|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008629 ID=TCONS_00008629|Name=TCONS_00008629|organism=Clytia hemisphaerica|type=transcript|length=2289bp tttgaaaaatttagtttgaaccaatcagatttGAGAACGTTTAGCGGCAG CCAATCAACTTTGAGTATTTGTTTTGTTTCGAATGTGTTTTAGTTGTTCG AAATTAACGGTTAAAAAACCTCCTATGCGGCATTCTAACAAACTTAGGTC GTGTTGCAGTTTTCACTTTCCGACTGCTGTCGTGTAGATATAGTGTTCTA GCAATAatcgaaattttgaaagatgCGTTGTTGATTCAATACTTGGATTT GATTATTGGCTTTCGTCCTGgaacattttgattttattgacgCATTATTG ATTATTGGTTCCATGGTTTGAAATATGGTGATAATGCGAGTTTGATTTAA GTAATAGTTTTTGGCTGCAATATCGGTAAAAAAAGGAGACTATATTTGGA TAGATATTGAATGTAAAATTGACGTTATTTGATAATCTACACTGATCCAC TAATCGACACTTTATCGAGACTTTACGCGTAGGAGCGATGATGATTAGTG GTTGTAAAACTTGTATACAAATGAGGACATTAGTTTTCACATTGAtttgt ttgattaatttttgtttgggaGATTTTCAAGATGTGAAGAAGCCACCACA CCCTCATATTATATTTGTCACGTTAAGGGATATGGGTTGGGACGATGTTA GTTTCCATGGCAACCCGGAGATACCAACGCCGAACATTGATCGTATAGCG AACCATGGTGTTATCTTGCAACAGTATTATACCACACCTTACTGTGAAGA TTCTGTAACAGCTTTCAAAACTGGAAAATTACCCATACATTATAGACGTC CGAAAACAGCAGAGGAATATAATTCTCGTTCGCAACCTTACGATTTATGG AATTATCTCGATATACAGAGTTACGTCATACGCGAAATTGGAAATatcGA TTGCGAAGATACAAACGTGCCCTTCTACCCATGGGAGGTCATTCAGAAAG CAGAAGATGTTTTAAAACAACATGATCAGATCTACCCACTGTATTTACAA GTCAACTTTCCACAGCTTCATGCCGATTATCCAGAACAAGTACCAGAGGA ATACAGGGACCGTGCCAAAAATATTCCATTCGAAGCAAGAAAAATCTATG CTGGCATGATCATGCAATTAGACAGAGCAGTCGGTCACCTCATTCGCATT CTTTACGACACTGGCATCCTTCACAATGCTATCCTCTTCTTCACCACAAT CACTGGAGGTACCAAAGGAAATAACTTCTATACTTGGCCATCAACATACC CTTTCCGTGGTAGCAACGGAACAGTATGGGAAGGCGGTACCAGAGCGATT GGTTTTGTTTACAGCAACCGGATACAAAGACGAGGACGAGTTTCATACGG ACTGATGCATATCACAGATTGGCTTCCGACCATTTTCCGATTAGCGGGCG GTAACCCGGAGCATGTCGTTGAGACAGATGGTATGGATATTTGGGATTCC ATCAATTCCGATGATTACTCACCAAgAATGGAAATTTTGTACGGAATCTA TGGTAACATTTCAGCTGTCAGAGTTGgcgattttaaattaattcaaGGAG AAAGTTACGTGCCTTTTTCACAACGACCAATGGCgaaaggagaaatgaaa aacTTAGTACGTCCCTATACGATTTGGGACAGTGAATTAGAATGCGCTAA TTATCCGGACGCTATCGGTTGTTGGCCGGACATTGCGCcatgtttattta acgttcGTTTTGATCCATGTGAGAATAATAATGTTGCTTATTTCATGCCA CAGACTGTCGAGGCTTTAGCGTATAGCCTTAAGAAATATCAAGATGGTGA TATTTATCGGTCACGTAGAGATGTCAGCGAACAATTGGAAGTTGATTCCG AAAAATACCGCGAAATTTTAAAAAGGTTACGGAGGAGTGCGGAAGAGCTA AACGTTAAAGATATACGGAAATAAGATAGATGACGGGGAGACGGCAGGGT GTTTCTGACAAGGAAGGTCGCGTCACGTGTCGGCGACCTGACAGATACCT ATAGGAGCAAAGCTTCGAcgatatttttggaaagatttATCGATAAATGG GAAATTCATTTGCCTGGTGGGAAATTGATTGAGAGGAAACAGTCCTTGCC atgaaaatgaatttattaAAACAAGTCCAGTTCAACAACGGAAATGGACG TGGGATTTCAAACCATATTTCATGGAAATTGAAATGGCTCAACTTGTAAT ATAAACAGAGATACAATTATTCCAAAGCGTCTACTTCGGCGATGCGTGAT AGTAAATTGAATACATGTTTCAATCCACAAAATTATTCA Run BLAST on NCBI protein sequence of TCONS_00008629-protein >TCONS_00008629-protein ID=TCONS_00008629-protein|Name=TCONS_00008629-protein|organism=Clytia hemisphaerica|type=polypeptide|length=478bp
MMISGCKTCIQMRTLVFTLICLINFCLGDFQDVKKPPHPHIIFVTLRDMG WDDVSFHGNPEIPTPNIDRIANHGVILQQYYTTPYCEDSVTAFKTGKLPI HYRRPKTAEEYNSRSQPYDLWNYLDIQSYVIREIGNIDCEDTNVPFYPWE VIQKAEDVLKQHDQIYPLYLQVNFPQLHADYPEQVPEEYRDRAKNIPFEA RKIYAGMIMQLDRAVGHLIRILYDTGILHNAILFFTTITGGTKGNNFYTW PSTYPFRGSNGTVWEGGTRAIGFVYSNRIQRRGRVSYGLMHITDWLPTIF RLAGGNPEHVVETDGMDIWDSINSDDYSPRMEILYGIYGNISAVRVGDFK LIQGESYVPFSQRPMAKGEMKNLVRPYTIWDSELECANYPDAIGCWPDIA PCLFNVRFDPCENNNVAYFMPQTVEALAYSLKKYQDGDIYRSRRDVSEQL EVDSEKYREILKRLRRSAEELNVKDIRK Run BLAST on NCBI transcript from alignment at sc0000086:575997..581583- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008629 ID=TCONS_00008629|Name=TCONS_00008629|organism=Clytia hemisphaerica|type=transcript|length=5587bp|location=Sequence derived from alignment at sc0000086:575997..581583- (Clytia hemisphaerica) TTTGAAAAATTTAGTTTGAACCAATCAGATTTGAGAACGTTTAGCGGCAG
CCAATCAACTTTGAGTATTTGTTTTGTTTCGAATGTGTTTTAGTTGTTCG
AAATTAACGGTTAAAAAACCTCCTATGCGGCATTCTAACAAACTTAGGTC
GTGTTGCAGTTTTCACTTTCCGACTGCTGTCGTGTAGATATAGTGTTCTA
GCAATAATCGAAATTTTGAAAGATGCGTTGTTGATTCAATACTTGGATTT
GATTATTGGCTTTCGTCCTGGAACATTTTGATTTTATTGACGCATTATTG
ATTATTGGTTCCATGGTTTGAAATATGGTGATAATGCGAGTTTGATTTAA
GTAATAGTTTTTGGCTGCAATATCGGTAAAAAAAGGAGACTATATTTGGA
TAGATATTGAATGTAAAATTGACGTTATTTGATAATCTACACTGATCCAC
TAATCGACACTTTATCGAGACTTTACGCGTAGGAGCGATGATGATTAGTG
GTTGTAAAACTTGTATACAAATGAGGACATTAGTTTTCACATTGATTTGT
TTGATTAATTTTTGTTTGGGAGATTTTCAAGATGTGAAGAAGCCACCACA
CCCTCATATTATATTTGTCACGTTAAGGGATATGGTATGTAATGTTATAG
GGTGATTATAAGTGCGTTATAAGATAGTATAAGGAGCCTATTACGGTATA
TTTAGAATACTTTCAAAGTTCATCAATTAAGGTTTTGACTGGGAGAAAGC
ATTCATCTTTCCTTTTAATGTATTTGGGAACTACACGGACTGTATGTTAG
CAAGGTTGAGGAATCATTCTTGATTTTCTCCACAGGAAGTTCAGTAGGCA
AAGTCAGGATTTTTAGTTTAGGTAAAGTTTTTCAAAATTCCGTCTAATGA
TCAACTCTGAAAAAAATGATTGGGAGGGTTTTTGTAAGGTTCTCATCAAT
CAAAATTTCTTCATTTTTGAATAGAAGATTTTTTTTTCAATCAAGATCAT
ATTTTAAAGATTAAGCAATGCAAAGAGAATTTTTAAAACACAGTTAAGTG
CTGCGAAAGAATTGCACGGTAGAAGGATTTCAACCATAAATGCAAATGAG
TTTTGCTTCAATCAAAGACAGCGTCGAACAACGTTTAATTATGCTCACAA
ACGGTACGCCTCGATGACTTTGTTACCATGGCAACAATCTTTTTCTTCAA
AAATCTTTAAAATGGCGCTAAATTAAATAAATCTTTAAATTTCTATATTC
AAATTAACAAAATTAATCTAACCTTAAAAATTTTAAGAAAAAGATAATTT
CAAAAAAATATTTCCAAAAAAATTAAACGAACTTAAATTATCCTTGAACG
ACGGGATTTCTTAACCCTTAGAAGCCAGAATACGTATATATACGTTTTGA
AAAGGCCATTTTACCGATAGACAGTCTTTTGGTCATAACTCCTGACCACT
TGAGATTCAGAGAAAAAAAATCTGCTATTTTTTGTAGGTGAGAGAAAGGG
CTTTCCAACGATACCAAAGTTGATACCTGAATCGTTTGTCCTGGTCGAGA
AATTGTCTTTGAAAGAATAATTTTCCAGAAAAAAATGATGAACTTTTTGG
CCTTTTTCAGAACAGTTAGCGGCTTTGAAAGGTTAAAAAAGCTCTGTAAA
TCTAAAAAATTTATTCTCGATTCTATTCCTAATAATGTCTTGTTAATATT
ATTCTATTCCCGCGTAGGGTTGGGACGATGTTAGTTTCCATGGCAACCCG
GAGATACCAACGCCGAACATTGATCGTATAGCGAACCATGGTGTTATCTT
GCAACAGTATTATACCACACCTTACTGTGAAGATTCTGTAACAGCTTTCA
AAACTGGAAAATTACCCATACATTATAGTAAGTTAACTCTGGTAATATGT
GTTTTTACAGCATTGTTGGTCAATCTAGTCTGAATTTCAGACCTCTACAA
AACTGCAGGTAGCATAGAAACATAGAAGGGGTACAAATCCATTAGTGGAC
GCCAGTAGCCTACGACCAATCGGGGAATCTCTGTCCTTCTCAAAGCTGTC
TGTTTAACATTTATGACGTCCATTGACACCTTTTGTTTTCTATAAGAACA
AAGTATGTAAGAATATAAGGCTTGGTGGCAAACAAATTAAGAACTTTCTA
TGATGGAAAATTATCTGGATAGTATAGTCGAGTAAGAGTGCAGATAAAAG
ATTTGAGGAAACTTTTCCACAGTAATAATCTTTAAAATGCATGCTCTCCA
TTTCAGGACGTCCGAAAACAGCAGAGGAATATAATTCTCGTTCGCAACCT
TACGATTTATGGAATTATCTCGATATACAGAGTTACGTCATACGCGAAAT
TGGAAATGTAAGCCATATTTTGTCCGTTGGCTTTCTTTAAACAAAGAGAA
GTTTCTTATGATCTATTTAGACTAGTAACCCCGTCGTTGTATTTCGATGC
ATCTTACGCTTTCATTCAAACCCTCCCACAGCAATTTGTCCTTTTTACGA
GAACTTTTATAGAACCCTCCTGTGTTCCTTTGTCTCATGAAAAGAAGACA
CTTACTAGTCTATGATCTTTCCTGCCTGCTAAAATAAATTCTCCTTCACG
TGCTAATCGCTTGTGGTCATAGGTGTACTTAGTGAATTGGCTAGGTTAAC
ACCCTAAGAGCATAGATTTAAAAAGCCCGAAGGGCTAGATGTCGTGCTTT
AAGCCATCGCAGGCAAAAAAAGTGAATATCGGAATAAATACTGTTGCTAT
TTTTTTCGAAAACCCGCGAAACTTCTGATTGGTCAAGCGCTGAAATTTTC
TTGTAATGTCACGTGACCTAGGTAGGATTTCCTACCTAACCACGGCACAC
TTTTCAGCGAAAGCTTTACATCTAGCCCTTCGGGCTTTATAAATCTATGC
CTAAGAGGCACTTTTTTCTTCACCATATGGTATTGTTAAAACTTCTCGAC
GGACTATTCTTATTCGTACTTTCATTGTTTTGGCTTTCTTTTTTTCAGAT
CGATTGCGAAGATACAAACGTGCCCTTCTACCCATGGGAGGTCATTCAGA
AAGCAGAAGATGTTTTAAAACAACATGATCAGATCTACCCACTGTATTTA
CAAGTCAACTTTCCACAGCTTCATGCCGATTATCCAGAACAAGTACCAGA
GGAATACAGGGACCGTGCCAAAAATATTCCATTCGAAGCAAGAAAAATCT
ATGCTGGTAAGTTAAACAAACATTCTTAAGCTTGCATAGTTTGATGCTGG
GTGTTTTAGTAAACGTAAGAATTTGAATTAAGTTGGCTATGTTTTGTGAA
CTTAAACTCTTCTTTTTTCAATGCTGAAATGATTGACGGGTTTTCTACAC
CGGAAAATGCAATTGAACAAGATTGAAGAGTTTAAAGATTTAATATAAAG
CAAGAATGTGTAACGTATAATTTTTATCTTCGTTTTTTATATTCTGCTTC
AATATGTTTCCTTTCTATAGGCATGATCATGCAATTAGACAGAGCAGTCG
GTCACCTCATTCGCATTCTTTACGACACTGGCATCCTTCACAATGCTATC
CTCTTCTTCACCACAATCACTGGAGGTACCAAAGGAAATAACTTCTATAC
TTGGCCATCAACATACCCTTTCCGTGGTAGCAACGGAACAGTATGGGAAG
GCGGTACCAGAGCGATTGGTTTTGTTTACAGCAACCGGATACAAAGACGA
GGTATGAATTCTTCACTGAAGATACGAACTGACTTTCATGATATGGTGAC
ATTTACTTTAAATCTGATAGGCATCTTTGTTTTATGTACTCTCGGGTACC
TAATAGCCGGGGGGTTGGAATAAGCGGGAGGATTGGAAAAAATCTCAAAA
CTTAATAAGCGGGGAGGGGGGGGGCTAGAATAAAAATGTCCTGGGTGGAG
GCTAATACTGTAGAATTAGGACAAAAGAGGGGAACTTTCAAAAACATTTT
CCAAAAAATTAATTAGCGGCGGGGGGATGGCTATTAGCTACCCGAGAGTA
CATGAATTGTTAATGACTTTTTGAATCGGGATATGTTTCAACATATAGAA
AACTTTGTTAATCGAAATGTAAAACTTTAGAGATGCCTTGCCTCCAAATC
TACCAAAGTTGAAGAATGAATATAATTTAACTCATTCACATCTTTTAGGA
CGAGTTTCATACGGACTGATGCATATCACAGATTGGCTTCCGACCATTTT
CCGATTAGCGGGCGGTAACCCGGAGCATGTCGTTGAGACAGATGGTATGG
ATATTTGGGATTCCATCAATTCCGATGATTACTCACCAAGGTATAAACTT
TTTTTTTCGATGTCGCTTTTTTTCTTTCAAAATTCCAAATTTGCTTTTTT
TTCTACACTCCGAATTCGAACTCGAACGGAAAGTTTAATTTGTTCGAATT
ACAAAAAGATTCGAATTATAGAGTATGTTTTACGAGATTTTCCCTAGACG
GGGACTGAAAATTAGTTCGAATTATAGAAAGATTTGAACTACAGAAGTTT
GAATCAACGAGAACTCACTGTATCTTATTTTCGGGTAATAACATCGCATA
CTGCAATCACTCAGTTAGGAAACTCTGAACGATTTTTTAATCCCCAGTCT
GACTTCTGAATATATCACATTCAAGGTCATTCATTATCATTGTTTTAATA
GCTTACATTAAAAAATCATATCTTCTAAAATAAATCGGCTGTTAGCTTCT
TGACTATTTTGATGATTCTATGTCAAGATTTTGGAATTTTATTAATGTTT
TTTTTTATAAATCTTTCTTTACAGAATGGAAATTTTGTACGGAATCTATG
GTAACATTTCAGCTGTCAGAGTTGGCGATTTTAAATTAATTCAAGGAGAA
AGTTACGTGCCTTTTTCACAACGACCAATGGCGAAAGGAGAAATGAAAAA
CTTAGTACGTCCCTATACGATTTGGGACAGTGAATTAGAATGCGCTAATT
ATCCGGACGCTATCGGTTGTTGGCCGGACATTGCGCCATGTTTATTTAAC
GTTCGTTTTGATCCATGTGAGAATAATAATGTTGCTTATTTCATGCCACA
GACTGTCGAGGCTTTAGCGTATAGCCTTAAGAAATATCAAGATGGTGATA
TTTATCGGTCACGTAGAGATGTCAGCGAACAATTGGAAGTTGATTCCGAA
AAATACCGCGAAATTTTAAAAAGGTTACGGAGGAGTGCGGAAGAGCTAAA
CGTTAAAGATATACGGAAATAAGATAGATGACGGGGAGACGGCAGGGTGT
TTCTGACAAGGAAGGTCGCGTCACGTGTCGGCGACCTGACAGATACCTAT
AGGAGCAAAGCTTCGACGATATTTTTGGAAAGATTTATCGATAAATGGGA
AATTCATTTGCCTGGTGGGAAATTGATTGAGAGGAAACAGTCCTTGCCAT
GAAAATGAATTTATTAAAACAAGTCCAGTTCAACAACGGAAATGGACGTG
GGATTTCAAACCATATTTCATGGAAATTGAAATGGCTCAACTTGTAATAT
AAACAGAGATACAATTATTCCAAAGCGTCTACTTCGGCGATGCGTGATAG
TAAATTGAATACATGTTTCAATCCACAAAATTATTCA Coding sequence (CDS) from alignment at sc0000086:575997..581583- >TCONS_00008629 ID=TCONS_00008629|Name=TCONS_00008629|organism=Clytia hemisphaerica|type=CDS|length=10059bp|location=Sequence derived from alignment at sc0000086:575997..581583- (Clytia hemisphaerica) AATGGAAATTTTGTACGGAATCTATGGTAACATTTCAGCTGTCAGAGTTG GCGATTTTAAATTAATTCAAGGAGAAAGTTACGTGCCTTTTTCACAACGA CCAATGGCGAAAGGAGAAATGAAAAACTTAGTACGTCCCTATACGATTTG GGACAGTGAATTAGAATGCGCTAATTATCCGGACGCTATCGGTTGTTGGC CGGACATTGCGCCATGTTTATTTAACGTTCGTTTTGATCCATGTGAGAAT AATAATGTTGCTTATTTCATGCCACAGACTGTCGAGGCTTTAGCGTATAG CCTTAAGAAATATCAAGATGGTGATATTTATCGGTCACGTAGAGATGTCA GCGAACAATTGGAAGTTGATTCCGAAAAATACCGCGAAATTTTAAAAAGG TTACGGAGGAGTGCGGAAGAGCTAAACGTTAAAGATATACGGAAATAAGA CGAGTTTCATACGGACTGATGCATATCACAGATTGGCTTCCGACCATTTT CCGATTAGCGGGCGGTAACCCGGAGCATGTCGTTGAGACAGATGGTATGG ATATTTGGGATTCCATCAATTCCGATGATTACTCACCAAGGCATGATCAT GCAATTAGACAGAGCAGTCGGTCACCTCATTCGCATTCTTTACGACACTG GCATCCTTCACAATGCTATCCTCTTCTTCACCACAATCACTGGAGGTACC AAAGGAAATAACTTCTATACTTGGCCATCAACATACCCTTTCCGTGGTAG CAACGGAACAGTATGGGAAGGCGGTACCAGAGCGATTGGTTTTGTTTACA GCAACCGGATACAAAGACGAGATCGATTGCGAAGATACAAACGTGCCCTT CTACCCATGGGAGGTCATTCAGAAAGCAGAAGATGTTTTAAAACAACATG ATCAGATCTACCCACTGTATTTACAAGTCAACTTTCCACAGCTTCATGCC GATTATCCAGAACAAGTACCAGAGGAATACAGGGACCGTGCCAAAAATAT TCCATTCGAAGCAAGAAAAATCTATGCTGGACGTCCGAAAACAGCAGAGG AATATAATTCTCGTTCGCAACCTTACGATTTATGGAATTATCTCGATATA CAGAGTTACGTCATACGCGAAATTGGAAATGGTTGGGACGATGTTAGTTT CCATGGCAACCCGGAGATACCAACGCCGAACATTGATCGTATAGCGAACC ATGGTGTTATCTTGCAACAGTATTATACCACACCTTACTGTGAAGATTCT GTAACAGCTTTCAAAACTGGAAAATTACCCATACATTATAATGATGATTA GTGGTTGTAAAACTTGTATACAAATGAGGACATTAGTTTTCACATTGATT TGTTTGATTAATTTTTGTTTGGGAGATTTTCAAGATGTGAAGAAGCCACC ACACCCTCATATTATATTTGTCACGTTAAGGGATATGAATGGAAATTTTG TACGGAATCTATGGTAACATTTCAGCTGTCAGAGTTGGCGATTTTAAATT AATTCAAGGAGAAAGTTACGTGCCTTTTTCACAACGACCAATGGCGAAAG GAGAAATGAAAAACTTAGTACGTCCCTATACGATTTGGGACAGTGAATTA GAATGCGCTAATTATCCGGACGCTATCGGTTGTTGGCCGGACATTGCGCC ATGTTTATTTAACGTTCGTTTTGATCCATGTGAGAATAATAATGTTGCTT ATTTCATGCCACAGACTGTCGAGGCTTTAGCGTATAGCCTTAAGAAATAT CAAGATGGTGATATTTATCGGTCACGTAGAGATGTCAGCGAACAATTGGA AGTTGATTCCGAAAAATACCGCGAAATTTTAAAAAGGTTACGGAGGAGTG CGGAAGAGCTAAACGTTAAAGATATACGGAAATAAGACGAGTTTCATACG GACTGATGCATATCACAGATTGGCTTCCGACCATTTTCCGATTAGCGGGC GGTAACCCGGAGCATGTCGTTGAGACAGATGGTATGGATATTTGGGATTC CATCAATTCCGATGATTACTCACCAAGGCATGATCATGCAATTAGACAGA GCAGTCGGTCACCTCATTCGCATTCTTTACGACACTGGCATCCTTCACAA TGCTATCCTCTTCTTCACCACAATCACTGGAGGTACCAAAGGAAATAACT TCTATACTTGGCCATCAACATACCCTTTCCGTGGTAGCAACGGAACAGTA TGGGAAGGCGGTACCAGAGCGATTGGTTTTGTTTACAGCAACCGGATACA AAGACGAGATCGATTGCGAAGATACAAACGTGCCCTTCTACCCATGGGAG GTCATTCAGAAAGCAGAAGATGTTTTAAAACAACATGATCAGATCTACCC ACTGTATTTACAAGTCAACTTTCCACAGCTTCATGCCGATTATCCAGAAC AAGTACCAGAGGAATACAGGGACCGTGCCAAAAATATTCCATTCGAAGCA AGAAAAATCTATGCTGGACGTCCGAAAACAGCAGAGGAATATAATTCTCG TTCGCAACCTTACGATTTATGGAATTATCTCGATATACAGAGTTACGTCA TACGCGAAATTGGAAATGGTTGGGACGATGTTAGTTTCCATGGCAACCCG GAGATACCAACGCCGAACATTGATCGTATAGCGAACCATGGTGTTATCTT GCAACAGTATTATACCACACCTTACTGTGAAGATTCTGTAACAGCTTTCA AAACTGGAAAATTACCCATACATTATAATGATGATTAGTGGTTGTAAAAC TTGTATACAAATGAGGACATTAGTTTTCACATTGATTTGTTTGATTAATT TTTGTTTGGGAGATTTTCAAGATGTGAAGAAGCCACCACACCCTCATATT ATATTTGTCACGTTAAGGGATATGAATGGAAATTTTGTACGGAATCTATG GTAACATTTCAGCTGTCAGAGTTGGCGATTTTAAATTAATTCAAGGAGAA AGTTACGTGCCTTTTTCACAACGACCAATGGCGAAAGGAGAAATGAAAAA CTTAGTACGTCCCTATACGATTTGGGACAGTGAATTAGAATGCGCTAATT ATCCGGACGCTATCGGTTGTTGGCCGGACATTGCGCCATGTTTATTTAAC GTTCGTTTTGATCCATGTGAGAATAATAATGTTGCTTATTTCATGCCACA GACTGTCGAGGCTTTAGCGTATAGCCTTAAGAAATATCAAGATGGTGATA TTTATCGGTCACGTAGAGATGTCAGCGAACAATTGGAAGTTGATTCCGAA AAATACCGCGAAATTTTAAAAAGGTTACGGAGGAGTGCGGAAGAGCTAAA CGTTAAAGATATACGGAAATAAGACGAGTTTCATACGGACTGATGCATAT CACAGATTGGCTTCCGACCATTTTCCGATTAGCGGGCGGTAACCCGGAGC ATGTCGTTGAGACAGATGGTATGGATATTTGGGATTCCATCAATTCCGAT GATTACTCACCAAGGCATGATCATGCAATTAGACAGAGCAGTCGGTCACC TCATTCGCATTCTTTACGACACTGGCATCCTTCACAATGCTATCCTCTTC TTCACCACAATCACTGGAGGTACCAAAGGAAATAACTTCTATACTTGGCC ATCAACATACCCTTTCCGTGGTAGCAACGGAACAGTATGGGAAGGCGGTA CCAGAGCGATTGGTTTTGTTTACAGCAACCGGATACAAAGACGAGATCGA TTGCGAAGATACAAACGTGCCCTTCTACCCATGGGAGGTCATTCAGAAAG CAGAAGATGTTTTAAAACAACATGATCAGATCTACCCACTGTATTTACAA GTCAACTTTCCACAGCTTCATGCCGATTATCCAGAACAAGTACCAGAGGA ATACAGGGACCGTGCCAAAAATATTCCATTCGAAGCAAGAAAAATCTATG CTGGACGTCCGAAAACAGCAGAGGAATATAATTCTCGTTCGCAACCTTAC GATTTATGGAATTATCTCGATATACAGAGTTACGTCATACGCGAAATTGG AAATGGTTGGGACGATGTTAGTTTCCATGGCAACCCGGAGATACCAACGC CGAACATTGATCGTATAGCGAACCATGGTGTTATCTTGCAACAGTATTAT ACCACACCTTACTGTGAAGATTCTGTAACAGCTTTCAAAACTGGAAAATT ACCCATACATTATAATGATGATTAGTGGTTGTAAAACTTGTATACAAATG AGGACATTAGTTTTCACATTGATTTGTTTGATTAATTTTTGTTTGGGAGA TTTTCAAGATGTGAAGAAGCCACCACACCCTCATATTATATTTGTCACGT TAAGGGATATGAATGGAAATTTTGTACGGAATCTATGGTAACATTTCAGC TGTCAGAGTTGGCGATTTTAAATTAATTCAAGGAGAAAGTTACGTGCCTT TTTCACAACGACCAATGGCGAAAGGAGAAATGAAAAACTTAGTACGTCCC TATACGATTTGGGACAGTGAATTAGAATGCGCTAATTATCCGGACGCTAT CGGTTGTTGGCCGGACATTGCGCCATGTTTATTTAACGTTCGTTTTGATC CATGTGAGAATAATAATGTTGCTTATTTCATGCCACAGACTGTCGAGGCT TTAGCGTATAGCCTTAAGAAATATCAAGATGGTGATATTTATCGGTCACG TAGAGATGTCAGCGAACAATTGGAAGTTGATTCCGAAAAATACCGCGAAA TTTTAAAAAGGTTACGGAGGAGTGCGGAAGAGCTAAACGTTAAAGATATA CGGAAATAAGACGAGTTTCATACGGACTGATGCATATCACAGATTGGCTT CCGACCATTTTCCGATTAGCGGGCGGTAACCCGGAGCATGTCGTTGAGAC AGATGGTATGGATATTTGGGATTCCATCAATTCCGATGATTACTCACCAA GGCATGATCATGCAATTAGACAGAGCAGTCGGTCACCTCATTCGCATTCT TTACGACACTGGCATCCTTCACAATGCTATCCTCTTCTTCACCACAATCA CTGGAGGTACCAAAGGAAATAACTTCTATACTTGGCCATCAACATACCCT TTCCGTGGTAGCAACGGAACAGTATGGGAAGGCGGTACCAGAGCGATTGG TTTTGTTTACAGCAACCGGATACAAAGACGAGATCGATTGCGAAGATACA AACGTGCCCTTCTACCCATGGGAGGTCATTCAGAAAGCAGAAGATGTTTT AAAACAACATGATCAGATCTACCCACTGTATTTACAAGTCAACTTTCCAC AGCTTCATGCCGATTATCCAGAACAAGTACCAGAGGAATACAGGGACCGT GCCAAAAATATTCCATTCGAAGCAAGAAAAATCTATGCTGGACGTCCGAA AACAGCAGAGGAATATAATTCTCGTTCGCAACCTTACGATTTATGGAATT ATCTCGATATACAGAGTTACGTCATACGCGAAATTGGAAATGGTTGGGAC GATGTTAGTTTCCATGGCAACCCGGAGATACCAACGCCGAACATTGATCG TATAGCGAACCATGGTGTTATCTTGCAACAGTATTATACCACACCTTACT GTGAAGATTCTGTAACAGCTTTCAAAACTGGAAAATTACCCATACATTAT AATGATGATTAGTGGTTGTAAAACTTGTATACAAATGAGGACATTAGTTT TCACATTGATTTGTTTGATTAATTTTTGTTTGGGAGATTTTCAAGATGTG AAGAAGCCACCACACCCTCATATTATATTTGTCACGTTAAGGGATATGAA TGGAAATTTTGTACGGAATCTATGGTAACATTTCAGCTGTCAGAGTTGGC GATTTTAAATTAATTCAAGGAGAAAGTTACGTGCCTTTTTCACAACGACC AATGGCGAAAGGAGAAATGAAAAACTTAGTACGTCCCTATACGATTTGGG ACAGTGAATTAGAATGCGCTAATTATCCGGACGCTATCGGTTGTTGGCCG GACATTGCGCCATGTTTATTTAACGTTCGTTTTGATCCATGTGAGAATAA TAATGTTGCTTATTTCATGCCACAGACTGTCGAGGCTTTAGCGTATAGCC TTAAGAAATATCAAGATGGTGATATTTATCGGTCACGTAGAGATGTCAGC GAACAATTGGAAGTTGATTCCGAAAAATACCGCGAAATTTTAAAAAGGTT ACGGAGGAGTGCGGAAGAGCTAAACGTTAAAGATATACGGAAATAAGACG AGTTTCATACGGACTGATGCATATCACAGATTGGCTTCCGACCATTTTCC GATTAGCGGGCGGTAACCCGGAGCATGTCGTTGAGACAGATGGTATGGAT ATTTGGGATTCCATCAATTCCGATGATTACTCACCAAGGCATGATCATGC AATTAGACAGAGCAGTCGGTCACCTCATTCGCATTCTTTACGACACTGGC ATCCTTCACAATGCTATCCTCTTCTTCACCACAATCACTGGAGGTACCAA AGGAAATAACTTCTATACTTGGCCATCAACATACCCTTTCCGTGGTAGCA ACGGAACAGTATGGGAAGGCGGTACCAGAGCGATTGGTTTTGTTTACAGC AACCGGATACAAAGACGAGATCGATTGCGAAGATACAAACGTGCCCTTCT ACCCATGGGAGGTCATTCAGAAAGCAGAAGATGTTTTAAAACAACATGAT CAGATCTACCCACTGTATTTACAAGTCAACTTTCCACAGCTTCATGCCGA TTATCCAGAACAAGTACCAGAGGAATACAGGGACCGTGCCAAAAATATTC CATTCGAAGCAAGAAAAATCTATGCTGGACGTCCGAAAACAGCAGAGGAA TATAATTCTCGTTCGCAACCTTACGATTTATGGAATTATCTCGATATACA GAGTTACGTCATACGCGAAATTGGAAATGGTTGGGACGATGTTAGTTTCC ATGGCAACCCGGAGATACCAACGCCGAACATTGATCGTATAGCGAACCAT GGTGTTATCTTGCAACAGTATTATACCACACCTTACTGTGAAGATTCTGT AACAGCTTTCAAAACTGGAAAATTACCCATACATTATAATGATGATTAGT GGTTGTAAAACTTGTATACAAATGAGGACATTAGTTTTCACATTGATTTG TTTGATTAATTTTTGTTTGGGAGATTTTCAAGATGTGAAGAAGCCACCAC ACCCTCATATTATATTTGTCACGTTAAGGGATATGAATGGAAATTTTGTA CGGAATCTATGGTAACATTTCAGCTGTCAGAGTTGGCGATTTTAAATTAA TTCAAGGAGAAAGTTACGTGCCTTTTTCACAACGACCAATGGCGAAAGGA GAAATGAAAAACTTAGTACGTCCCTATACGATTTGGGACAGTGAATTAGA ATGCGCTAATTATCCGGACGCTATCGGTTGTTGGCCGGACATTGCGCCAT GTTTATTTAACGTTCGTTTTGATCCATGTGAGAATAATAATGTTGCTTAT TTCATGCCACAGACTGTCGAGGCTTTAGCGTATAGCCTTAAGAAATATCA AGATGGTGATATTTATCGGTCACGTAGAGATGTCAGCGAACAATTGGAAG TTGATTCCGAAAAATACCGCGAAATTTTAAAAAGGTTACGGAGGAGTGCG GAAGAGCTAAACGTTAAAGATATACGGAAATAAGACGAGTTTCATACGGA CTGATGCATATCACAGATTGGCTTCCGACCATTTTCCGATTAGCGGGCGG TAACCCGGAGCATGTCGTTGAGACAGATGGTATGGATATTTGGGATTCCA TCAATTCCGATGATTACTCACCAAGGCATGATCATGCAATTAGACAGAGC AGTCGGTCACCTCATTCGCATTCTTTACGACACTGGCATCCTTCACAATG CTATCCTCTTCTTCACCACAATCACTGGAGGTACCAAAGGAAATAACTTC TATACTTGGCCATCAACATACCCTTTCCGTGGTAGCAACGGAACAGTATG GGAAGGCGGTACCAGAGCGATTGGTTTTGTTTACAGCAACCGGATACAAA GACGAGATCGATTGCGAAGATACAAACGTGCCCTTCTACCCATGGGAGGT CATTCAGAAAGCAGAAGATGTTTTAAAACAACATGATCAGATCTACCCAC TGTATTTACAAGTCAACTTTCCACAGCTTCATGCCGATTATCCAGAACAA GTACCAGAGGAATACAGGGACCGTGCCAAAAATATTCCATTCGAAGCAAG AAAAATCTATGCTGGACGTCCGAAAACAGCAGAGGAATATAATTCTCGTT CGCAACCTTACGATTTATGGAATTATCTCGATATACAGAGTTACGTCATA CGCGAAATTGGAAATGGTTGGGACGATGTTAGTTTCCATGGCAACCCGGA GATACCAACGCCGAACATTGATCGTATAGCGAACCATGGTGTTATCTTGC AACAGTATTATACCACACCTTACTGTGAAGATTCTGTAACAGCTTTCAAA ACTGGAAAATTACCCATACATTATAATGATGATTAGTGGTTGTAAAACTT GTATACAAATGAGGACATTAGTTTTCACATTGATTTGTTTGATTAATTTT TGTTTGGGAGATTTTCAAGATGTGAAGAAGCCACCACACCCTCATATTAT ATTTGTCACGTTAAGGGATATGAATGGAAATTTTGTACGGAATCTATGGT AACATTTCAGCTGTCAGAGTTGGCGATTTTAAATTAATTCAAGGAGAAAG TTACGTGCCTTTTTCACAACGACCAATGGCGAAAGGAGAAATGAAAAACT TAGTACGTCCCTATACGATTTGGGACAGTGAATTAGAATGCGCTAATTAT CCGGACGCTATCGGTTGTTGGCCGGACATTGCGCCATGTTTATTTAACGT TCGTTTTGATCCATGTGAGAATAATAATGTTGCTTATTTCATGCCACAGA CTGTCGAGGCTTTAGCGTATAGCCTTAAGAAATATCAAGATGGTGATATT TATCGGTCACGTAGAGATGTCAGCGAACAATTGGAAGTTGATTCCGAAAA ATACCGCGAAATTTTAAAAAGGTTACGGAGGAGTGCGGAAGAGCTAAACG TTAAAGATATACGGAAATAAGACGAGTTTCATACGGACTGATGCATATCA CAGATTGGCTTCCGACCATTTTCCGATTAGCGGGCGGTAACCCGGAGCAT GTCGTTGAGACAGATGGTATGGATATTTGGGATTCCATCAATTCCGATGA TTACTCACCAAGGCATGATCATGCAATTAGACAGAGCAGTCGGTCACCTC ATTCGCATTCTTTACGACACTGGCATCCTTCACAATGCTATCCTCTTCTT CACCACAATCACTGGAGGTACCAAAGGAAATAACTTCTATACTTGGCCAT CAACATACCCTTTCCGTGGTAGCAACGGAACAGTATGGGAAGGCGGTACC AGAGCGATTGGTTTTGTTTACAGCAACCGGATACAAAGACGAGATCGATT GCGAAGATACAAACGTGCCCTTCTACCCATGGGAGGTCATTCAGAAAGCA GAAGATGTTTTAAAACAACATGATCAGATCTACCCACTGTATTTACAAGT CAACTTTCCACAGCTTCATGCCGATTATCCAGAACAAGTACCAGAGGAAT ACAGGGACCGTGCCAAAAATATTCCATTCGAAGCAAGAAAAATCTATGCT GGACGTCCGAAAACAGCAGAGGAATATAATTCTCGTTCGCAACCTTACGA TTTATGGAATTATCTCGATATACAGAGTTACGTCATACGCGAAATTGGAA ATGGTTGGGACGATGTTAGTTTCCATGGCAACCCGGAGATACCAACGCCG AACATTGATCGTATAGCGAACCATGGTGTTATCTTGCAACAGTATTATAC CACACCTTACTGTGAAGATTCTGTAACAGCTTTCAAAACTGGAAAATTAC CCATACATTATAATGATGATTAGTGGTTGTAAAACTTGTATACAAATGAG GACATTAGTTTTCACATTGATTTGTTTGATTAATTTTTGTTTGGGAGATT TTCAAGATGTGAAGAAGCCACCACACCCTCATATTATATTTGTCACGTTA AGGGATATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00008629-exon-sc0000086-1575043694:580950..581583 | TCONS_00008629-exon-sc0000086-1575043694:580950..581583 | Clytia hemisphaerica | exon |
TCONS_00008629-exon-sc0000086-1575043694:579707..579866 | TCONS_00008629-exon-sc0000086-1575043694:579707..579866 | Clytia hemisphaerica | exon |
TCONS_00008629-exon-sc0000086-1575043694:579227..579327 | TCONS_00008629-exon-sc0000086-1575043694:579227..579327 | Clytia hemisphaerica | exon |
TCONS_00008629-exon-sc0000086-1575043694:578378..578585 | TCONS_00008629-exon-sc0000086-1575043694:578378..578585 | Clytia hemisphaerica | exon |
TCONS_00008629-exon-sc0000086-1575043694:577883..578113 | TCONS_00008629-exon-sc0000086-1575043694:577883..578113 | Clytia hemisphaerica | exon |
TCONS_00008629-exon-sc0000086-1575043694:577294..577435 | TCONS_00008629-exon-sc0000086-1575043694:577294..577435 | Clytia hemisphaerica | exon |
TCONS_00008629-exon-sc0000086-1575043694:575997..576809 | TCONS_00008629-exon-sc0000086-1575043694:575997..576809 | Clytia hemisphaerica | exon |
TCONS_00008629-exon-sc0000086-1510915933:580950..581583 | TCONS_00008629-exon-sc0000086-1510915933:580950..581583 | Clytia hemisphaerica | exon |
TCONS_00008629-exon-sc0000086-1510915933:579707..579866 | TCONS_00008629-exon-sc0000086-1510915933:579707..579866 | Clytia hemisphaerica | exon |
TCONS_00008629-exon-sc0000086-1510915933:579227..579327 | TCONS_00008629-exon-sc0000086-1510915933:579227..579327 | Clytia hemisphaerica | exon |
TCONS_00008629-exon-sc0000086-1510915933:578378..578585 | TCONS_00008629-exon-sc0000086-1510915933:578378..578585 | Clytia hemisphaerica | exon |
TCONS_00008629-exon-sc0000086-1510915933:577883..578113 | TCONS_00008629-exon-sc0000086-1510915933:577883..578113 | Clytia hemisphaerica | exon |
TCONS_00008629-exon-sc0000086-1510915933:577294..577435 | TCONS_00008629-exon-sc0000086-1510915933:577294..577435 | Clytia hemisphaerica | exon |
TCONS_00008629-exon-sc0000086-1510915933:575997..576809 | TCONS_00008629-exon-sc0000086-1510915933:575997..576809 | Clytia hemisphaerica | exon |
TCONS_00008629-exon-sc0000086-1491911889:580950..581583 | TCONS_00008629-exon-sc0000086-1491911889:580950..581583 | Clytia hemisphaerica | exon |
TCONS_00008629-exon-sc0000086-1491911889:579707..579866 | TCONS_00008629-exon-sc0000086-1491911889:579707..579866 | Clytia hemisphaerica | exon |
TCONS_00008629-exon-sc0000086-1491911889:579227..579327 | TCONS_00008629-exon-sc0000086-1491911889:579227..579327 | Clytia hemisphaerica | exon |
TCONS_00008629-exon-sc0000086-1491911889:578378..578585 | TCONS_00008629-exon-sc0000086-1491911889:578378..578585 | Clytia hemisphaerica | exon |
TCONS_00008629-exon-sc0000086-1491911889:577883..578113 | TCONS_00008629-exon-sc0000086-1491911889:577883..578113 | Clytia hemisphaerica | exon |
TCONS_00008629-exon-sc0000086-1491911889:577294..577435 | TCONS_00008629-exon-sc0000086-1491911889:577294..577435 | Clytia hemisphaerica | exon |
TCONS_00008629-exon-sc0000086-1491911889:575997..576809 | TCONS_00008629-exon-sc0000086-1491911889:575997..576809 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000086 | supercontig | sc0000086:575997..581583 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0003824 | catalytic activity |
GO:0008484 | sulfuric ester hydrolase activity |
Vocabulary: Biological Process
Term | Definition |
GO:0008152 | metabolic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0008152 |
metabolic process |
molecular_function |
GO:0003824 |
catalytic activity |
molecular_function |
GO:0008484 |
sulfuric ester hydrolase activity |
Blast
BLAST of TCONS_00008629 vs. Swiss-Prot (Human)
Match: ARSI (Arylsulfatase I OS=Homo sapiens GN=ARSI PE=1 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 3.049e-48 Identity = 136/473 (28.75%), Postives = 204/473 (43.13%), Query Frame = 2
Query: 605 HIIFVTLRDMGWDDVSFHGNPEIPTPNIDRIANHGVILQQYYTTPYCEDSVTAFKTGKLPIH--------------------YRRPKTAEEYNSRSQPYDLWNY-----------LDIQSYVIREIGNID------CEDTNVPFY--------PWEV---------IQKAEDVLKQHDQIYPLYLQVNFPQLHADYPEQVPEEYRDRAKNIPFEARKIYAGMIMQLDRAVGHLIRILYDTGILHNAILFFTTITGGTKGNNFYTWPSTYPFRGSNGTVWEGGTRAIGFVYSNRIQRRGRVSYGLMHITDWLPTIFRLAGGNPEHVVETDGMDIWDSINSDDYSPRMEILYGI--------YGNI------------SAVRVGDFKLIQGE----SYVPFSQRPMAKGEMKNLVRPYTIWDSELECANYPDAIGCWPDIAPCLFNVRFDPCENNNVAYFMPQTVEALAYSLKKY 1789
HIIF+ D G+ DV +HG+ +I TP +DR+A GV L+ YY P C S + TG+ IH P+ +E + W+ +++ GN+D C+ V + W + Q+A +L H PL+L V F +H P Q P EY R + + AR+ YA M+ +D AV ++ L G +N+++ F++ GG ++ S +P RG GT WEGG R +GFV+S ++R+ R S LMHITDW PT+ LAGG DG D+W +I+ SPR EIL+ I +G++ +A+RVG++KL+ G+ ++P G NL R ++ A LFN+ DP E ++A P V L L +Y
Sbjct: 48 HIIFILTDDQGYHDVGYHGS-DIETPTLDRLAAKGVKLENYYIQPICTPSRSQLLTGRYQIHTGLQHSIIRPQQPNCLPLDQVTLPQKLQEAGYSTHMVGKWHLGFYRKECLPTRRGFDTFLGSLTGNVDYYTYDNCDGPGVCGFDLHEGENVAWGLSGQYSTMLYAQRASHILASHSPQRPLFLYVAFQAVHT--PLQSPREYLYRYRTMGNVARRKYAAMVTCMDEAVRNITWALKRYGFYNNSVIIFSSDNGGQT----FSGGSNWPLRGRKGTYWEGGVRGLGFVHSPLLKRKQRTSRALMHITDWYPTLVGLAGGTTSAADGLDGYDVWPAISEGRASPRTEILHNIDPLYNHAQHGSLEGGFGIWNTAVQAAIRVGEWKLLTGDPGYGDWIPPQTLATFPGSWWNLERMASV------------------RQAVWLFNISADPYEREDLAGQRPDVVRTLLARLAEY 495
The following BLAST results are available for this feature:
|