGCAAAGAGAATTTTTAAAACACAGTTAAGTG
CTGCGAAAGAATTGCACGGTAGAAGGATTTCAACCATAAATGCAAATGAG
TTTTGCTTCAATCAAAGACAGCGTCGAACAACGTTTAATTATGCTCACAA
ACGGTACGCCTCGATGACTTTGTTACCATGGCAACAATCTTTTTCTTCAA
AAATCTTTAAAATGGCGCTAAATTAAATAAATCTTTAAATTTCTATATTC
AAATTAACAAAATTAATCTAACCTTAAAAATTTTAAGAAAAAGATAATTT
CAAAAAAATATTTCCAAAAAAATTAAACGAACTTAAATTATCCTTGAACG
ACGGGATTTCTTAACCCTTAGAAGCCAGAATACGTATATATACGTTTTGA
AAAGGCCATTTTACCGATAGACAGTCTTTTGGTCATAACTCCTGACCACT
TGAGATTCAGAGAAAAAAAATCTGCTATTTTTTGTAGGTGAGAGAAAGGG
CTTTCCAACGATACCAAAGTTGATACCTGAATCGTTTGTCCTGGTCGAGA
AATTGTCTTTGAAAGAATAATTTTCCAGAAAAAAATGATGAACTTTTTGG
CCTTTTTCAGAACAGTTAGCGGCTTTGAAAGGTTAAAAAAGCTCTGTAAA
TCTAAAAAATTTATTCTCGATTCTATTCCTAATAATGTCTTGTTAATATT
ATTCTATTCCCGCGTAGGGTTGGGACGATGTTAGTTTCCATGGCAACCCG
GAGATACCAACGCCGAACATTGATCGTATAGCGAACCATGGTGTTATCTT
GCAACAGTATTATACCACACCTTACTGTGAAGATTCTGTAACAGCTTTCA
AAACTGGAAAATTACCCATACATTATAGTAAGTTAACTCTGGTAATATGT
GTTTTTACAGCATTGTTGGTCAATCTAGTCTGAATTTCAGACCTCTACAA
AACTGCAGGTAGCATAGAAACATAGAAGGGGTACAAATCCATTAGTGGAC
GCCAGTAGCCTACGACCAATCGGGGAATCTCTGTCCTTCTCAAAGCTGTC
TGTTTAACATTTATGACGTCCATTGACACCTTTTGTTTTCTATAAGAACA
AAGTATGTAAGAATATAAGGCTTGGTGGCAAACAAATTAAGAACTTTCTA
TGATGGAAAATTATCTGGATAGTATAGTCGAGTAAGAGTGCAGATAAAAG
ATTTGAGGAAACTTTTCCACAGTAATAATCTTTAAAATGCATGCTCTCCA
TTTCAGGACGTCCGAAAACAGCAGAGGAATATAATTCTCGTTCGCAACCT
TACGATTTATGGAATTATCTCGATATACAGAGTTACGTCATACGCGAAAT
TGGAAATGTAAGCCATATTTTGTCCGTTGGCTTTCTTTAAACAAAGAGAA
GTTTCTTATGATCTATTTAGACTAGTAACCCCGTCGTTGTATTTCGATGC
ATCTTACGCTTTCATTCAAACCCTCCCACAGCAATTTGTCCTTTTTACGA
GAACTTTTATAGAACCCTCCTGTGTTCCTTTGTCTCATGAAAAGAAGACA
CTTACTAGTCTATGATCTTTCCTGCCTGCTAAAATAAATTCTCCTTCACG
TGCTAATCGCTTGTGGTCATAGGTGTACTTAGTGAATTGGCTAGGTTAAC
ACCCTAAGAGCATAGATTTAAAAAGCCCGAAGGGCTAGATGTCGTGCTTT
AAGCCATCGCAGGCAAAAAAAGTGAATATCGGAATAAATACTGTTGCTAT
TTTTTTCGAAAACCCGCGAAACTTCTGATTGGTCAAGCGCTGAAATTTTC
TTGTAATGTCACGTGACCTAGGTAGGATTTCCTACCTAACCACGGCACAC
TTTTCAGCGAAAGCTTTACATCTAGCCCTTCGGGCTTTATAAATCTATGC
CTAAGAGGCACTTTTTTCTTCACCATATGGTATTGTTAAAACTTCTCGAC
GGACTATTCTTATTCGTACTTTCATTGTTTTGGCTTTCTTTTTTTCAGAT
CGATTGCGAAGATACAAACGTGCCCTTCTACCCATGGGAGGTCATTCAGA
AAGCAGAAGATGTTTTAAAACAACATGATCAGATCTACCCACTGTATTTA
CAAGTCAACTTTCCACAGCTTCATGCCGATTATCCAGAACAAGTACCAGA
GGAATACAGGGACCGTGCCAAAAATATTCCATTCGAAGCAAGAAAAATCT
ATGCTGGTAAGTTAAACAAACATTCTTAAGCTTGCATAGTTTGATGCTGG
GTGTTTTAGTAAACGTAAGAATTTGAATTAAGTTGGCTATGTTTTGTGAA
CTTAAACTCTTCTTTTTTCAATGCTGAAATGATTGACGGGTTTTCTACAC
CGGAAAATGCAATTGAACAAGATTGAAGAGTTTAAAGATTTAATATAAAG
CAAGAATGTGTAACGTATAATTTTTATCTTCGTTTTTTATATTCTGCTTC
AATATGTTTCCTTTCTATAGGCATGATCATGCAATTAGACAGAGCAGTCG
GTCACCTCATTCGCATTCTTTACGACACTGGCATCCTTCACAATGCTATC
CTCTTCTTCACCACAATCACTGGAGGTACCAAAGGAAATAACTTCTATAC
TTGGCCATCAACATACCCTTTCCGTGGTAGCAACGGAACAGTATGGGAAG
GCGGTACCAGAGCGATTGGTTTTGTTTACAGCAACCGGATACAAAGACGA
GGTATGAATTCTTCACTGAAGATACGAACTGACTTTCATGATATGGTGAC
ATTTACTTTAAATCTGATAGGCATCTTTGTTTTATGTACTCTCGGGTACC
TAATAGCCGGGGGGTTGGAATAAGCGGGAGGATTGGAAAAAATCTCAAAA
CTTAATAAGCGGGGAGGGGGGGGGCTAGAATAAAAATGTCCTGGGTGGAG
GCTAATACTGTAGAATTAGGACAAAAGAGGGGAACTTTCAAAAACATTTT
CCAAAAAATTAATTAGCGGCGGGGGGATGGCTATTAGCTACCCGAGAGTA
CATGAATTGTTAATGACTTTTTGAATCGGGATATGTTTCAACATATAGAA
AACTTTGTTAATCGAAATGTAAAACTTTAGAGATGCCTTGCCTCCAAATC
TACCAAAGTTGAAGAATGAATATAATTTAACTCATTCACATCTTTTAGGA
CGAGTTTCATACGGACTGATGCATATCACAGATTGGCTTCCGACCATTTT
CCGATTAGCGGGCGGTAACCCGGAGCATGTCGTTGAGACAGATGGTATGG
ATATTTGGGATTCCATCAATTCCGATGATTACTCACCAAGGTATAAACTT
TTTTTTTCGATGTCGCTTTTTTTCTTTCAAAATTCCAAATTTGCTTTTTT
TTCTACACTCCGAATTCGAACTCGAACGGAAAGTTTAATTTGTTCGAATT
ACAAAAAGATTCGAATTATAGAGTATGTTTTACGAGATTTTCCCTAGACG
GGGACTGAAAATTAGTTCGAATTATAGAAAGATTTGAACTACAGAAGTTT
GAATCAACGAGAACTCACTGTATCTTATTTTCGGGTAATAACATCGCATA
CTGCAATCACTCAGTTAGGAAACTCTGAACGATTTTTTAATCCCCAGTCT
GACTTCTGAATATATCACATTCAAGGTCATTCATTATCATTGTTTTAATA
GCTTACATTAAAAAATCATATCTTCTAAAATAAATCGGCTGTTAGCTTCT
TGACTATTTTGATGATTCTATGTCAAGATTTTGGAATTTTATTAATGTTT
TTTTTTATAAATCTTTCTTTACAGAATGGAAATTTTGTACGGAATCTATG
GTAACATTTCAGCTGTCAGAGTTGGCGATTTTAAATTAATTCAAGGAGAA
AGTTACGTGCCTTTTTCACAACGACCAATGGCGAAAGGAGAAATGAAAAA
CTTAGTACGTCCCTATACGATTTGGGACAGTGAATTAGAATGCGCTAATT
ATCCGGACGCTATCGGTTGTTGGCCGGACATTGCGCCATGTTTATTTAAC
GTTCGTTTTGATCCATGTGAGAATAATAATGTTGCTTATTTCATGCCACA
GACTGTCGAGGCTTTAGCGTATAGCCTTAAGAAATATCAAGATGGTGATA
TTTATCGGTCACGTAGAGATGTCAGCGAACAATTGGAAGTTGATTCCGAA
AAATACCGCGAAATTTTAAAAAGGTTACGGAGGAGTGCGGAAGAGCTAAA
CGTTAAAGATATACGGAAATAAGATAGATGACGGGGAGACGGCAGGGTGT
TTCTGACAAGGAAGGTCGCGTCACGTGTCGGCGACCTGACAGATACCTAT
AGGAGCAAAGCTTCGACGATATTTTTGGAAAGATTTATCGATAAATGGGA
AATTCATTTGCCTGGTGGGAAATTGATTGAGAGGAAACAGTCCTTGCCAT
GAAAATGAATTTATTAAAACAAGTCCAGTTCAACAACGGAAATGGACGTG
GGATTTCAAACCATATTTCATGGAAATTGAAATGGCTCAACTTGTAATAT
AAACAGAGATACAATTATTCCAAAGCGTCTACTTCGGCGATGCGTGATAG
TAAATTGAATACATGTTTCAATCCACAAAATTATTCA

Coding sequence (CDS) from alignment at sc0000086:575997..581583-

>TCONS_00008629 ID=TCONS_00008629|Name=TCONS_00008629|organism=Clytia hemisphaerica|type=CDS|length=1437bp|location=Sequence derived from alignment at sc0000086:575997..581583- (Clytia hemisphaerica)
ATGATGATTAGTGGTTGTAAAACTTGTATACAAATGAGGACATTAGTTTT
CACATTGATTTGTTTGATTAATTTTTGTTTGGGAGATTTTCAAGATGTGA
AGAAGCCACCACACCCTCATATTATATTTGTCACGTTAAGGGATATGGGT
TGGGACGATGTTAGTTTCCATGGCAACCCGGAGATACCAACGCCGAACAT
TGATCGTATAGCGAACCATGGTGTTATCTTGCAACAGTATTATACCACAC
CTTACTGTGAAGATTCTGTAACAGCTTTCAAAACTGGAAAATTACCCATA
CATTATAGACGTCCGAAAACAGCAGAGGAATATAATTCTCGTTCGCAACC
TTACGATTTATGGAATTATCTCGATATACAGAGTTACGTCATACGCGAAA
TTGGAAATATCGATTGCGAAGATACAAACGTGCCCTTCTACCCATGGGAG
GTCATTCAGAAAGCAGAAGATGTTTTAAAACAACATGATCAGATCTACCC
ACTGTATTTACAAGTCAACTTTCCACAGCTTCATGCCGATTATCCAGAAC
AAGTACCAGAGGAATACAGGGACCGTGCCAAAAATATTCCATTCGAAGCA
AGAAAAATCTATGCTGGCATGATCATGCAATTAGACAGAGCAGTCGGTCA
CCTCATTCGCATTCTTTACGACACTGGCATCCTTCACAATGCTATCCTCT
TCTTCACCACAATCACTGGAGGTACCAAAGGAAATAACTTCTATACTTGG
CCATCAACATACCCTTTCCGTGGTAGCAACGGAACAGTATGGGAAGGCGG
TACCAGAGCGATTGGTTTTGTTTACAGCAACCGGATACAAAGACGAGGAC
GAGTTTCATACGGACTGATGCATATCACAGATTGGCTTCCGACCATTTTC
CGATTAGCGGGCGGTAACCCGGAGCATGTCGTTGAGACAGATGGTATGGA
TATTTGGGATTCCATCAATTCCGATGATTACTCACCAAGAATGGAAATTT
TGTACGGAATCTATGGTAACATTTCAGCTGTCAGAGTTGGCGATTTTAAA
TTAATTCAAGGAGAAAGTTACGTGCCTTTTTCACAACGACCAATGGCGAA
AGGAGAAATGAAAAACTTAGTACGTCCCTATACGATTTGGGACAGTGAAT
TAGAATGCGCTAATTATCCGGACGCTATCGGTTGTTGGCCGGACATTGCG
CCATGTTTATTTAACGTTCGTTTTGATCCATGTGAGAATAATAATGTTGC
TTATTTCATGCCACAGACTGTCGAGGCTTTAGCGTATAGCCTTAAGAAAT
ATCAAGATGGTGATATTTATCGGTCACGTAGAGATGTCAGCGAACAATTG
GAAGTTGATTCCGAAAAATACCGCGAAATTTTAAAAAGGTTACGGAGGAG
TGCGGAAGAGCTAAACGTTAAAGATATACGGAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004829XLOC_004829Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008629-proteinTCONS_00008629-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008629-exon-sc0000086-1575043694:580950..581583TCONS_00008629-exon-sc0000086-1575043694:580950..581583Clytia hemisphaericaexon
TCONS_00008629-exon-sc0000086-1575043694:579707..579866TCONS_00008629-exon-sc0000086-1575043694:579707..579866Clytia hemisphaericaexon
TCONS_00008629-exon-sc0000086-1575043694:579227..579327TCONS_00008629-exon-sc0000086-1575043694:579227..579327Clytia hemisphaericaexon
TCONS_00008629-exon-sc0000086-1575043694:578378..578585TCONS_00008629-exon-sc0000086-1575043694:578378..578585Clytia hemisphaericaexon
TCONS_00008629-exon-sc0000086-1575043694:577883..578113TCONS_00008629-exon-sc0000086-1575043694:577883..578113Clytia hemisphaericaexon
TCONS_00008629-exon-sc0000086-1575043694:577294..577435TCONS_00008629-exon-sc0000086-1575043694:577294..577435Clytia hemisphaericaexon
TCONS_00008629-exon-sc0000086-1575043694:575997..576809TCONS_00008629-exon-sc0000086-1575043694:575997..576809Clytia hemisphaericaexon
TCONS_00008629-exon-sc0000086-1510915933:580950..581583TCONS_00008629-exon-sc0000086-1510915933:580950..581583Clytia hemisphaericaexon
TCONS_00008629-exon-sc0000086-1510915933:579707..579866TCONS_00008629-exon-sc0000086-1510915933:579707..579866Clytia hemisphaericaexon
TCONS_00008629-exon-sc0000086-1510915933:579227..579327TCONS_00008629-exon-sc0000086-1510915933:579227..579327Clytia hemisphaericaexon
TCONS_00008629-exon-sc0000086-1510915933:578378..578585TCONS_00008629-exon-sc0000086-1510915933:578378..578585Clytia hemisphaericaexon
TCONS_00008629-exon-sc0000086-1510915933:577883..578113TCONS_00008629-exon-sc0000086-1510915933:577883..578113Clytia hemisphaericaexon
TCONS_00008629-exon-sc0000086-1510915933:577294..577435TCONS_00008629-exon-sc0000086-1510915933:577294..577435Clytia hemisphaericaexon
TCONS_00008629-exon-sc0000086-1510915933:575997..576809TCONS_00008629-exon-sc0000086-1510915933:575997..576809Clytia hemisphaericaexon
TCONS_00008629-exon-sc0000086-1491911889:580950..581583TCONS_00008629-exon-sc0000086-1491911889:580950..581583Clytia hemisphaericaexon
TCONS_00008629-exon-sc0000086-1491911889:579707..579866TCONS_00008629-exon-sc0000086-1491911889:579707..579866Clytia hemisphaericaexon
TCONS_00008629-exon-sc0000086-1491911889:579227..579327TCONS_00008629-exon-sc0000086-1491911889:579227..579327Clytia hemisphaericaexon
TCONS_00008629-exon-sc0000086-1491911889:578378..578585TCONS_00008629-exon-sc0000086-1491911889:578378..578585Clytia hemisphaericaexon
TCONS_00008629-exon-sc0000086-1491911889:577883..578113TCONS_00008629-exon-sc0000086-1491911889:577883..578113Clytia hemisphaericaexon
TCONS_00008629-exon-sc0000086-1491911889:577294..577435TCONS_00008629-exon-sc0000086-1491911889:577294..577435Clytia hemisphaericaexon
TCONS_00008629-exon-sc0000086-1491911889:575997..576809TCONS_00008629-exon-sc0000086-1491911889:575997..576809Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086supercontigsc0000086:575997..581583 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.272906	0.166329	0.193124	0.0377883	8.80969	7.25235	18.0256	18.2714	3.13337	2.81297	9.50435	8.6901	9.46074	7.16264	6.92499	21.5983	15.4932	12.6253	0.199447	0.151787	7.27266	6.80512	4.59584	3.78713	5.07268	6.7827	1.09924	0.499206	0.24611	0.366476
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR017849Alkaline_Pase-like_a/b/a
IPR000917Sulfatase_N
IPR017850Alkaline_phosphatase_core
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0008484sulfuric ester hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0008484 sulfuric ester hydrolase activity
Blast
[Close]
BLAST of TCONS_00008629 vs. Swiss-Prot (Human)
Match: ARSI (Arylsulfatase I OS=Homo sapiens GN=ARSI PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 3.049e-48
Identity = 136/473 (28.75%), Postives = 204/473 (43.13%), Query Frame = 2 
Query:  605 HIIFVTLRDMGWDDVSFHGNPEIPTPNIDRIANHGVILQQYYTTPYCEDSVTAFKTGKLPIH--------------------YRRPKTAEEYNSRSQPYDLWNY-----------LDIQSYVIREIGNID------CEDTNVPFY--------PWEV---------IQKAEDVLKQHDQIYPLYLQVNFPQLHADYPEQVPEEYRDRAKNIPFEARKIYAGMIMQLDRAVGHLIRILYDTGILHNAILFFTTITGGTKGNNFYTWPSTYPFRGSNGTVWEGGTRAIGFVYSNRIQRRGRVSYGLMHITDWLPTIFRLAGGNPEHVVETDGMDIWDSINSDDYSPRMEILYGI--------YGNI------------SAVRVGDFKLIQGE----SYVPFSQRPMAKGEMKNLVRPYTIWDSELECANYPDAIGCWPDIAPCLFNVRFDPCENNNVAYFMPQTVEALAYSLKKY 1789
            HIIF+   D G+ DV +HG+ +I TP +DR+A  GV L+ YY  P C  S +   TG+  IH                       P+  +E    +     W+                +++    GN+D      C+   V  +         W +          Q+A  +L  H    PL+L V F  +H   P Q P EY  R + +   AR+ YA M+  +D AV ++   L   G  +N+++ F++  GG      ++  S +P RG  GT WEGG R +GFV+S  ++R+ R S  LMHITDW PT+  LAGG        DG D+W +I+    SPR EIL+ I        +G++            +A+RVG++KL+ G+     ++P        G   NL R  ++                    A  LFN+  DP E  ++A   P  V  L   L +Y
Sbjct:   48 HIIFILTDDQGYHDVGYHGS-DIETPTLDRLAAKGVKLENYYIQPICTPSRSQLLTGRYQIHTGLQHSIIRPQQPNCLPLDQVTLPQKLQEAGYSTHMVGKWHLGFYRKECLPTRRGFDTFLGSLTGNVDYYTYDNCDGPGVCGFDLHEGENVAWGLSGQYSTMLYAQRASHILASHSPQRPLFLYVAFQAVHT--PLQSPREYLYRYRTMGNVARRKYAAMVTCMDEAVRNITWALKRYGFYNNSVIIFSSDNGGQT----FSGGSNWPLRGRKGTYWEGGVRGLGFVHSPLLKRKQRTSRALMHITDWYPTLVGLAGGTTSAADGLDGYDVWPAISEGRASPRTEILHNIDPLYNHAQHGSLEGGFGIWNTAVQAAIRVGEWKLLTGDPGYGDWIPPQTLATFPGSWWNLERMASV------------------RQAVWLFNISADPYEREDLAGQRPDVVRTLLARLAEY 495
The following BLAST results are available for this feature:
BLAST of TCONS_00008629 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARSI3.049e-4828.75Arylsulfatase I OS=Homo sapiens GN=ARSI PE=1 SV=1[more]
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